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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96558_cuf1 >transcript:BL96558_cuf1-protein ID=transcript:BL96558_cuf1-protein|Name=transcript:BL96558_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=175bp
WGVDFNNRAYANVLPTPTGREVCQVGLKGHSMCYAIQKEKRLCADDEIVC
LQSGKCIPECSVCDGIADCGDDDDIDERNCWFAGCPEKNRRMCNGDVGCY
SPSRVCDGEWNCGDDKEDERDCSDSCLRPGERGTFLRRDLVQCRDLKGCV
KIAKVCDGKRDCSDGSDETKCGKRV Run BLAST on NCBI mRNA from alignment at Sc0000047:1648803..1650791+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96558_cuf1 ID=transcript:BL96558_cuf1|Name=transcript:BL96558_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=1989bp|location=Sequence derived from alignment at Sc0000047:1648803..1650791+ (Branchiostoma lanceolatum)
TCTGGGGTGTAGACTTCAACAACCGTGCATATGCTAATGTCCTACCAACG
CCTACTGGTAGAGAAGTGTGCCAAGTGGGCTTAAAAGGACATTCGATGTG
CTACGCAATACAAAAGGGTATAGCCCTACTCTGTTGTCTGATCTAAAAAC
CTTTGCATGTCGTTTCAGCACTTGAAATGGCTTTATGTGTTTGTGGGTCA
TTGAGAGGTGTACAATCGTTATGAAATAGTGGAATTAGTCATAACATAGA
AAATTGCAATGCTGGCCTGTTTAAATCGCACTTAATGGCGGCACGGCCAA
CATCTTTGTTCTAACATTCTTGATTTTCTAATCAAGTTTGATTCACTTTT
GCTTGAACATTCATCTGTGTTGCGCATCGAAGAAGGGAATAAGCACTCCG
TTAAATATCAATAAAAGCCATGTTGGAATAGTTTTGTGGTCGGAAATTCT
TATCTTGGTATAACGGTTAGCGTTTCATACTAGATACTGGGATGTGTGAA
AAATGTTTGTCACACGGGGAGCGGTGAATTTTCTTATCATATTCAGTTGC
TATGATTTCGTATTTGCTATTTTGAATAGTGTACTGTATCGACAATATTT
TCCTAATTGATCTAACATAAGTAATTTTTGCCATCAGAGAAACGTCTATG
TGCAGACGACGAGATCGTTTGTCTCCAAAGCGGAAAATGTATCCCAGAAT
GCAGTGTGTGTGACGGCATCGCGGACTGTGGGGACGATGACGACATCGAC
GAACGAAACTGCTGTACGCTGATCACGTCGCTCTTGCTTGTTTCTGTACT
GTGTGATTAAAAGTTAACATCTCGAAATTTTACATCAAGAAACGACACCA
AACTCATGATTAGTATAAGAACCAATTGTTGATAAATGGAGCGGAGATTT
TTTTTAACAATATGTATGTAGACTCTTTCCCAGGGGGTAAATTATTTACA
ATTCATACAAACAGCCATATGTCTATCTATATTTCTATTTATCAATGGTC
CTCTCTTTATAGATGTAACATATTTGAATAGTCCTATCATGTAGTGTATT
GTGTTTATTAGATTTCCTTATCAATTATGCAAATTAGATCATGATTTGCA
TAACAAGAATCACACAAACAGATTTCCATTTAAAAAACTGGCTTTCCAAA
ATAAGCAATGAAGAAATACAGGGAATGATTTTACCTTGTCTTGCATGTCT
TTGATGATTCATTGTGGTCCTCTTAGTTCAATCGTTCAATGTTTCATCCT
TTTTATACTATTCTGTGAGTGGGCTGATTCGTTAAGCATGTTGCTTGTCA
TAAAAACTGACATATCAAACCTTATGATTCTTAGTATTTATTATCCTCTC
CATGTGTTCTGTATAGGTGACGCCGTTTAGGAGATTTTGGTACTTAAATT
CAAAATTCACCCCCTTCATCGTTTCCAGGGTTTGCCGGCTGCCCAGAAAA
GAACAGACGAATGTGTAACGGAGATGTGGGCTGCTACAGTCCCAGCCGCG
TGTGCGACGGTGAATGGAACTGTGGGGACGACAAGGAGGACGAGCGGGAC
TGTAGCGGTATGGTTTAGTTCTACACGATCTACAGAGAAACCGCCATGTG
AAAGACCACTGTCCGATATTGTGGCTGGTGACCCCCCCCCCCGCAGTCTG
AATAGCGCTTGACTCACTGCATTTTCGATAAGACGTTTAATCCTCATCAA
CATAGCTAATCCGGGTCAAAAGCTTTTGCGAAATTGGCATCTTCCCCCTT
CTTATACTTTGACACACGTACACATGATAGACCAACTGTCAATAAGGAGT
GACACTTATGAGCTGTGCACGCTAACTTTGCAGACAGCTGCTTAAGACCA
GGCGAGCGGGGTACATTTCTTCGGCGAGACCTTGTCCAGTGCCGTGATCT
GAAAGGCTGTGTTAAGATCGCAAAGGTTTGTGATGGCAAGAGGGACTGCT
CAGACGGATCCGACGAGACCAAATGTGGTAAGAGGGTTG Coding sequence (CDS) from alignment at Sc0000047:1648803..1650791+ >transcript:BL96558_cuf1 ID=transcript:BL96558_cuf1|Name=transcript:BL96558_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=2100bp|location=Sequence derived from alignment at Sc0000047:1648803..1650791+ (Branchiostoma lanceolatum)
TGGGGTGTAGACTTCAACAACCGTGCATATGCTAATGTCCTACCAACGCC
TACTGGTAGAGAAGTGTGCCAAGTGGGCTTAAAAGGACATTCGATGTGCT
ACGCAATACAAAAGGAGAAACGTCTATGTGCAGACGACGAGATCGTTTGT
CTCCAAAGCGGAAAATGTATCCCAGAATGCAGTGTGTGTGACGGCATCGC
GGACTGTGGGGACGATGACGACATCGACGAACGAAACTGCTGGTTTGCCG
GCTGCCCAGAAAAGAACAGACGAATGTGTAACGGAGATGTGGGCTGCTAC
AGTCCCAGCCGCGTGTGCGACGGTGAATGGAACTGTGGGGACGACAAGGA
GGACGAGCGGGACTGTAGCGACAGCTGCTTAAGACCAGGCGAGCGGGGTA
CATTTCTTCGGCGAGACCTTGTCCAGTGCCGTGATCTGAAAGGCTGTGTT
AAGATCGCAAAGGTTTGTGATGGCAAGAGGGACTGCTCAGACGGATCCGA
CGAGACCAAATGTGGTAAGAGGGTTTGGGGTGTAGACTTCAACAACCGTG
CATATGCTAATGTCCTACCAACGCCTACTGGTAGAGAAGTGTGCCAAGTG
GGCTTAAAAGGACATTCGATGTGCTACGCAATACAAAAGGAGAAACGTCT
ATGTGCAGACGACGAGATCGTTTGTCTCCAAAGCGGAAAATGTATCCCAG
AATGCAGTGTGTGTGACGGCATCGCGGACTGTGGGGACGATGACGACATC
GACGAACGAAACTGCTGGTTTGCCGGCTGCCCAGAAAAGAACAGACGAAT
GTGTAACGGAGATGTGGGCTGCTACAGTCCCAGCCGCGTGTGCGACGGTG
AATGGAACTGTGGGGACGACAAGGAGGACGAGCGGGACTGTAGCGACAGC
TGCTTAAGACCAGGCGAGCGGGGTACATTTCTTCGGCGAGACCTTGTCCA
GTGCCGTGATCTGAAAGGCTGTGTTAAGATCGCAAAGGTTTGTGATGGCA
AGAGGGACTGCTCAGACGGATCCGACGAGACCAAATGTGGTAAGAGGGTT
TGGGGTGTAGACTTCAACAACCGTGCATATGCTAATGTCCTACCAACGCC
TACTGGTAGAGAAGTGTGCCAAGTGGGCTTAAAAGGACATTCGATGTGCT
ACGCAATACAAAAGGAGAAACGTCTATGTGCAGACGACGAGATCGTTTGT
CTCCAAAGCGGAAAATGTATCCCAGAATGCAGTGTGTGTGACGGCATCGC
GGACTGTGGGGACGATGACGACATCGACGAACGAAACTGCTGGTTTGCCG
GCTGCCCAGAAAAGAACAGACGAATGTGTAACGGAGATGTGGGCTGCTAC
AGTCCCAGCCGCGTGTGCGACGGTGAATGGAACTGTGGGGACGACAAGGA
GGACGAGCGGGACTGTAGCGACAGCTGCTTAAGACCAGGCGAGCGGGGTA
CATTTCTTCGGCGAGACCTTGTCCAGTGCCGTGATCTGAAAGGCTGTGTT
AAGATCGCAAAGGTTTGTGATGGCAAGAGGGACTGCTCAGACGGATCCGA
CGAGACCAAATGTGGTAAGAGGGTTTGGGGTGTAGACTTCAACAACCGTG
CATATGCTAATGTCCTACCAACGCCTACTGGTAGAGAAGTGTGCCAAGTG
GGCTTAAAAGGACATTCGATGTGCTACGCAATACAAAAGGAGAAACGTCT
ATGTGCAGACGACGAGATCGTTTGTCTCCAAAGCGGAAAATGTATCCCAG
AATGCAGTGTGTGTGACGGCATCGCGGACTGTGGGGACGATGACGACATC
GACGAACGAAACTGCTGGTTTGCCGGCTGCCCAGAAAAGAACAGACGAAT
GTGTAACGGAGATGTGGGCTGCTACAGTCCCAGCCGCGTGTGCGACGGTG
AATGGAACTGTGGGGACGACAAGGAGGACGAGCGGGACTGTAGCGACAGC
TGCTTAAGACCAGGCGAGCGGGGTACATTTCTTCGGCGAGACCTTGTCCA
GTGCCGTGATCTGAAAGGCTGTGTTAAGATCGCAAAGGTTTGTGATGGCA
AGAGGGACTGCTCAGACGGATCCGACGAGACCAAATGTGGTAAGAGGGTT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000047 | genome | Sc0000047:1648803..1650791 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96558_cuf1 |
| Biotype | protein_coding |
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