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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96431_cuf1 >transcript:BL96431_cuf1-protein ID=transcript:BL96431_cuf1-protein|Name=transcript:BL96431_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=362bp
PCKACECDLVGTNFDPYLPTTTQSALGQTTVLGLTTTQDATVEATSQGAL
VGTTPIQGITVDTTLQAETTDIATTTNATTTNVTSSATTSDPGTTNVTTM
QSETTDIATTVATTNATIVATTNATTVTTTNATTEAATIVATTNATTVAT
TNATTVATTNATTVATTNGGGPTTVATTNATTVATTNATTVATTNATTVA
TTNATTVATADATTVATTNATTVGLGTTNLTTVQTDTTETATAATTTNDT
FDVFVTTEVVTTDNETAVTENVTTAAPLTTDGVTEVSTNATETNATNSGT
GRLVEEGFQARQRRQLPDNTQQSTTVSSPLDTTATPPVGSTPAPGATIFT
GNHTCQRTTGQC Run BLAST on NCBI mRNA from alignment at Sc0000019:1958945..1962271- Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96431_cuf1 ID=transcript:BL96431_cuf1|Name=transcript:BL96431_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=3327bp|location=Sequence derived from alignment at Sc0000019:1958945..1962271- (Branchiostoma lanceolatum)
CCCTGCAAAGGTGAGAAACAGCAGGCCAAAGAAGTTAAATTTTTCTTTGT
AACGTCTGTCAAAAACTTGAAATCTTATATGCTGGAGTGTGATATCAAAC
ATTTGGGTCCTTTTGCGATAGGACATTTCATGACAAATGTTCTATTTTTT
AGAATTTTGAATCTCTCATATAATGCTATTAAGTAGAGTTAATTGACTTG
GAGAAAACTGTTTGTTTTGCATTATAGTTATACCAGTAAACAGCAACAAA
AACACCAGTTTTGTACAAACTGTTAAGACCGTACTAATAGGTTTGAGCCA
CATACAATGGGGCAGACACCTACCCTTAGCAATATGTGTGGTGGATTCTC
TAATGTGCTTGAAGTGTGGCCCTCCTCAAACACAGGACATCAGTTTCTAA
GGTGCAAGCATAGTCATGAACTGTGATATCTAACATACTATGTCTCTCGT
TCTTCCAGCGTGTGAGTGTGACCTTGTTGGCACAAACTTCGACCCCTACC
TGCCGACCACCACCCAGAGTGCACTGGGGCAGACAACAGTGCTGGGACTC
ACAACTACCCAAGATGCAACAGTAGAAGCAACTTCCCAGGGTGCACTTGT
TGGGACAACTCCAATCCAAGGCATAACAGTTGACACAACATTGCAGGCAG
AAACCACTGACATCGCTACAACCACAAATGCTACAACCACAAATGTTACA
TCATCTGCTACTACTAGTGACCCTGGAACAACCAATGTAACAACGATGCA
GTCAGAAACTACTGACATCGCTACAACTGTAGCCACTACAAACGCTACAA
TTGTAGCCACTACAAATGCTACAACTGTAACCACTACCAATGCTACAACT
GAAGCTGCTACAATTGTAGCCACTACAAACGCTACAACTGTAGCCACTAC
AAACGCTACAACTGTAGCCACTACAAACGCTACAACTGTAGCCACTACAA
ACGGCGGCGGGCCTACAACTGTAGCCACTACAAACGCTACAACTGTAGCC
ACTACAAATGCTACAACTGTAGCCACTACAAATGCTACAACTGTAGCCAC
TACAAATGCTACAACTGTAGCCACTGCAGATGCTACAACTGTAGCCACTA
CAAATGCTACAACTGTTGGCCTGGGAACAACTAATCTCACAACAGTGCAG
ACAGACACAACTGAAACAGCTACAGCTGCAACCACCACCAATGATACATT
TGATGTGTTTGTAACAACAGAAGTTGTCACCACTGACAATGAGACTGCTG
TAACAGAGAATGTAACAACTGCAGCACCTCTGACTACAGATGGTGTAACT
GAAGTCTCCACAAATGCTACAGAGACAAATGCAACAAACAGCGGGACAGG
GAGGTTGGTGGAGGAAGGTTTTCAGGCCAGACAGAGAAGACAACTGCCGG
ACAACACACAGCAAAGTACCACAGTTAGCTCACCTCTAGACACCACAGGT
ATAGCCACCACATTGTTACACCCCACAGGTAGTACCCGCACACCTGGTCA
TCCCCAAGCCTCAACCATTGCATCTGAAGGTACTGCAAGTACTACCCCTA
CATCTATGAATCCCACGGGTACAACACCTGATCATGATCCAACCCCTACA
TCAAATAATACCACTAGAACATCACCTGATCCAACCCCCACAACCACAGA
TCCCACTACTACATCACCTGATATAACCCCTACAACCACAGATCCCACTA
GTACAACACCTGATCCAACCCTTACAACCACAGATCCCGCTAGTACAGCA
CCAGATCCAACCCTTACAACCACAGATCCCACTAGTACAACACCTGATTC
AACCCCTACATCTACAGATCCCGCTAGCACATCACCTGATCCAACCCCTA
CATCAATGGATCCCACTAGTACAGTGCCTGATCCAACCTCTACATCCATA
AATCTCACTAGTACAGTGCCTAATCCAACCCCTACATCCACGAATCTCAC
TAGTACAGTGCCTGATCCAACCCCTACATCCATGAATCTCACTAGTACAG
TGCCTGATCCAACCCCTACATCCATGAATCTCACTAGTACAGTGCCTGAT
CCAACCCCTACATCCATGAATCTCACTAGTACAGTGCCTGATCCAACCCC
TACATCCATGAATCTCACTAGTACAGTGCCTGATCCAACCCCTACATCCA
TGAATCTCACTAGTACAGTGCCTGATCCAACCCCTACATCCATGAATCTC
ACTAGTACAGTGCCTGATCCAACCCCTACATCCATGAATCTCACTAGTAC
AGTGCCTGATCCAACCCCTACATCCATGAATCTCACTAGTACAGTGCCTG
ATCCAACCCCTACATCCATGAATCTCACTAGTACAGTGCCTGATCCAACC
CCTACATCCATGAATCTCACTAGTACAGTGCCTGATCCAACCCCTACATC
CATGAATCTCACTAGTACAGTGCCTGATCCAACCCCTACATCCATGAATC
TCACTAGTACAGTGCCTGATCCAACCCCTACATCCATGAATCTCACTAGT
ACAGTGCCTGATCCAACCCCTACATCCATGAATCTCACTAGTACAGTGCC
TGATCCAACCCCTACATCCATGAATCTCACTAGTACAGTGCCTGATCCAA
CCCCTACATCCATGAATCTCACTAGTACAGTGCCTGATCCAACCCCTACA
TCCATGAATCTCACTAGTACAGTGCCTGATCCAACCCCTACATCCATGAA
TCTCACTAGTACAGTGCCTGATCCAACCCCTACATCCATGAATCTCACTA
GTACAGTGCCTGATCCAACCCCTACATCCACGAATCTCACTAGTACAGTG
CCTGATCCAACCCCTACATCCATGAATCCCACTAGTACAGTGCCTGATCC
AACCTCTACATCCATGGATCCCACTAGTATAGTGCCTGATCCAACCCCTA
CATCCACGGATCCCACTAGTACAAGGCCTGATCCAACCCCTACATCCACG
AATCTCACTAGTACAGTGCCTGATCCAACTCCTACATCCATGAATCTCAC
TAGTACAGGGCCTGATCCAACCCCTATATCCATGGATCCCACTAGTACGG
TGCCTGATCCAACCTCTACATCCATGAATCTCACTAGTACAGTTAGCACA
ACACCTGATGCAACCACGGCACCTGTACCTACAACATCTGCACCTGTAGT
TTCACCAATCTCCACCCCTGGATCCGTAGTTCCCACCCTTCCACCTCCCA
ATGCCACGTCAGTAACACCTGTCTCTGGACATACCACAGCTACACCACCT
GTAGGTTCCACCCCTGCACCTGGAGCCACCATCTTCACAGGTAACCACAC
CTGCCAAAGGACCACGGGACAGTGCAG Coding sequence (CDS) from alignment at Sc0000019:1958945..1962271- >transcript:BL96431_cuf1 ID=transcript:BL96431_cuf1|Name=transcript:BL96431_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=3258bp|location=Sequence derived from alignment at Sc0000019:1958945..1962271- (Branchiostoma lanceolatum)
CCCTGCAAAGCGTGTGAGTGTGACCTTGTTGGCACAAACTTCGACCCCTA
CCTGCCGACCACCACCCAGAGTGCACTGGGGCAGACAACAGTGCTGGGAC
TCACAACTACCCAAGATGCAACAGTAGAAGCAACTTCCCAGGGTGCACTT
GTTGGGACAACTCCAATCCAAGGCATAACAGTTGACACAACATTGCAGGC
AGAAACCACTGACATCGCTACAACCACAAATGCTACAACCACAAATGTTA
CATCATCTGCTACTACTAGTGACCCTGGAACAACCAATGTAACAACGATG
CAGTCAGAAACTACTGACATCGCTACAACTGTAGCCACTACAAACGCTAC
AATTGTAGCCACTACAAATGCTACAACTGTAACCACTACCAATGCTACAA
CTGAAGCTGCTACAATTGTAGCCACTACAAACGCTACAACTGTAGCCACT
ACAAACGCTACAACTGTAGCCACTACAAACGCTACAACTGTAGCCACTAC
AAACGGCGGCGGGCCTACAACTGTAGCCACTACAAACGCTACAACTGTAG
CCACTACAAATGCTACAACTGTAGCCACTACAAATGCTACAACTGTAGCC
ACTACAAATGCTACAACTGTAGCCACTGCAGATGCTACAACTGTAGCCAC
TACAAATGCTACAACTGTTGGCCTGGGAACAACTAATCTCACAACAGTGC
AGACAGACACAACTGAAACAGCTACAGCTGCAACCACCACCAATGATACA
TTTGATGTGTTTGTAACAACAGAAGTTGTCACCACTGACAATGAGACTGC
TGTAACAGAGAATGTAACAACTGCAGCACCTCTGACTACAGATGGTGTAA
CTGAAGTCTCCACAAATGCTACAGAGACAAATGCAACAAACAGCGGGACA
GGGAGGTTGGTGGAGGAAGGTTTTCAGGCCAGACAGAGAAGACAACTGCC
GGACAACACACAGCAAAGTACCACAGTTAGCTCACCTCTAGACACCACAG
CTACACCACCTGTAGGTTCCACCCCTGCACCTGGAGCCACCATCTTCACA
GGTAACCACACCTGCCAAAGGACCACGGGACAGTGCCCCTGCAAAGCGTG
TGAGTGTGACCTTGTTGGCACAAACTTCGACCCCTACCTGCCGACCACCA
CCCAGAGTGCACTGGGGCAGACAACAGTGCTGGGACTCACAACTACCCAA
GATGCAACAGTAGAAGCAACTTCCCAGGGTGCACTTGTTGGGACAACTCC
AATCCAAGGCATAACAGTTGACACAACATTGCAGGCAGAAACCACTGACA
TCGCTACAACCACAAATGCTACAACCACAAATGTTACATCATCTGCTACT
ACTAGTGACCCTGGAACAACCAATGTAACAACGATGCAGTCAGAAACTAC
TGACATCGCTACAACTGTAGCCACTACAAACGCTACAATTGTAGCCACTA
CAAATGCTACAACTGTAACCACTACCAATGCTACAACTGAAGCTGCTACA
ATTGTAGCCACTACAAACGCTACAACTGTAGCCACTACAAACGCTACAAC
TGTAGCCACTACAAACGCTACAACTGTAGCCACTACAAACGGCGGCGGGC
CTACAACTGTAGCCACTACAAACGCTACAACTGTAGCCACTACAAATGCT
ACAACTGTAGCCACTACAAATGCTACAACTGTAGCCACTACAAATGCTAC
AACTGTAGCCACTGCAGATGCTACAACTGTAGCCACTACAAATGCTACAA
CTGTTGGCCTGGGAACAACTAATCTCACAACAGTGCAGACAGACACAACT
GAAACAGCTACAGCTGCAACCACCACCAATGATACATTTGATGTGTTTGT
AACAACAGAAGTTGTCACCACTGACAATGAGACTGCTGTAACAGAGAATG
TAACAACTGCAGCACCTCTGACTACAGATGGTGTAACTGAAGTCTCCACA
AATGCTACAGAGACAAATGCAACAAACAGCGGGACAGGGAGGTTGGTGGA
GGAAGGTTTTCAGGCCAGACAGAGAAGACAACTGCCGGACAACACACAGC
AAAGTACCACAGTTAGCTCACCTCTAGACACCACAGCTACACCACCTGTA
GGTTCCACCCCTGCACCTGGAGCCACCATCTTCACAGGTAACCACACCTG
CCAAAGGACCACGGGACAGTGCCCCTGCAAAGCGTGTGAGTGTGACCTTG
TTGGCACAAACTTCGACCCCTACCTGCCGACCACCACCCAGAGTGCACTG
GGGCAGACAACAGTGCTGGGACTCACAACTACCCAAGATGCAACAGTAGA
AGCAACTTCCCAGGGTGCACTTGTTGGGACAACTCCAATCCAAGGCATAA
CAGTTGACACAACATTGCAGGCAGAAACCACTGACATCGCTACAACCACA
AATGCTACAACCACAAATGTTACATCATCTGCTACTACTAGTGACCCTGG
AACAACCAATGTAACAACGATGCAGTCAGAAACTACTGACATCGCTACAA
CTGTAGCCACTACAAACGCTACAATTGTAGCCACTACAAATGCTACAACT
GTAACCACTACCAATGCTACAACTGAAGCTGCTACAATTGTAGCCACTAC
AAACGCTACAACTGTAGCCACTACAAACGCTACAACTGTAGCCACTACAA
ACGCTACAACTGTAGCCACTACAAACGGCGGCGGGCCTACAACTGTAGCC
ACTACAAACGCTACAACTGTAGCCACTACAAATGCTACAACTGTAGCCAC
TACAAATGCTACAACTGTAGCCACTACAAATGCTACAACTGTAGCCACTG
CAGATGCTACAACTGTAGCCACTACAAATGCTACAACTGTTGGCCTGGGA
ACAACTAATCTCACAACAGTGCAGACAGACACAACTGAAACAGCTACAGC
TGCAACCACCACCAATGATACATTTGATGTGTTTGTAACAACAGAAGTTG
TCACCACTGACAATGAGACTGCTGTAACAGAGAATGTAACAACTGCAGCA
CCTCTGACTACAGATGGTGTAACTGAAGTCTCCACAAATGCTACAGAGAC
AAATGCAACAAACAGCGGGACAGGGAGGTTGGTGGAGGAAGGTTTTCAGG
CCAGACAGAGAAGACAACTGCCGGACAACACACAGCAAAGTACCACAGTT
AGCTCACCTCTAGACACCACAGCTACACCACCTGTAGGTTCCACCCCTGC
ACCTGGAGCCACCATCTTCACAGGTAACCACACCTGCCAAAGGACCACGG
GACAGTGC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000019 | genome | Sc0000019:1958945..1962271 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96431_cuf1 |
| Biotype | protein_coding |
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