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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96184_cuf1 >transcript:BL96184_cuf1-protein ID=transcript:BL96184_cuf1-protein|Name=transcript:BL96184_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=122bp
MQSLDKPPDGGWGWMVVLSTFLIHVVDVGSYRSMGVFYVEFREVFQESAG
NTSFISSVFIGTILMCSPIASALTNLTSCRTVVMAGGVISAVGLGLSYFA
QNVVHLIITIGLITGFGVSLTY Run BLAST on NCBI mRNA from alignment at Sc0000026:2032340..2034243+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96184_cuf1 ID=transcript:BL96184_cuf1|Name=transcript:BL96184_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=1904bp|location=Sequence derived from alignment at Sc0000026:2032340..2034243+ (Branchiostoma lanceolatum)
GGCAAGAAAGCTTTGTGAAAACGTAGCCATGCATTATGAACAATTGTTAT
CTCACGGTCAGAGGCCAAGGATGTGCAATGACTTTAAGCGCAATGACCTT
TGGTATCTCTTGGTGCATATAAATTGTGACTATGCATTAATGGAGTGAAG
CTATGACTTGTCACTTGCACACAGAAAATTGCATATTCTAAAATAAAAAC
CAAGTTCACGCATTTGTTTTTCTCATTTAGCATTTTGTCTTGCTGTCATC
CTACAGAATCAGGTCTTTGGCAGGACATACAGTATCCTTGATGCAGTCAT
TGGATAAACCGCCAGATGGCGGTTGGGGGTGGATGGTGGTGTTGAGCACG
TTTCTCATACACGTCGTCGATGTAGGATCTTACAGGTCCATGGGAGTATT
CTACGTGGAGTTCCGAGAGGTTTTCCAAGAAAGCGCGGGAAACACGTCCT
TTATCAGTTCTGTCTTCATAGGTACCATATTGATGTGCTGTGAGTATAAC
AAGTACTTCAAAATATATCATTCAAACTAAAAACTCGTAAATATCTAACC
TTCGACTAGTTTTCTGGCCTTCAGGAAAAAGTATTGATCATAAAGAGAAG
AATACCAGAGGACTGGTGCAAAATTGGTAGAGTCCAATCTTTGTTTATGT
TTGTTTCTTTCTTTTGTTTGAAAATAAATTGTTGCGAAAAGAATTGAACT
TTTTACATAACCCTGTATACCCAAACAGGCAAACTTCCATATCTACCCAA
AGTACCATAACTACATGGAAAGCAATTCTACATAAGCTTTAAATTTACCT
CAGTTTTCCAGGCGAAGTTTTATTGACAAAAAGGCAGTGATGATAATACT
TTCAATACAAATCTGTCATTGACACAATGATGTAAATTCTAAATCAATCA
ATCAATAAATCAACCAACCAATCAATCAATCAATCAATAAGTAAATAAAT
AAATAGATAAATCAGTATGCCAGTTAATTGATAAATAAATTAATCAATGT
TTGTGCAATGGTCAAAGCCAAATTGCATTATTGCAAAAGACCAAGACATT
ATATGTAAGCTGGAATCAAACTTTAACTTTCGTGATCACTTTTACTCTTG
ACGTTTATCACAGCTCCCATCGCCAGTGCCCTGACCAACTTGACCAGCTG
TCGTACCGTCGTCATGGCAGGGGGCGTCATTTCCGCCGTGGGACTCGGCC
TCAGCTACTTCGCACAGAACGTTGTACACCTGATCATAACTATTGGACTG
ATAACAGGTCTGTATGTAATATCTGACGTTTGAGACCGCATTGTAAACAC
CGCGTGAACTACCAATGTATATCTGTAAAAACCTTACGTTTGGAACCGCA
TCTGTAAGCAGCGACCCCTGTAGCTGCAGTTCGTAATAAATCGGTCAGAA
TTGCCATGAGGAAGGTGACAGACGGTCACCGAAACTTCGGTCTTGAATGA
AATGAATCTATTTATTGGAGTCTGTTTATTGGCTGTCTCGATCTTTTGGA
TGACTATAAAATTCACACTGTGGCATATACAACTAAACACATAAACATAG
CCTAACGTGGTTATGTTTGAAGGCAAAATCATATGGTTTCCTACTTCCCA
ATCTGCCGTCTTAAGCTAGAAAACGTTAAGAAATTGCATTGAAACATCTG
CTTTGAGATATCTTATGATTACTCTCACTGTACAAATTACAAAAGCAATA
GATTTTGTTATCGGTCAAACGTTTCAGGTAGCATTTGCTACCTTTCTTCT
GTGTTCAATGTTTCATACGTTGTAATAAATTGGTAGAGCAGCCTGTTGTG
CAATACTAATCTTTAAAAAAAACAGGTTTATATTTACATATCGGTTTGTT
GAATTATCGTTGTGATTTTGTTTCTTGCAGGGTTTGGGGTCTCCCTGACG
TACT Coding sequence (CDS) from alignment at Sc0000026:2032340..2034243+ >transcript:BL96184_cuf1 ID=transcript:BL96184_cuf1|Name=transcript:BL96184_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1098bp|location=Sequence derived from alignment at Sc0000026:2032340..2034243+ (Branchiostoma lanceolatum)
ATGCAGTCATTGGATAAACCGCCAGATGGCGGTTGGGGGTGGATGGTGGT
GTTGAGCACGTTTCTCATACACGTCGTCGATGTAGGATCTTACAGGTCCA
TGGGAGTATTCTACGTGGAGTTCCGAGAGGTTTTCCAAGAAAGCGCGGGA
AACACGTCCTTTATCAGTTCTGTCTTCATAGGTACCATATTGATGTGCTC
TCCCATCGCCAGTGCCCTGACCAACTTGACCAGCTGTCGTACCGTCGTCA
TGGCAGGGGGCGTCATTTCCGCCGTGGGACTCGGCCTCAGCTACTTCGCA
CAGAACGTTGTACACCTGATCATAACTATTGGACTGATAACAGGGTTTGG
GGTCTCCCTGACGTACATGCAGTCATTGGATAAACCGCCAGATGGCGGTT
GGGGGTGGATGGTGGTGTTGAGCACGTTTCTCATACACGTCGTCGATGTA
GGATCTTACAGGTCCATGGGAGTATTCTACGTGGAGTTCCGAGAGGTTTT
CCAAGAAAGCGCGGGAAACACGTCCTTTATCAGTTCTGTCTTCATAGGTA
CCATATTGATGTGCTCTCCCATCGCCAGTGCCCTGACCAACTTGACCAGC
TGTCGTACCGTCGTCATGGCAGGGGGCGTCATTTCCGCCGTGGGACTCGG
CCTCAGCTACTTCGCACAGAACGTTGTACACCTGATCATAACTATTGGAC
TGATAACAGGGTTTGGGGTCTCCCTGACGTACATGCAGTCATTGGATAAA
CCGCCAGATGGCGGTTGGGGGTGGATGGTGGTGTTGAGCACGTTTCTCAT
ACACGTCGTCGATGTAGGATCTTACAGGTCCATGGGAGTATTCTACGTGG
AGTTCCGAGAGGTTTTCCAAGAAAGCGCGGGAAACACGTCCTTTATCAGT
TCTGTCTTCATAGGTACCATATTGATGTGCTCTCCCATCGCCAGTGCCCT
GACCAACTTGACCAGCTGTCGTACCGTCGTCATGGCAGGGGGCGTCATTT
CCGCCGTGGGACTCGGCCTCAGCTACTTCGCACAGAACGTTGTACACCTG
ATCATAACTATTGGACTGATAACAGGGTTTGGGGTCTCCCTGACGTAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000026 | genome | Sc0000026:2032340..2034243 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96184_cuf1 |
| Biotype | protein_coding |
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