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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96182_cuf8 >transcript:BL96182_cuf8-protein ID=transcript:BL96182_cuf8-protein|Name=transcript:BL96182_cuf8|organism=Branchiostoma lanceolatum|type=polypeptide|length=166bp
RRTPSRIGQDKLSPEKFDPASLFTKPQIAGREIRMIKIKKEKDTDVGVTV
EGGIDSVLGGKVIVTEVWDGGLAHRHGGLYKGDQIMNCNGRTMLDIKLAR
AQEILREEMKAAGDSLTLVIAVAPPKAYEDEVKKLTHTLAMGDIQEEPIS
EHPTWVLKEDIQVTII Run BLAST on NCBI mRNA from alignment at Sc0000026:54909..59124+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96182_cuf8 ID=transcript:BL96182_cuf8|Name=transcript:BL96182_cuf8|organism=Branchiostoma lanceolatum|type=mRNA|length=4216bp|location=Sequence derived from alignment at Sc0000026:54909..59124+ (Branchiostoma lanceolatum)
TGAGAAGAACACCCTCCAGGATTGGCCAGGACAAACTGTCGCCAGAGAAG
TTCGACCCTGCCAGTCTGGTCAGTCCCCCTATTCTATATATTTATGTTTG
CTGACTTTTAGACTGGGTGTATATAAGAGTAGAGAAAGTTGTGCAAGAAT
GCCTACTGAGTTTTCTAGATGATCGATACAAAAACAATGATAAACTTACA
TGTGTTTATTGCAGGCTTTTCCTTTTTTTCTAGGATAATATATTTACCGG
ACATTTGTTCCATTATCTTTTGAGTCAGATCAGTTATTTGCATGACCAGG
AAGTAGTGAGTAATGTACAGCATAATAAAGGCTGAGGATGTGAGGTATTC
ATTTCCGATGGTCTGTATTCTTCACAGTTCACCAAACCTCAGATTGCAGG
GAGGGAGATCAGGATGATCAAGATCAAAAAGGAGAAAGTAAGAATCAATA
ACTTAAAGTCATTCAATATTTCTTCCATGATCATGTGTTTTCAGACTTGT
GTTTTCTTCCATTTACTAGCTTAAAGATTTGTATATTTATCAATTATTTA
TTCCAAGATGATGCTTGACATCAAAACAAACTATGGACAAGAGATAATCT
ATATTCAATTTGATGTGTATGATTTATGAACACCTGACTGCTTTGCAGTA
ATTTCTGATTAAAAATGTGTGTTTCTTTGTTTCCAGGACACAGATGTGGG
TGTGACAGTGGAGGGAGGGATTGACTCGGTGCTAGGAGGAAAGGTCATTG
TGACAGAGGTGTGGGACGGAGGGCTGGCACACAGACATGGTGAGGAGTAC
TATAGGAAGTGACAGACATTGTGATTTTTCCAGGGGATTGAGGAGAATGG
TGATTTTCAAACTTACTTAGATTTTTCAGCTATAATTGTTACTTTTTGCC
CCCAAGAAAGTTTTGATTTCACCAGTGTTTCGAGTGTGATTCTGATTATA
AACGATAAGAAATTTAATTTGGGAAGATCAGGATCCAGATATACTTTTGA
AAGATTGGCATCCACTATAGGACATATGACTCTGCTAAGGGATTTTCTTT
CAAACTGCAGATTATAAAGAGTTGTATTAGTCTAGTCAAAAATCCTGTGG
TTTGGATGGGATTCGATCCCGTAACCTTGTGTATTTTATGTTCAAGGTGG
CCTGTACAAGGGAGACCAGATCATGAACTGTAACGGACGCACCATGCTGG
ACATCAAGCTGGCCCGTGCACAGGAGATCCTCCGGGAAGAGATGAAGGCT
GCTGGGGTAAGGACTCTAAAGGAGCGACCATATTTCCTGAATGTGCAACA
GTTACTGCATAATCCTTATTGTGCAATTCCATATACTGATGTGCAACTTT
TGTGTGCTGATGTCTCAATGAGCAACTGTATTAGATAGTCCTGATGTACA
ACTTTAGTGTGCATGTATTGATGCACAAGTATATGCATAAGAACTATTCA
TTGATGATGATGATATTTATAATCTGCACTTGCATTTCCTGATGTGCATG
TCAAAGCGTTCTGCACCTTAAAGCATTGATGAGCAATTGCATGATATTCT
GATGTGCAAGTCATTAAAGACATTGGGTCATTTGGTACAGAAAATGCTGC
ATACATGTACATGAGCTCATCAGCTGTTGGCAACTGATTTTTATGAGTAG
TAAGTTGCATTTTGTTTTGCATTTGGAAAGGTATTTAGGACTCCGAGATG
GAAAGTAACCCAATGCACTCTCTTGTTTGCAGGATTCCTTGACACTTGTG
ATCGCTGTTGCCCCGCCTAAAGCGTATGAGGATGAAGTGTAAGTGGCGTT
ACTCTTTAAATCTGTCATTACTTTTTTGGCAACACCAAAGGGGTGGAGCC
TGTTGTGTCCTTTATTTACTGTCACGTTATCCTTGTTTCAACATCATACT
AATTATCCACATCATCCACAAACTGCACATTTAACAAACTTTTGTGTTCT
TTTGTTTACTAACCTGTAACCACGGTGACGTCACAGTTTTGTCGTGTTGT
GTACACATGCTCATGCAGTAGTTTGTAGTGGTGTACTATGGACTCTTCCA
TTACACACTTGGAGGGGTGCAGGAAGGAAAATTCTTCATTTCATTTATTT
TCCCAGTTTTTTCTCCCAATTCTCTTGTAATTGCTATGGGAGTCCACATT
CGTTACATTGTCTTATACCCCACACATGCTGCTGTCTTTACCTTTTTTCC
CTTTATTGTTTTGAAAGATTTTCCATCCACCCCTCCCAGTGGTGTTCCAA
TGGAACGGTCCTGTGTATACACCTATTGCACAGTCTGTCTTTATAACTCC
TTTGTGTTTGCTGCACTCAAAAGTTGTGACTGTTGTTGTAGGAAGAAACT
AACCCACACTCTTGCCATGGGAGACATTCAAGAGGGTAAGAACGCACCGC
TCTCGCTCGCACTGCGCCCCTCTAACATGCCTGTTTGCTTGCTTGAAGCC
TAGCTGGTATCCATTGTTCCTATTTTCTCTTCCGTGGTAGCTTTATCCAT
TACCCGTAGCCCAATCCAAAAGGAGAGAATTTTCAAAATAGCAATTTATA
TACCAGGCTAGTTTGCTAATGGCTTATTGTACAGCGGTTGTATTATCTTT
GCTGCTGTGTAGGCGCATGACTTTCACTGTAGGAAGGTTCTGGTTTGCTA
TGCCTAGAGCTCCGCTTGAGGTGGTGTAGCTTGGTGTGGTGTTCTGCATG
CTTCAAACAGAGATTTGTGAAAAAGCTGAATTACTTAATATATATGACCT
TCACTTTAAAGTAAGCTCAATGTCACAAAGAACTTCTTTCATGAAATGAA
ACAAGTAGTTCTCCCTGGTTGAGAGGCATGTCATACAATATTCGTCATTT
AAAGTTATAGTAATGTTTGTTTTTTTATGACAAATTTCCAAATTGAACTG
TTTTTGATTCTTTTTCTCTTTGAATTCATAAAAGTCAAGACAACTTAAAT
TACAAATCAGGAGTTTTCCCATATCTCTGTGCCTTGCTGCTTTCATGTAC
ATGTGTCCCACACTTGCATAGAAACACCACTAGTGCTACAACAGTTACAA
TTAGTTGGACTGGTAGCCCCGCTCCTATGCAAGTATGAGCATGTGTACAC
TTGGACTGTGTATAGGGGAGAGGGCTGCAGAGGTGGAGAGGTTGGTATGG
AGAGGGAACCATGCAGAACAGAAAAATTTCTGAAGAGGAATAATAGAAAT
CTATAACCAGGAAAGATATGGGTCGTGTGAAAAACTGCATCGGGTACAAT
GTAAGTCAATGCCCCAAGAATACAAAACAGCAGAAGAATTTAATGTGCGT
ATTAACCTATTCGAGTTTATGTAATTTTGCAAACCATTTCATACACACAT
ACCTCACTCGAACACATCTTTGAAATTCATGGTCTGTCCTCAAGTAACTT
AAAATAAAAACCCATTGTGCCTTTTTGACCCATTCGCTCTTTGGGCTCCG
GTCCCCTTGCCTGATCAACCCCCTCCCACTCCCGTTCCTGCCTTGTTGGA
CAGCCCTTGTCTTTACACAGCACTGTCTTTGCTAAAGGCTTTTTGCAGGC
CGATACTTCTTTTACGAATGATTCATTGCCTCATTTTATCTCCAAGTCTG
TGACTGTAAAATTGCTTGCCTTTGATGTCATATGTTTGTTTTTGTTTTGT
TTATTCATTTTACTAGGGGGATACATAAAGGCATTTTTCAATGTACCCTG
GGCTTAACATCAATTTAAAGTTGTATCTGTATTGAGTCACCGTTTGTTTT
CTACATGCCTGAAACAGCATGTACTTTTTGCTAAATATCAACCCATTTCG
ACAGGCTTATTTCCTTTCCTATATCTGGCAAACCAGTGCAAAGTTGCCTA
CCTATACTGTTTTTTAACTAATCCCTTGCGATGAAGATATGATAACACTA
CTTGTAACGAATATTACATTTGTTTTCTTCCACAGAACCTATTTCTGAGC
ACCCGACGTGGGTCCTAAAAGAAGACATCCAAGTGACAATCATCTGACGT
ACGGTCTGCATGTAGAAGTCCTCCAAACAACTCAACTGAGTAGAGTAGAG
TAGAGTTGATTCAGCCAGGTAGGAACTCCGGTTCCAGTTTAGGCCGCTCT
TCAATTCAGCCCTATGTCATCTCTGGTTTCTGGGAATGGTTCAGAGCCCT
GTATATAGTCGAACATCACTAAGTCTTGGTGTTGTTTCATATGACAGTCC
AGTCTCTTCTTAAAAC Coding sequence (CDS) from alignment at Sc0000026:54909..59124+ >transcript:BL96182_cuf8 ID=transcript:BL96182_cuf8|Name=transcript:BL96182_cuf8|organism=Branchiostoma lanceolatum|type=CDS|length=3507bp|location=Sequence derived from alignment at Sc0000026:54909..59124+ (Branchiostoma lanceolatum)
AGAAGAACACCCTCCAGGATTGGCCAGGACAAACTGTCGCCAGAGAAGTT
CGACCCTGCCAGTCTGTTCACCAAACCTCAGATTGCAGGGAGGGAGATCA
GGATGATCAAGATCAAAAAGGAGAAAGACACAGATGTGGGTGTGACAGTG
GAGGGAGGGATTGACTCGGTGCTAGGAGGAAAGGTCATTGTGACAGAGGT
GTGGGACGGAGGGCTGGCACACAGACATGGTGGCCTGTACAAGGGAGACC
AGATCATGAACTGTAACGGACGCACCATGCTGGACATCAAGCTGGCCCGT
GCACAGGAGATCCTCCGGGAAGAGATGAAGGCTGCTGGGGATTCCTTGAC
ACTTGTGATCGCTGTTGCCCCGCCTAAAGCGTATGAGGATGAAGTGAAGA
AACTAACCCACACTCTTGCCATGGGAGACATTCAAGAGGAACCTATTTCT
GAGCACCCGACGTGGGTCCTAAAAGAAGACATCCAAGTGACAATCATCTG
AAGAAGAACACCCTCCAGGATTGGCCAGGACAAACTGTCGCCAGAGAAGT
TCGACCCTGCCAGTCTGTTCACCAAACCTCAGATTGCAGGGAGGGAGATC
AGGATGATCAAGATCAAAAAGGAGAAAGACACAGATGTGGGTGTGACAGT
GGAGGGAGGGATTGACTCGGTGCTAGGAGGAAAGGTCATTGTGACAGAGG
TGTGGGACGGAGGGCTGGCACACAGACATGGTGGCCTGTACAAGGGAGAC
CAGATCATGAACTGTAACGGACGCACCATGCTGGACATCAAGCTGGCCCG
TGCACAGGAGATCCTCCGGGAAGAGATGAAGGCTGCTGGGGATTCCTTGA
CACTTGTGATCGCTGTTGCCCCGCCTAAAGCGTATGAGGATGAAGTGAAG
AAACTAACCCACACTCTTGCCATGGGAGACATTCAAGAGGAACCTATTTC
TGAGCACCCGACGTGGGTCCTAAAAGAAGACATCCAAGTGACAATCATCT
GAAGAAGAACACCCTCCAGGATTGGCCAGGACAAACTGTCGCCAGAGAAG
TTCGACCCTGCCAGTCTGTTCACCAAACCTCAGATTGCAGGGAGGGAGAT
CAGGATGATCAAGATCAAAAAGGAGAAAGACACAGATGTGGGTGTGACAG
TGGAGGGAGGGATTGACTCGGTGCTAGGAGGAAAGGTCATTGTGACAGAG
GTGTGGGACGGAGGGCTGGCACACAGACATGGTGGCCTGTACAAGGGAGA
CCAGATCATGAACTGTAACGGACGCACCATGCTGGACATCAAGCTGGCCC
GTGCACAGGAGATCCTCCGGGAAGAGATGAAGGCTGCTGGGGATTCCTTG
ACACTTGTGATCGCTGTTGCCCCGCCTAAAGCGTATGAGGATGAAGTGAA
GAAACTAACCCACACTCTTGCCATGGGAGACATTCAAGAGGAACCTATTT
CTGAGCACCCGACGTGGGTCCTAAAAGAAGACATCCAAGTGACAATCATC
TGAAGAAGAACACCCTCCAGGATTGGCCAGGACAAACTGTCGCCAGAGAA
GTTCGACCCTGCCAGTCTGTTCACCAAACCTCAGATTGCAGGGAGGGAGA
TCAGGATGATCAAGATCAAAAAGGAGAAAGACACAGATGTGGGTGTGACA
GTGGAGGGAGGGATTGACTCGGTGCTAGGAGGAAAGGTCATTGTGACAGA
GGTGTGGGACGGAGGGCTGGCACACAGACATGGTGGCCTGTACAAGGGAG
ACCAGATCATGAACTGTAACGGACGCACCATGCTGGACATCAAGCTGGCC
CGTGCACAGGAGATCCTCCGGGAAGAGATGAAGGCTGCTGGGGATTCCTT
GACACTTGTGATCGCTGTTGCCCCGCCTAAAGCGTATGAGGATGAAGTGA
AGAAACTAACCCACACTCTTGCCATGGGAGACATTCAAGAGGAACCTATT
TCTGAGCACCCGACGTGGGTCCTAAAAGAAGACATCCAAGTGACAATCAT
CTGAAGAAGAACACCCTCCAGGATTGGCCAGGACAAACTGTCGCCAGAGA
AGTTCGACCCTGCCAGTCTGTTCACCAAACCTCAGATTGCAGGGAGGGAG
ATCAGGATGATCAAGATCAAAAAGGAGAAAGACACAGATGTGGGTGTGAC
AGTGGAGGGAGGGATTGACTCGGTGCTAGGAGGAAAGGTCATTGTGACAG
AGGTGTGGGACGGAGGGCTGGCACACAGACATGGTGGCCTGTACAAGGGA
GACCAGATCATGAACTGTAACGGACGCACCATGCTGGACATCAAGCTGGC
CCGTGCACAGGAGATCCTCCGGGAAGAGATGAAGGCTGCTGGGGATTCCT
TGACACTTGTGATCGCTGTTGCCCCGCCTAAAGCGTATGAGGATGAAGTG
AAGAAACTAACCCACACTCTTGCCATGGGAGACATTCAAGAGGAACCTAT
TTCTGAGCACCCGACGTGGGTCCTAAAAGAAGACATCCAAGTGACAATCA
TCTGAAGAAGAACACCCTCCAGGATTGGCCAGGACAAACTGTCGCCAGAG
AAGTTCGACCCTGCCAGTCTGTTCACCAAACCTCAGATTGCAGGGAGGGA
GATCAGGATGATCAAGATCAAAAAGGAGAAAGACACAGATGTGGGTGTGA
CAGTGGAGGGAGGGATTGACTCGGTGCTAGGAGGAAAGGTCATTGTGACA
GAGGTGTGGGACGGAGGGCTGGCACACAGACATGGTGGCCTGTACAAGGG
AGACCAGATCATGAACTGTAACGGACGCACCATGCTGGACATCAAGCTGG
CCCGTGCACAGGAGATCCTCCGGGAAGAGATGAAGGCTGCTGGGGATTCC
TTGACACTTGTGATCGCTGTTGCCCCGCCTAAAGCGTATGAGGATGAAGT
GAAGAAACTAACCCACACTCTTGCCATGGGAGACATTCAAGAGGAACCTA
TTTCTGAGCACCCGACGTGGGTCCTAAAAGAAGACATCCAAGTGACAATC
ATCTGAAGAAGAACACCCTCCAGGATTGGCCAGGACAAACTGTCGCCAGA
GAAGTTCGACCCTGCCAGTCTGTTCACCAAACCTCAGATTGCAGGGAGGG
AGATCAGGATGATCAAGATCAAAAAGGAGAAAGACACAGATGTGGGTGTG
ACAGTGGAGGGAGGGATTGACTCGGTGCTAGGAGGAAAGGTCATTGTGAC
AGAGGTGTGGGACGGAGGGCTGGCACACAGACATGGTGGCCTGTACAAGG
GAGACCAGATCATGAACTGTAACGGACGCACCATGCTGGACATCAAGCTG
GCCCGTGCACAGGAGATCCTCCGGGAAGAGATGAAGGCTGCTGGGGATTC
CTTGACACTTGTGATCGCTGTTGCCCCGCCTAAAGCGTATGAGGATGAAG
TGAAGAAACTAACCCACACTCTTGCCATGGGAGACATTCAAGAGGAACCT
ATTTCTGAGCACCCGACGTGGGTCCTAAAAGAAGACATCCAAGTGACAAT
CATCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000026 | genome | Sc0000026:54909..59124 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96182_cuf8 |
| Biotype | protein_coding |
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