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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96173_evm0 >transcript:BL96173_evm0-protein ID=transcript:BL96173_evm0-protein|Name=transcript:BL96173_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=273bp
MAAILVTANRCGRSRSVQTVWSRISHKVHNSHASTSFGTEVNLVETHVDW
ASRAKLHPARIRGRKWLPGSASPNYPEFLKPPRDGYPYVFTPEDGTTASP
EGCAVAVRKVVHEVLEKNKNGAVLFRGLPLQTAEDFSRVVNNLGLKLMRY
EGGSAVRTEIAKDVNTASDEPPEFCIEPHNELAYTSHFPEKVIFFCLDPP
SPGAGGETVIADVREILPRLDKDVVDKFEKLGVMYWHHLPSHTPGAYLSW
QKSFQTEDRADVEKHMIANNTNW Run BLAST on NCBI mRNA from alignment at xpSc0039810:6200..7304- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96173_evm0 ID=transcript:BL96173_evm0|Name=transcript:BL96173_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=1105bp|location=Sequence derived from alignment at xpSc0039810:6200..7304- (Branchiostoma lanceolatum)
ATGGCCGCCATACTAGTGACAGCCAACAGGTGTGGGCGGTCACGCAGTGT
GCAAACTGTGTGGTCTCGTATCAGCCACAAGGTGCACAATAGTCACGCAT
CAACGTCATTTGGCACCGAAGTCAACCTCGTGGAGACCCACGTTGACTGG
GCAAGCCGAGCTAAACTCCACCCGGCACGGATCAGGGGCAGGAAGTGGCT
ACCTGGCTCGGCTAGTCCCAACTATCCCGAGTTTCTCAAGCCACCCAGGG
ACGGCTACCCGTACGTCTTCACACCCGAGGATGGCACAACCGCCTCTCCT
GAAGGGTGTGCTGTCGCCGTGCGGAAAGTAGTACACGAGGTGCTGGAGAA
GAACAAGAATGGGGCGGTACTGTTTCGTGGTCTGCCCCTGCAGACGGCAG
AAGATTTCTCCCGTGTAGTCAATAACCTGGGACTGAAATTAATGCGTTAT
GAAGGGGGGTCTGCAGTCAGGACTGAGATCGCAAAGGATGTGAACACAGC
GAGCGACGAGCCGCCCGAGTTTTGTATCGAGCCCCACAATGAGCTGGCAT
ACACTTCACACTTCCCTGAAAAGGTTAGTTTAACGAAAAGTATAAACTCG
AAGAACAGCTAACGTAAACCGAGTCTTCGTAGGCGTCTTTGGTTGATTGG
TCTTACGTCTCATTCGCTTTTTGTATTATATGTTGCTTTCTGAGTCTTGT
TTGCTATTCATTTACAACATGTCTTCTGAAATGGACAATGGGTATGCCCC
TTTCTCGTTGTGGATTTCCAGGTCATATTTTTCTGCCTGGACCCTCCGTC
TCCTGGTGCTGGTGGCGAGACTGTGATCGCAGACGTGCGGGAAATCCTGC
CCCGTCTGGACAAGGACGTCGTGGACAAGTTTGAGAAGCTCGGAGTGATG
TACTGGCATCATCTGCCCTCCCATACTCCTGGAGCATACCTCTCATGGCA
AAAGGTATATCTATCAGCTTATCATTTGATTCTTTAGATCACCGACACGA
AGAATATCAAACCAACAAGAGAATCACATTTTCTCTTCAGTCGTTCCAGA
CCGAGGACAGGGCGGATGTAGAGAAGCACATGATAGCGAACAACACAAAC
TGGAG Coding sequence (CDS) from alignment at xpSc0039810:6200..7304- >transcript:BL96173_evm0 ID=transcript:BL96173_evm0|Name=transcript:BL96173_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=2463bp|location=Sequence derived from alignment at xpSc0039810:6200..7304- (Branchiostoma lanceolatum)
ATGGCCGCCATACTAGTGACAGCCAACAGGTGTGGGCGGTCACGCAGTGT
GCAAACTGTGTGGTCTCGTATCAGCCACAAGGTGCACAATAGTCACGCAT
CAACGTCATTTGGCACCGAAGTCAACCTCGTGGAGACCCACGTTGACTGG
GCAAGCCGAGCTAAACTCCACCCGGCACGGATCAGGGGCAGGAAGTGGCT
ACCTGGCTCGGCTAGTCCCAACTATCCCGAGTTTCTCAAGCCACCCAGGG
ACGGCTACCCGTACGTCTTCACACCCGAGGATGGCACAACCGCCTCTCCT
GAAGGGTGTGCTGTCGCCGTGCGGAAAGTAGTACACGAGGTGCTGGAGAA
GAACAAGAATGGGGCGGTACTGTTTCGTGGTCTGCCCCTGCAGACGGCAG
AAGATTTCTCCCGTGTAGTCAATAACCTGGGACTGAAATTAATGCGTTAT
GAAGGGGGGTCTGCAGTCAGGACTGAGATCGCAAAGGATGTGAACACAGC
GAGCGACGAGCCGCCCGAGTTTTGTATCGAGCCCCACAATGAGCTGGCAT
ACACTTCACACTTCCCTGAAAAGGTCATATTTTTCTGCCTGGACCCTCCG
TCTCCTGGTGCTGGTGGCGAGACTGTGATCGCAGACGTGCGGGAAATCCT
GCCCCGTCTGGACAAGGACGTCGTGGACAAGTTTGAGAAGCTCGGAGTGA
TGTACTGGCATCATCTGCCCTCCCATACTCCTGGAGCATACCTCTCATGG
CAAAAGTCGTTCCAGACCGAGGACAGGGCGGATGTAGAGAAGCACATGAT
AGCGAACAACACAAACTGGAGATGGCCGCCATACTAGTGACAGCCAACAG
GTGTGGGCGGTCACGCAGTGTGCAAACTGTGTGGTCTCGTATCAGCCACA
AGGTGCACAATAGTCACGCATCAACGTCATTTGGCACCGAAGTCAACCTC
GTGGAGACCCACGTTGACTGGGCAAGCCGAGCTAAACTCCACCCGGCACG
GATCAGGGGCAGGAAGTGGCTACCTGGCTCGGCTAGTCCCAACTATCCCG
AGTTTCTCAAGCCACCCAGGGACGGCTACCCGTACGTCTTCACACCCGAG
GATGGCACAACCGCCTCTCCTGAAGGGTGTGCTGTCGCCGTGCGGAAAGT
AGTACACGAGGTGCTGGAGAAGAACAAGAATGGGGCGGTACTGTTTCGTG
GTCTGCCCCTGCAGACGGCAGAAGATTTCTCCCGTGTAGTCAATAACCTG
GGACTGAAATTAATGCGTTATGAAGGGGGGTCTGCAGTCAGGACTGAGAT
CGCAAAGGATGTGAACACAGCGAGCGACGAGCCGCCCGAGTTTTGTATCG
AGCCCCACAATGAGCTGGCATACACTTCACACTTCCCTGAAAAGGTCATA
TTTTTCTGCCTGGACCCTCCGTCTCCTGGTGCTGGTGGCGAGACTGTGAT
CGCAGACGTGCGGGAAATCCTGCCCCGTCTGGACAAGGACGTCGTGGACA
AGTTTGAGAAGCTCGGAGTGATGTACTGGCATCATCTGCCCTCCCATACT
CCTGGAGCATACCTCTCATGGCAAAAGTCGTTCCAGACCGAGGACAGGGC
GGATGTAGAGAAGCACATGATAGCGAACAACACAAACTGGAGATGGCCGC
CATACTAGTGACAGCCAACAGGTGTGGGCGGTCACGCAGTGTGCAAACTG
TGTGGTCTCGTATCAGCCACAAGGTGCACAATAGTCACGCATCAACGTCA
TTTGGCACCGAAGTCAACCTCGTGGAGACCCACGTTGACTGGGCAAGCCG
AGCTAAACTCCACCCGGCACGGATCAGGGGCAGGAAGTGGCTACCTGGCT
CGGCTAGTCCCAACTATCCCGAGTTTCTCAAGCCACCCAGGGACGGCTAC
CCGTACGTCTTCACACCCGAGGATGGCACAACCGCCTCTCCTGAAGGGTG
TGCTGTCGCCGTGCGGAAAGTAGTACACGAGGTGCTGGAGAAGAACAAGA
ATGGGGCGGTACTGTTTCGTGGTCTGCCCCTGCAGACGGCAGAAGATTTC
TCCCGTGTAGTCAATAACCTGGGACTGAAATTAATGCGTTATGAAGGGGG
GTCTGCAGTCAGGACTGAGATCGCAAAGGATGTGAACACAGCGAGCGACG
AGCCGCCCGAGTTTTGTATCGAGCCCCACAATGAGCTGGCATACACTTCA
CACTTCCCTGAAAAGGTCATATTTTTCTGCCTGGACCCTCCGTCTCCTGG
TGCTGGTGGCGAGACTGTGATCGCAGACGTGCGGGAAATCCTGCCCCGTC
TGGACAAGGACGTCGTGGACAAGTTTGAGAAGCTCGGAGTGATGTACTGG
CATCATCTGCCCTCCCATACTCCTGGAGCATACCTCTCATGGCAAAAGTC
GTTCCAGACCGAGGACAGGGCGGATGTAGAGAAGCACATGATAGCGAACA
ACACAAACTGGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xpSc0039810 | genome | xpSc0039810:6200..7304 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96173_evm0 |
| Biotype | protein_coding |
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