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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96127_evm1 >transcript:BL96127_evm1-protein ID=transcript:BL96127_evm1-protein|Name=transcript:BL96127_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=153bp
MEEFERDHRQGDFDMKKTDTRRHVPVGMFQWVLYVLGGLQPCLLLYYLNF
VHVRSESIQAVSSIGVQLTTTYTTGRQQSHYYDVVEVQDVVINEVVTMHS
VVFYLVLLIKDPCSGRLRRVIPVFKHSYPKLDYLVRVYNGVQDVLYPTIT
CEQ Run BLAST on NCBI mRNA from alignment at Sc0000572:30118..31939+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96127_evm1 ID=transcript:BL96127_evm1|Name=transcript:BL96127_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=1822bp|location=Sequence derived from alignment at Sc0000572:30118..31939+ (Branchiostoma lanceolatum)
ATGGAGGAATTCGAACGAGATCACAGACAAGGCGACTTCGACATGAAGAA
GACCGACACCAGAAGACATGTACCTGTCGGAATGGTGCTGGCTTTGTCTC
CAAAACTGGGCAGCCCAAAAACTTGTACGCTGAATTTAGCCCTGAGTACA
GCAGAAGACGGATCTGGACTCCAATCTTCACATTGTTACTTGTAAATGCA
TGTTTACTGTGGTACACAGTGGGCAGTGTACAGACCAAGGTGAGGTGAAA
TTATGAGGGGGGGGCGTAATGAATCATTGATTCATAGAATGAGTTATTAG
GCCACTCCGTAAAAACATGTCGAGGCAAATATCAGGGAAGCTAAAAGTGT
AGTTATGAAATAACAATACCAGGCAAAGTATTGATTACAGTTGTCACAAA
GTCAAGGATGATATGATTATATACTAGGAATTTTAGGATGTTTCACGCCT
AGACTAACACAATATTTGATAAATCACTGTCTGTCAGTCACTAGTTTCCC
AGTCATTGTGAATTTCTTGTTTCTTTTCTGACAGTTCCAGTGGGTTCTGT
ACGTGTTGGGAGGCCTGCAGCCCTGCCTTCTTCTGTACTACCTCAACTTC
GTGCACGTCCGTTCAGAGTCCATCCAGGCAGTGTCATCTATAGGAGTACA
ACTCACCACAACCTACACCACAGGCAGGCAGCAGTCACACTACTACGACG
TGGTGGAAGTACAAGATGTTGTCATAAATGAAGTGGTGACTATGGTGAGT
ATTACCTGTCATTCTTCAGAATGTTATTTTATGTTGTTAATTATACAATT
ACTTCCGAAAGAACTTAATGAAATAGATTGGCTTAAATGTACTAACGTTG
GTAGTCTCACTTTTTAAGCATCTGCTTCAAATTGACAGTATTTCTTTTCA
TCATGTAAGAGTAATACCTAGAAACCATGTGATGATAACTTGCCCAGGAA
TGACATAGTATTTTGATGATAGCTACAGAGTAGAGCAGAGTAGAGTAGAT
TTATTTGGTCCAGTCTGGGCCGGTACTCAGGAAATTGTCATCGTTGATCT
TAGCAAGTTTGTGCTTGCCATTTACTGTCTGTGATATCTTATCTCCTTGC
AGCATTCTGTAGTGTTCTACCTGGTTCTCCTCATCAAAGATCCCTGCAGT
GGCAGACTGAGAAGGGTCATTCCTGTGTTTAAGGTGAGGGGTCCTGTGAA
TGTGATGTAACCTTGCTTTTTAGATTCAAACTTACTGTCTGTTTTAATGG
GTCTGAGAGTTGCCACACATTTAAAGAATGGGAAAGAAAGTATGCAGTAC
ACATTTGCCACTCCAACAGGACCAACACACAGACATATGCACACACACAT
GCACACACACACACACACACACACACACACACACACTCTATTTCTCTCTC
TCACACACACAACCACACACATATACAAAAGAAAATGACAGACACACATA
CTGTATTCATTCATAACCCTTAGTAGGTCTGAGCAACATTACTTCTTGCC
ATTGATCTTTTTCCTACTGAGTTTTCAGTGTGGCAGTACAAAACTGCAGA
TTGATGTTATATTGCCTGCAGCATGCTTGATATGATAACAGTTGATTTAC
ACCTGTATACATCTGACAATGTTTACTTTTTCATTTGTGACCACAGTAGT
AGAATTGCGTGACCTTGGGAATTGAACCAGTGAGCATCTGTGATCTATAG
TGCTGATCTAATTTTGTGTTCTGTTTTCCCTACAGCATTCCTACCCAAAG
CTGGACTACTTGGTGAGAGTTTACAATGGAGTCCAAGATGTTCTTTATCC
AACAATCACCTGTGAACAATAA Coding sequence (CDS) from alignment at Sc0000572:30118..31939+ >transcript:BL96127_evm1 ID=transcript:BL96127_evm1|Name=transcript:BL96127_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=1848bp|location=Sequence derived from alignment at Sc0000572:30118..31939+ (Branchiostoma lanceolatum)
ATGGAGGAATTCGAACGAGATCACAGACAAGGCGACTTCGACATGAAGAA
GACCGACACCAGAAGACATGTACCTGTCGGAATGTTCCAGTGGGTTCTGT
ACGTGTTGGGAGGCCTGCAGCCCTGCCTTCTTCTGTACTACCTCAACTTC
GTGCACGTCCGTTCAGAGTCCATCCAGGCAGTGTCATCTATAGGAGTACA
ACTCACCACAACCTACACCACAGGCAGGCAGCAGTCACACTACTACGACG
TGGTGGAAGTACAAGATGTTGTCATAAATGAAGTGGTGACTATGCATTCT
GTAGTGTTCTACCTGGTTCTCCTCATCAAAGATCCCTGCAGTGGCAGACT
GAGAAGGGTCATTCCTGTGTTTAAGCATTCCTACCCAAAGCTGGACTACT
TGGTGAGAGTTTACAATGGAGTCCAAGATGTTCTTTATCCAACAATCACC
TGTGAACAATAAATGGAGGAATTCGAACGAGATCACAGACAAGGCGACTT
CGACATGAAGAAGACCGACACCAGAAGACATGTACCTGTCGGAATGTTCC
AGTGGGTTCTGTACGTGTTGGGAGGCCTGCAGCCCTGCCTTCTTCTGTAC
TACCTCAACTTCGTGCACGTCCGTTCAGAGTCCATCCAGGCAGTGTCATC
TATAGGAGTACAACTCACCACAACCTACACCACAGGCAGGCAGCAGTCAC
ACTACTACGACGTGGTGGAAGTACAAGATGTTGTCATAAATGAAGTGGTG
ACTATGCATTCTGTAGTGTTCTACCTGGTTCTCCTCATCAAAGATCCCTG
CAGTGGCAGACTGAGAAGGGTCATTCCTGTGTTTAAGCATTCCTACCCAA
AGCTGGACTACTTGGTGAGAGTTTACAATGGAGTCCAAGATGTTCTTTAT
CCAACAATCACCTGTGAACAATAAATGGAGGAATTCGAACGAGATCACAG
ACAAGGCGACTTCGACATGAAGAAGACCGACACCAGAAGACATGTACCTG
TCGGAATGTTCCAGTGGGTTCTGTACGTGTTGGGAGGCCTGCAGCCCTGC
CTTCTTCTGTACTACCTCAACTTCGTGCACGTCCGTTCAGAGTCCATCCA
GGCAGTGTCATCTATAGGAGTACAACTCACCACAACCTACACCACAGGCA
GGCAGCAGTCACACTACTACGACGTGGTGGAAGTACAAGATGTTGTCATA
AATGAAGTGGTGACTATGCATTCTGTAGTGTTCTACCTGGTTCTCCTCAT
CAAAGATCCCTGCAGTGGCAGACTGAGAAGGGTCATTCCTGTGTTTAAGC
ATTCCTACCCAAAGCTGGACTACTTGGTGAGAGTTTACAATGGAGTCCAA
GATGTTCTTTATCCAACAATCACCTGTGAACAATAAATGGAGGAATTCGA
ACGAGATCACAGACAAGGCGACTTCGACATGAAGAAGACCGACACCAGAA
GACATGTACCTGTCGGAATGTTCCAGTGGGTTCTGTACGTGTTGGGAGGC
CTGCAGCCCTGCCTTCTTCTGTACTACCTCAACTTCGTGCACGTCCGTTC
AGAGTCCATCCAGGCAGTGTCATCTATAGGAGTACAACTCACCACAACCT
ACACCACAGGCAGGCAGCAGTCACACTACTACGACGTGGTGGAAGTACAA
GATGTTGTCATAAATGAAGTGGTGACTATGCATTCTGTAGTGTTCTACCT
GGTTCTCCTCATCAAAGATCCCTGCAGTGGCAGACTGAGAAGGGTCATTC
CTGTGTTTAAGCATTCCTACCCAAAGCTGGACTACTTGGTGAGAGTTTAC
AATGGAGTCCAAGATGTTCTTTATCCAACAATCACCTGTGAACAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000572 | genome | Sc0000572:30118..31939 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96127_evm1 |
| Biotype | protein_coding |
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