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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95712_evm1 >transcript:BL95712_evm1-protein ID=transcript:BL95712_evm1-protein|Name=transcript:BL95712_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=290bp
MPTSDYQYEEGTFDVTPEIKRDFDENGYVIIRGVLSKQEISKLRQAVELE
EGVKKHSYEIPDGSGKSIRLCIWRHPGNDVTAMIARIEKTAGFMGKFLGG
EVYHHHSKLIQKEPYTGGLFSWHQDYGYWYKNGCLFPDMASFHLAVDKAD
RENGCMQILPGSHKLGRIDHTFVGGQQGADMERVDHVRKLFDLVHLELDE
GDACYFHSNLLHCSSQNNSARRRWAIITAFNRASNNPVPEESHPWPLYTP
IQMVPNDALLNCDNFTDLSGKAFVDPTTDKNVKTDSSPQQ Run BLAST on NCBI mRNA from alignment at Sc0000100:933708..936414+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95712_evm1 ID=transcript:BL95712_evm1|Name=transcript:BL95712_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2707bp|location=Sequence derived from alignment at Sc0000100:933708..936414+ (Branchiostoma lanceolatum)
ATGCCAACATCAGGTGAGAGATGGCACAGATCTAGGAAGGTGTCTTCAAT
TTGGTAACATTCCTGGCGTGTATCTAGTTATAGTCCGCTTTACTACATGC
ATGCAGCGATTGGATTTTGCTTAACTGCCGTTTGTACTATACCGGCCTTT
TGGCCCGAAGTAGCGGCACAAATTGCTTAATGTTTTGAATATTTGTCATC
GATATTGTGCGAAATTTTCTTTCCTTTAGACTATCAGTACGAAGAGGGCA
CGTTTGACGTCACGCCTGAGATAAAACGTGACTTCGACGAGAATGGCTAC
GTCATCATCAGGTTGGGTTGACAGATCGGATAAAACAGAAAAAAAGCAAA
TTTTTTAAATGTACTGAAATGATAAACAGTGTTAAATGTAAATTTTGATG
TTTATTATTTTACATTTGATACTTATCATAGAACAGATACAAGACCACCA
TTGTGCACTTTAAATATTAGACTTTTTCAATTTTCTTTTCATCTGCAGGG
GTGTCCTGAGTAAACAGGAGATTTCCAAGCTTCGCCAGGCGGTAGAGTTG
GAGGAGGGAGTAAAGAAACATTCGTACGAGATTCCCGACGGGTCGGGGAA
GAGCATCCGCCTCTGCATCTGGCGACACCCCGGAAATGACGTCACGGCGA
TGATAGCTAGGATAGAGAAAACGGCGGGATTCATGGGAAAGGTAAAACAA
GATATAGTTGCCCACTGAACATTTGTTTATTTGTTCTAATTAATGTTTTT
TCATTTGAAATACAACGGTACGATGAAGCTTTTTGAGTGCTGTGTGATTG
TTTTGACAGTTCCTGGGAGGTGAAGTGTACCATCACCACAGTAAACTGAT
TCAGAAGGAACCGTACACGGGAGGGCTGTTCAGCTGGCACCAGGACTATG
GGTATACACAAAGTTTACTTCGTACATCACTATATAGAATTCGATGATTA
TGTGTTTGTTCGCTTGGTCTGATTGATTGTTTGTTTGTTTTCTATCTTGC
AATCATCATGTATCATTTGTTGATTTTCTCTTACCATTTATTGTATAAAT
TCCTGGCATTTATAAATCTATCATACATGTACAGTGTCACCTTTCGTCGT
GTCATTCATCGCCATTCCCCTTCGTGTATAACTAACAGTTGTGTAACCAA
TATATTACTTATGACTCTTCTATCTCACATCACGCAGGTACTGGTACAAA
AATGGCTGCCTCTTCCCCGACATGGCGTCCTTCCATCTCGCCGTGGATAA
AGCAGACAGGGAGAATGGGTGTATGCAGGTATGAGCACATTTACCAATGG
GAGAATGAGTAATATAGTCATTGGATACAGTGTTGCAGTTAAATTTGTCA
CGTTGTTATGCCGCGAAGATACACGTTCTGTGCCGTTCGGTGATAAACTT
TTTTGACACGTTTGTATTGCTGCCTTTTCCGTTGTCTTGCTTGCTTCTCC
CGTAAGTCTGAATACGCTTTTACACCGTTTAAGAGGAATAGAGGGGAAGA
AATGTCCATAGCCATACACATCGGAATATACTGGAAATAGCACCACCAAA
TTTCGCGCACAGCGTTTATTTTCCTCTTACTCTCGTAGATTCTGCCAGGG
TCGCACAAGCTGGGCCGTATTGACCACACGTTTGTGGGCGGGCAGCAGGG
GGCAGACATGGAGCGGGTCGACCACGTCAGGAAGCTGTTCGACCTGGTTC
ACCTGGAGCTGGATGAAGGTGAATCAAAACCGTAAAATGTAGTTAGTTGC
AGGTAAGACATGCGTGCCCAGCTGTGAGCATTGTAGAAATAATGTTGCTA
CGATTGAAATTAAAGTTTATAAACAACTCGCTGTTTCGCTGTTACATTTC
ATACCATTTAGGAAAATGATACTTGAGTGGCCTAAATTTCTGTTTACACA
GTCCTGAGTCGACTCAGATGAGATCGACTGAGTGTACTCCGAGTGTGCTT
GGAAAATGCGTGTGTAAACCCAGCTTTATATAACCGCTGTGTGTTTATGA
TTCACAGTGAATGGTTGTTTATTGCAGGTGACGCCTGCTACTTTCACAGC
AACCTGTTGCACTGCAGCAGTCAGAATAACTCCGCTAGGAGGCGCTGGGC
CATCATCACTGCCTTCAACCGCGCCAGTAACAACCCCGTACCCGAGGAGT
CCCACCCCTGGCCTCTGTACACACCCATACAGATGGTACGTGGGTCACTT
AGCGAACGTTAGCCATATATAGGATAGTCCTGAGTACAATACTGCTTTCC
CATAAAGTCATTCTGACAGCTATGATGAAGCGTGATGCATAATAATCATG
TATGTTGTCGTCGTTACTTGTACTTTTTAACCCAGAGAACTATATCGATA
TATCTTGATAACCATTTCCCCTTGTATTTGTAGACGTAGTCAGTGTAACG
CGAACACCGCTGAATAAAGGGCCCCTCCCCGCCGGCTGAAGTTGATCGGG
CCCTATAAACTTAAGCGCGGTTTAATCAGGCTAATGTCGAGCTAGCAGCA
GATGAATGTGAGGAGATACCATCGATTATGAATTTAGTTTAAAGATGATA
GAATAAGAATTTCAATTACGTTACCTTCTGTACCTTCATTCAGGTGCCGA
ATGACGCGCTCCTGAACTGTGATAATTTCACAGACCTGAGCGGCAAGGCC
TTCGTGGACCCCACTACTGACAAGAACGTCAAGACCGACTCCAGCCCTCA
ACAGTGA Coding sequence (CDS) from alignment at Sc0000100:933708..936414+ >transcript:BL95712_evm1 ID=transcript:BL95712_evm1|Name=transcript:BL95712_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=6984bp|location=Sequence derived from alignment at Sc0000100:933708..936414+ (Branchiostoma lanceolatum)
ATGCCAACATCAGACTATCAGTACGAAGAGGGCACGTTTGACGTCACGCC
TGAGATAAAACGTGACTTCGACGAGAATGGCTACGTCATCATCAGGGGTG
TCCTGAGTAAACAGGAGATTTCCAAGCTTCGCCAGGCGGTAGAGTTGGAG
GAGGGAGTAAAGAAACATTCGTACGAGATTCCCGACGGGTCGGGGAAGAG
CATCCGCCTCTGCATCTGGCGACACCCCGGAAATGACGTCACGGCGATGA
TAGCTAGGATAGAGAAAACGGCGGGATTCATGGGAAAGTTCCTGGGAGGT
GAAGTGTACCATCACCACAGTAAACTGATTCAGAAGGAACCGTACACGGG
AGGGCTGTTCAGCTGGCACCAGGACTATGGGTACTGGTACAAAAATGGCT
GCCTCTTCCCCGACATGGCGTCCTTCCATCTCGCCGTGGATAAAGCAGAC
AGGGAGAATGGGTGTATGCAGATTCTGCCAGGGTCGCACAAGCTGGGCCG
TATTGACCACACGTTTGTGGGCGGGCAGCAGGGGGCAGACATGGAGCGGG
TCGACCACGTCAGGAAGCTGTTCGACCTGGTTCACCTGGAGCTGGATGAA
GGTGACGCCTGCTACTTTCACAGCAACCTGTTGCACTGCAGCAGTCAGAA
TAACTCCGCTAGGAGGCGCTGGGCCATCATCACTGCCTTCAACCGCGCCA
GTAACAACCCCGTACCCGAGGAGTCCCACCCCTGGCCTCTGTACACACCC
ATACAGATGGTGCCGAATGACGCGCTCCTGAACTGTGATAATTTCACAGA
CCTGAGCGGCAAGGCCTTCGTGGACCCCACTACTGACAAGAACGTCAAGA
CCGACTCCAGCCCTCAACAGTGAATGCCAACATCAGACTATCAGTACGAA
GAGGGCACGTTTGACGTCACGCCTGAGATAAAACGTGACTTCGACGAGAA
TGGCTACGTCATCATCAGGGGTGTCCTGAGTAAACAGGAGATTTCCAAGC
TTCGCCAGGCGGTAGAGTTGGAGGAGGGAGTAAAGAAACATTCGTACGAG
ATTCCCGACGGGTCGGGGAAGAGCATCCGCCTCTGCATCTGGCGACACCC
CGGAAATGACGTCACGGCGATGATAGCTAGGATAGAGAAAACGGCGGGAT
TCATGGGAAAGTTCCTGGGAGGTGAAGTGTACCATCACCACAGTAAACTG
ATTCAGAAGGAACCGTACACGGGAGGGCTGTTCAGCTGGCACCAGGACTA
TGGGTACTGGTACAAAAATGGCTGCCTCTTCCCCGACATGGCGTCCTTCC
ATCTCGCCGTGGATAAAGCAGACAGGGAGAATGGGTGTATGCAGATTCTG
CCAGGGTCGCACAAGCTGGGCCGTATTGACCACACGTTTGTGGGCGGGCA
GCAGGGGGCAGACATGGAGCGGGTCGACCACGTCAGGAAGCTGTTCGACC
TGGTTCACCTGGAGCTGGATGAAGGTGACGCCTGCTACTTTCACAGCAAC
CTGTTGCACTGCAGCAGTCAGAATAACTCCGCTAGGAGGCGCTGGGCCAT
CATCACTGCCTTCAACCGCGCCAGTAACAACCCCGTACCCGAGGAGTCCC
ACCCCTGGCCTCTGTACACACCCATACAGATGGTGCCGAATGACGCGCTC
CTGAACTGTGATAATTTCACAGACCTGAGCGGCAAGGCCTTCGTGGACCC
CACTACTGACAAGAACGTCAAGACCGACTCCAGCCCTCAACAGTGAATGC
CAACATCAGACTATCAGTACGAAGAGGGCACGTTTGACGTCACGCCTGAG
ATAAAACGTGACTTCGACGAGAATGGCTACGTCATCATCAGGGGTGTCCT
GAGTAAACAGGAGATTTCCAAGCTTCGCCAGGCGGTAGAGTTGGAGGAGG
GAGTAAAGAAACATTCGTACGAGATTCCCGACGGGTCGGGGAAGAGCATC
CGCCTCTGCATCTGGCGACACCCCGGAAATGACGTCACGGCGATGATAGC
TAGGATAGAGAAAACGGCGGGATTCATGGGAAAGTTCCTGGGAGGTGAAG
TGTACCATCACCACAGTAAACTGATTCAGAAGGAACCGTACACGGGAGGG
CTGTTCAGCTGGCACCAGGACTATGGGTACTGGTACAAAAATGGCTGCCT
CTTCCCCGACATGGCGTCCTTCCATCTCGCCGTGGATAAAGCAGACAGGG
AGAATGGGTGTATGCAGATTCTGCCAGGGTCGCACAAGCTGGGCCGTATT
GACCACACGTTTGTGGGCGGGCAGCAGGGGGCAGACATGGAGCGGGTCGA
CCACGTCAGGAAGCTGTTCGACCTGGTTCACCTGGAGCTGGATGAAGGTG
ACGCCTGCTACTTTCACAGCAACCTGTTGCACTGCAGCAGTCAGAATAAC
TCCGCTAGGAGGCGCTGGGCCATCATCACTGCCTTCAACCGCGCCAGTAA
CAACCCCGTACCCGAGGAGTCCCACCCCTGGCCTCTGTACACACCCATAC
AGATGGTGCCGAATGACGCGCTCCTGAACTGTGATAATTTCACAGACCTG
AGCGGCAAGGCCTTCGTGGACCCCACTACTGACAAGAACGTCAAGACCGA
CTCCAGCCCTCAACAGTGAATGCCAACATCAGACTATCAGTACGAAGAGG
GCACGTTTGACGTCACGCCTGAGATAAAACGTGACTTCGACGAGAATGGC
TACGTCATCATCAGGGGTGTCCTGAGTAAACAGGAGATTTCCAAGCTTCG
CCAGGCGGTAGAGTTGGAGGAGGGAGTAAAGAAACATTCGTACGAGATTC
CCGACGGGTCGGGGAAGAGCATCCGCCTCTGCATCTGGCGACACCCCGGA
AATGACGTCACGGCGATGATAGCTAGGATAGAGAAAACGGCGGGATTCAT
GGGAAAGTTCCTGGGAGGTGAAGTGTACCATCACCACAGTAAACTGATTC
AGAAGGAACCGTACACGGGAGGGCTGTTCAGCTGGCACCAGGACTATGGG
TACTGGTACAAAAATGGCTGCCTCTTCCCCGACATGGCGTCCTTCCATCT
CGCCGTGGATAAAGCAGACAGGGAGAATGGGTGTATGCAGATTCTGCCAG
GGTCGCACAAGCTGGGCCGTATTGACCACACGTTTGTGGGCGGGCAGCAG
GGGGCAGACATGGAGCGGGTCGACCACGTCAGGAAGCTGTTCGACCTGGT
TCACCTGGAGCTGGATGAAGGTGACGCCTGCTACTTTCACAGCAACCTGT
TGCACTGCAGCAGTCAGAATAACTCCGCTAGGAGGCGCTGGGCCATCATC
ACTGCCTTCAACCGCGCCAGTAACAACCCCGTACCCGAGGAGTCCCACCC
CTGGCCTCTGTACACACCCATACAGATGGTGCCGAATGACGCGCTCCTGA
ACTGTGATAATTTCACAGACCTGAGCGGCAAGGCCTTCGTGGACCCCACT
ACTGACAAGAACGTCAAGACCGACTCCAGCCCTCAACAGTGAATGCCAAC
ATCAGACTATCAGTACGAAGAGGGCACGTTTGACGTCACGCCTGAGATAA
AACGTGACTTCGACGAGAATGGCTACGTCATCATCAGGGGTGTCCTGAGT
AAACAGGAGATTTCCAAGCTTCGCCAGGCGGTAGAGTTGGAGGAGGGAGT
AAAGAAACATTCGTACGAGATTCCCGACGGGTCGGGGAAGAGCATCCGCC
TCTGCATCTGGCGACACCCCGGAAATGACGTCACGGCGATGATAGCTAGG
ATAGAGAAAACGGCGGGATTCATGGGAAAGTTCCTGGGAGGTGAAGTGTA
CCATCACCACAGTAAACTGATTCAGAAGGAACCGTACACGGGAGGGCTGT
TCAGCTGGCACCAGGACTATGGGTACTGGTACAAAAATGGCTGCCTCTTC
CCCGACATGGCGTCCTTCCATCTCGCCGTGGATAAAGCAGACAGGGAGAA
TGGGTGTATGCAGATTCTGCCAGGGTCGCACAAGCTGGGCCGTATTGACC
ACACGTTTGTGGGCGGGCAGCAGGGGGCAGACATGGAGCGGGTCGACCAC
GTCAGGAAGCTGTTCGACCTGGTTCACCTGGAGCTGGATGAAGGTGACGC
CTGCTACTTTCACAGCAACCTGTTGCACTGCAGCAGTCAGAATAACTCCG
CTAGGAGGCGCTGGGCCATCATCACTGCCTTCAACCGCGCCAGTAACAAC
CCCGTACCCGAGGAGTCCCACCCCTGGCCTCTGTACACACCCATACAGAT
GGTGCCGAATGACGCGCTCCTGAACTGTGATAATTTCACAGACCTGAGCG
GCAAGGCCTTCGTGGACCCCACTACTGACAAGAACGTCAAGACCGACTCC
AGCCCTCAACAGTGAATGCCAACATCAGACTATCAGTACGAAGAGGGCAC
GTTTGACGTCACGCCTGAGATAAAACGTGACTTCGACGAGAATGGCTACG
TCATCATCAGGGGTGTCCTGAGTAAACAGGAGATTTCCAAGCTTCGCCAG
GCGGTAGAGTTGGAGGAGGGAGTAAAGAAACATTCGTACGAGATTCCCGA
CGGGTCGGGGAAGAGCATCCGCCTCTGCATCTGGCGACACCCCGGAAATG
ACGTCACGGCGATGATAGCTAGGATAGAGAAAACGGCGGGATTCATGGGA
AAGTTCCTGGGAGGTGAAGTGTACCATCACCACAGTAAACTGATTCAGAA
GGAACCGTACACGGGAGGGCTGTTCAGCTGGCACCAGGACTATGGGTACT
GGTACAAAAATGGCTGCCTCTTCCCCGACATGGCGTCCTTCCATCTCGCC
GTGGATAAAGCAGACAGGGAGAATGGGTGTATGCAGATTCTGCCAGGGTC
GCACAAGCTGGGCCGTATTGACCACACGTTTGTGGGCGGGCAGCAGGGGG
CAGACATGGAGCGGGTCGACCACGTCAGGAAGCTGTTCGACCTGGTTCAC
CTGGAGCTGGATGAAGGTGACGCCTGCTACTTTCACAGCAACCTGTTGCA
CTGCAGCAGTCAGAATAACTCCGCTAGGAGGCGCTGGGCCATCATCACTG
CCTTCAACCGCGCCAGTAACAACCCCGTACCCGAGGAGTCCCACCCCTGG
CCTCTGTACACACCCATACAGATGGTGCCGAATGACGCGCTCCTGAACTG
TGATAATTTCACAGACCTGAGCGGCAAGGCCTTCGTGGACCCCACTACTG
ACAAGAACGTCAAGACCGACTCCAGCCCTCAACAGTGAATGCCAACATCA
GACTATCAGTACGAAGAGGGCACGTTTGACGTCACGCCTGAGATAAAACG
TGACTTCGACGAGAATGGCTACGTCATCATCAGGGGTGTCCTGAGTAAAC
AGGAGATTTCCAAGCTTCGCCAGGCGGTAGAGTTGGAGGAGGGAGTAAAG
AAACATTCGTACGAGATTCCCGACGGGTCGGGGAAGAGCATCCGCCTCTG
CATCTGGCGACACCCCGGAAATGACGTCACGGCGATGATAGCTAGGATAG
AGAAAACGGCGGGATTCATGGGAAAGTTCCTGGGAGGTGAAGTGTACCAT
CACCACAGTAAACTGATTCAGAAGGAACCGTACACGGGAGGGCTGTTCAG
CTGGCACCAGGACTATGGGTACTGGTACAAAAATGGCTGCCTCTTCCCCG
ACATGGCGTCCTTCCATCTCGCCGTGGATAAAGCAGACAGGGAGAATGGG
TGTATGCAGATTCTGCCAGGGTCGCACAAGCTGGGCCGTATTGACCACAC
GTTTGTGGGCGGGCAGCAGGGGGCAGACATGGAGCGGGTCGACCACGTCA
GGAAGCTGTTCGACCTGGTTCACCTGGAGCTGGATGAAGGTGACGCCTGC
TACTTTCACAGCAACCTGTTGCACTGCAGCAGTCAGAATAACTCCGCTAG
GAGGCGCTGGGCCATCATCACTGCCTTCAACCGCGCCAGTAACAACCCCG
TACCCGAGGAGTCCCACCCCTGGCCTCTGTACACACCCATACAGATGGTG
CCGAATGACGCGCTCCTGAACTGTGATAATTTCACAGACCTGAGCGGCAA
GGCCTTCGTGGACCCCACTACTGACAAGAACGTCAAGACCGACTCCAGCC
CTCAACAGTGAATGCCAACATCAGACTATCAGTACGAAGAGGGCACGTTT
GACGTCACGCCTGAGATAAAACGTGACTTCGACGAGAATGGCTACGTCAT
CATCAGGGGTGTCCTGAGTAAACAGGAGATTTCCAAGCTTCGCCAGGCGG
TAGAGTTGGAGGAGGGAGTAAAGAAACATTCGTACGAGATTCCCGACGGG
TCGGGGAAGAGCATCCGCCTCTGCATCTGGCGACACCCCGGAAATGACGT
CACGGCGATGATAGCTAGGATAGAGAAAACGGCGGGATTCATGGGAAAGT
TCCTGGGAGGTGAAGTGTACCATCACCACAGTAAACTGATTCAGAAGGAA
CCGTACACGGGAGGGCTGTTCAGCTGGCACCAGGACTATGGGTACTGGTA
CAAAAATGGCTGCCTCTTCCCCGACATGGCGTCCTTCCATCTCGCCGTGG
ATAAAGCAGACAGGGAGAATGGGTGTATGCAGATTCTGCCAGGGTCGCAC
AAGCTGGGCCGTATTGACCACACGTTTGTGGGCGGGCAGCAGGGGGCAGA
CATGGAGCGGGTCGACCACGTCAGGAAGCTGTTCGACCTGGTTCACCTGG
AGCTGGATGAAGGTGACGCCTGCTACTTTCACAGCAACCTGTTGCACTGC
AGCAGTCAGAATAACTCCGCTAGGAGGCGCTGGGCCATCATCACTGCCTT
CAACCGCGCCAGTAACAACCCCGTACCCGAGGAGTCCCACCCCTGGCCTC
TGTACACACCCATACAGATGGTGCCGAATGACGCGCTCCTGAACTGTGAT
AATTTCACAGACCTGAGCGGCAAGGCCTTCGTGGACCCCACTACTGACAA
GAACGTCAAGACCGACTCCAGCCCTCAACAGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000100 | genome | Sc0000100:933708..936414 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95712_evm1 |
| Biotype | protein_coding |
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