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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95652_evm1 >transcript:BL95652_evm1-protein ID=transcript:BL95652_evm1-protein|Name=transcript:BL95652_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=395bp
MTTIPQSAEDIALSWVQQVLQRDLPGVTITDVDVKGSINQGEGFLSDIVA
FDAVGTRNGTSQRYSLVAKLTDFKRPQTVMSDFPKDFHIEVEILEVKFYS
ILVPDLLYNVSVQSTEQKFQPKGTDFGDNAHADSLFLPKCYYAASDPSSM
VSVRVMENLKTQGFSIKPDLQPLSREEMMLTVGALAQLHGLSHRLELRLG
KPLPEKYDWIRPDTNEQAMEAFTDEFHKCLKKFAAAFPDQTDLVARLEKQ
NLKTLFDYTGGSRVKVLSHSDCWVNNIMIKYEGDVPVAAKLVDWQGIKFF
PPTYDLAQLFLCCMSWDVFYNHRDVILAHYHQQLQETLDPSESSGLQKYT
LEQLKEDFKADCLYGMCCRVMGLMILPADQDLLRMVQEIKEWGVL Run BLAST on NCBI mRNA from alignment at Sc0000086:837801..844261+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95652_evm1 ID=transcript:BL95652_evm1|Name=transcript:BL95652_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=6461bp|location=Sequence derived from alignment at Sc0000086:837801..844261+ (Branchiostoma lanceolatum)
ATGACCACCATACCACAATCTGCTGAAGACATCGCCCTCTCCTGGGTGCA
GCAGGTACTGCAGAGAGACCTCCCTGGCGTCACCATCACGGACGTCGATG
TGAAGGGATCCATCAATCAAGGTGAAGGATTCCTGAGCGACATCGTCGCT
TTTGATGCTGTTGGGACCAGGAATGGTACCAGTCAGCGCTACAGCCTCGT
TGCTAAACTGACCGATTTCAAGCGCCCGCAGACTGTAATGTCTGACTTTC
CGAAAGATTTTCACATCGAAGTAGAAATCCTGGAGGTGAAGTTTTACTCC
ATTTTGGTCCCCGATCTTCTTTATAATGTGTCGGTCCAAAGTACAGAGCA
GAAATTCCAGCCCAAAGGTACAGATTTCGGTGATAACGCCCATGCCGATT
CCTTGTTCCTCCCCAAATGCTACTACGCCGCCTCCGACCCAAGCTCCATG
GTGTCCGTCAGGGTTATGGAGAACCTGAAAACTCAGGGGTTCTCAATCAA
ACCCGACCTCCAACCACTGAGCCGTGAGGAGATGATGCTGACAGTCGGGG
CCCTGGCGCAGCTGCACGGCCTGTCACATCGACTAGAGCTCCGTTTGGGC
AAACCCCTTCCCGAGAAGTACGACTGGATTCGGCCAGATACCAATGAGCA
AGCGATGGAAGCCTTCACCGACGAATTTCATAAGTGTTTGAAGAAATTCG
CAGCGGCTTTCCCTGACCAAACAGACCTTGTTGCTCGTCTGGAGAAGCAA
AACCTCAAGACTTTGTTTGATTACACGGGGGGCTCGAGGGTCAAGGTGCT
CAGCCATTCAGATTGCTGGGTCAACAACATCATGATCAAGGTAGGTGTGA
TTCATCCCTTCGTTTTGTCAAATTCGAATATACATAGTAGTGGACGTTGA
ATTGAGAATTTCTTGTCAATAATTCTAGACTGTCGCTCAAGCTTCCAAGA
GAATGTGACTACCAGAAATCTTAGCTGTAAGTTTCACCTTTAACCTTCAT
CAGGAAGAATAACCGGCTAAAACGGTAGGAAAACGCACGGATACGTGACT
TCAGTAATAGATCAAAGCTGTCAGAAAGCCTGCATTGACCCCGACTTTGT
TGAGTTCTAATGTGTGCTGCCTTTTTTACACCCCTCGCAAATAGTACGAA
GGTGACGTCCCCGTTGCAGCAAAACTGGTGGACTGGCAGGGGATCAAGTT
CTTCCCACCGACCTATGACCTGGCCCAGCTGTTCCTTTGTTGCATGAGTT
GGGACGTGTTCTACAACCACAGGGACGTTATCTTGGCTCACTATCACCAG
CAACTGCAGGAGACACTGGATCCTAGCGGTAAGAACCCGTCTTTGTCGGT
ATTGAAATGTATCTAAATAGATNATGATCCTGCCTGCCGACCAGGATCTA
CTGCGAATGGTCCAGGAGATCAAGGAGTGGGGAGTTCTGTAAACGGACCA
ACTCTGGCCACGGGTGAATTTTATTGGTCCACATATGTACAAGCTACACT
TAATCAAGTAGTGGGGAGTTCTCTAATTGGACCAACTATGGAAACTTATG
AATTGTATTGGTCCAGTTATGTACAAGGTACAATTTTTAGCAACAGTTCG
TTAGGACTCAAAATCAACTTATTAAGGTAACACTGCATTTATTAATGTAC
GTATTTCGACATCATCTTGAATCTTAGTCTTTTATTAGAATAAGCTAACA
CTTCATTTATTAATATACGTATTTCGATATCATCTTGAATCTTAGTCTTT
TATTAATCTAACTTCGATAGCTTCTTGGCATGTGACAAGGCTATGAGTGG
ATAAGTGAGATGACCAGTATATCTGATCATATTTGATTCATCATTAGTTA
CTTAATTAGTTATTATTTGTCACTTTCTTTGTATCAGAGGAGAAATTCAT
TGAACGTCAACATTAATCCAACCATTGCATGAAATAATGCTGGGTCACAC
CAGTTATTTTGGATCTTGACAGACAATTAATGGAGTGACCAGTCAAAATG
ACGCTGAGATAGACACCCATGCTACCTATGTATTTTTCAGGAACTTTCGT
GCATGATGCACAATAACATGTTATCACAAAGTATGTTAAGCTGTTCAATA
TATTTCAATAAAAACGAATTTCAGCTGTTATAGATATTTCAATAGGGTTG
AACTACTAGTTTAAAACGTCAGATTTCTTACCCAGGGCAATTAATAAAGG
AAATGCTCCTACTGTGACCTTTCCAGCAGTTTGAGGGGTGGATTGACCTC
CATAACCACATGGATTCATAAAACTATTAGACTATCTGCCAGCCAAGAAC
AATGGCAGGGACAGATACCATAATATCGGTTTAGAAAATTCAATTTTTTT
TCTGTACTGGTTTTCTGTACTGGAATATTATCAAACCATGCAGAATGGCT
CAGATATCGGTAGAAAATATCACATAGTCCAAGGAAATTTGACTAAGATA
AGATCCCTTGGGTATTGAAGACAATACTATCTACAACTTTCAGTTTTGGA
AAAATCAACATTAGCTTGTTCAAATTTTCAAACTTTCAAAACGGCCCTGT
CAACGTTGTGTCAGAGTATCTAATTGTATCTAAATTTCCAACTGGAAAAT
GTCTTCCCCACATTTAAGCTGAGGAGCTAGCATTCGAAAATCGTAAGCTA
GTTACCTACATGTACATGTTCTTATGTTTAATATGTTTTCTCTGCCTTTT
TCTGCCTGCAAAAAGCTTTGCAGTGGCCTGAGCGAATAAAGATGGGGGTC
AGCTCTCTTCATCATCTGATCTCAGTGTATATTTGTGGGAAGGCAAATTA
GGCCCATATTTTCATAACTGCTTTCTCCTAATGTTCTGCCTGCCATGAAT
TGCGTACATTACATGCATTTAAGTCATATCATGGAAAACACTGGAATTAT
AGAATTTCCTCATTGATTATGCAAATGAAGTCCTAATGTGCATACTTTGC
CTCTCATAGTGTACATCTCTGTCCAAGCTACACTGTGCCTGCATGCCGAA
TGTCATCATGGAAATCCGTCGTTCCCTTGGTCAGTTATCCTCTTTGAAAA
TGTAGAAAAAGGGACCGGGATACCAAGCAATTGCAAGCAAGTTAGTAGGG
GGCCCAAACAAACCACTTCTGTCTTACATCAAAAGCTGTCTGCCACCGAA
ACATTTTAACGACTTCAGCCATGACAGAAGATCTTTGCACTGTAGGGACC
GGCCAGACAGGAAACTGCCACTTGTTAATGAATTCAGTAAGGCCTTGTAG
TTTCCAGCTGCCTTCTAAATTTCATGATCCCTGAACGTGCTTGCCATACT
TAATCCGAAATAGCAGGAACTGGTTCAGCCCATTGACGAAGTGAAGTCAT
TGACCTACCAGCACTGTTGACCGGCAGCGAGGAAACAGCTGGCGTACGTA
TACTTCTTTATCATTAACTACAGGGTGGTTTCTATGAAGTCTTAAAGCAT
ACTATATCAATTGTCTGTTTCAGTTCGTATTTATCCCTAATTAGTTCAGA
CCCATGTAGCCTGGATAGAGAGTTAAGCACAGGCAGGGCCACAGCATATA
CAACTTGTTCAACTTCGAATAGCATCGCTCACTCTTAGGTTTATCATTGG
CACACGCTGATGGTTAATACTTTGGAATTACTTTAGGCAGATGAGCTGTT
GCAATGTTTTAAAAACCACTCTACTGTCTAGTCTGTTGTGAACAAAATGT
GTTGCTGCATACCATCACACTCGTCCTTCGGGAAGCCTATGTAACCAGGT
TCAAGGGTCACGAGCCACGACCCTGAACAAGGCCCCGGANCCCGATCAAG
GCCCCGGATGTTCACTTTCCAGTTGAGTGTGACAAGTCCCGACCAGTTGT
TATAGCACGTAGTTAGAGCGTGCACGCTTAGCAAGAGGTAAGATTGTTTA
CCTTGTAATACACCAACATATATATGCAGAGCCTGTATGTGGGTCCTGGT
TATGCACGGGCTGGGGGTATAGCGATTATGAACTACTCAAACCTCTCAAG
GCTGATCACATCCTATGCTGGGCAGATGCTAAATGCTCGGGCACAGTTGC
AAACGGGCCTCGCCATGTAGTTTCTGTTATCTGCCTTTTAGAACGCTGTC
TCTTGGCCATATGTGGCTGCAGGGCTACTTTGAGCCCCAAAGGGTTCCCC
GGTTGATTTGGACTTAGAATCAGTCAGGGTCTCGGCGTAAAACATACAGT
ACATGTCTGACCGGTCAGTTAAAACCAGACTGCACCCTATCGGACCCTTC
AGCGGTCACTCTGGTACATTTGCCGAGGCATCTGACTGTTACCTGCCGGA
TACCAATCCCTAAACGGCCCAAACCTTTCAAGAACAACAATAAAGAACGG
TCCTGCATGGGAAGCTTGAAGGAACTTTACTTGTGACCACGTACGACAGA
CATAAGCGCCGGGGACTAGACTGGCTACTGACCCCGTACTGGTCCCCTTG
CAATTGTGGCCAGATCTGATAGGGCAACACAAACAGACAGATAGTGGGGT
AAGCATATGTCATACATTTTGAGTTTGCATTTTCAGTTTTCGTCTTTCCT
CCCTATTTAAAAGGAATATGGCAACATCAGACATGATCACCACCCCACAA
TCTGCTGAAGACATCGCCCCCTCCTGGGTGCAGCAGGTACTGCAGAGGGA
CCTCCCTGACGTCACCATCACGGACGTGGATGTGAAGGGATCCATCAGTC
AAGGCGAAGGATTCCTGAGCGACATCGTCGCTTTTGATGCTGTGGGGACC
AGGAATGGTACAAGTCAGCGCTACAGTCTCGTCGCTAAACTGACCGATTT
CAAAGTGCCGCAGACTTTAATCCCTGACTTTCCGAAAGATTTTCACATCG
AAGTAGATATCCTGGAGGTGAAGTTTTACTCTATTTTGGTCCCCGATCTT
CTTTATAATGTGTCTGTCCAAAGTACAAAGCAGAAATTCCAGCCCAAAGG
TACAGATTACGGTGATTACGCCCATGCTGATTCCTTGTTCCTCCCCAAAT
GCTACTTCGCCGCCACCGACCCAAGCTCCATGGTGTCCGTCAGGGTTATG
GAGAACCTAAAAACTCAGGGGTTCTCAATCAAACCCGACCACCAACCACT
GAGTCGTGATGAGATTGTGCTGACAGTCGGGGCCCTGGCGCAGCTGCACG
GCCTGTCACATCGACTAGAGCTCCGTTTGGGCAAATCCCTTCCCGAGAAG
TACGACTGGATTCGGCCAGATACCATTTTCACAAATGAGCAAGCGATGAA
AGCCTTCGCCAACGGATTTCAGAAGTGTGTGAAGAAATTTGCAGCGGCTT
TCCCTGACCAAACAGACCTTGTTGCTCGTCTGGAGAAGCAAAATCTCCAG
ACCTTGTTTGATGTCACGAGGGGGTCGAGGCTCAAGGTGCTCAGCCATGG
AGATTGCTGGGTCAACAACATCATGATCAAGGTAGGTGTGATGCATACCT
TCTTTTTGTTAAATTCGAATATACATAGTAGTGGACGTTGAATTGAGAAT
TTCTTGTCAATAATTCTAGACTGTCACTCAAGCTCCAAGAGAATGTGACT
ACCAGAAATCTTAGCTGTAAGTTTCACCTTTAGCCTTCATCAGGAAGAAT
AACCGGCTAAAACGGTAGGAAAACGCACGGATACGTGACTTCAGTAATAG
ATCAAAGCTGTCAGAAAGCCTGTATTGACCCCGACTTTGTTGAGTTCTAA
TGTGTGCTGCCTTTTTCACACCCCTCACAAATAGTACGAAGGTGACGTCC
CCGTTGCAGCAAAACTGGTGGACTGGCAGGGGATCAAGTTCCTCCCACCG
ACCTATGACCTGGCCCAGCTGTTCCTTTGTTGCATGAGTTGGGACGTGTT
CTACAACCACAGGGACGTTATCTTGGCTCACTATCACCAGCAACTGCAGG
AGACACTGGATCCTAGCGGTAAGAACCCGTCTTTGTCGGTATTGAAATGT
ATCTANCTATGACCTGGCCCAGCTGTTCCTTTGTTGCATGAGTTGGGACG
TGTTCTACAACCACAGGGACGTTATCTTGGCTCACTATCACCAGCAACTG
CAGGAGACACTGGATCCTAGCGGTAAGAACCCGTCTTTGTCGGTATTAAA
ATGTATCTAAATAGATTACTAGTACTGTCCTCAGCTATTGCGAGAATACT
GTCCCCATCGAAAGGAATGTACTATGGACACGTAAAACTTTCCCAAAATG
TTCCAGGGCCTTGCCAAATTTCTTTTCTGATCTTGCACACTCAAGAATTG
TATTTTCACGATTGAATTTATCAGATACACATGGCATCTTTCTCTAGAGT
CGTCGGGCCTACAGAAGTACACACTGGAGCAGCTGAAGGAAGACTTCAAA
GCCGACTGTCTGTACGGAATGTGCTGCCGCGTCATGGGGTTGATGATCCT
GCCTGCCGACCAGGATCTACTGCGGATGGTCCAGGAGATCAAGGAGTGGG
GAGTTCTGTAA Coding sequence (CDS) from alignment at Sc0000086:837801..844261+ >transcript:BL95652_evm1 ID=transcript:BL95652_evm1|Name=transcript:BL95652_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=3564bp|location=Sequence derived from alignment at Sc0000086:837801..844261+ (Branchiostoma lanceolatum)
ATGACCACCATACCACAATCTGCTGAAGACATCGCCCTCTCCTGGGTGCA
GCAGGTACTGCAGAGAGACCTCCCTGGCGTCACCATCACGGACGTCGATG
TGAAGGGATCCATCAATCAAGGTGAAGGATTCCTGAGCGACATCGTCGCT
TTTGATGCTGTTGGGACCAGGAATGGTACCAGTCAGCGCTACAGCCTCGT
TGCTAAACTGACCGATTTCAAGCGCCCGCAGACTGTAATGTCTGACTTTC
CGAAAGATTTTCACATCGAAGTAGAAATCCTGGAGGTGAAGTTTTACTCC
ATTTTGGTCCCCGATCTTCTTTATAATGTGTCGGTCCAAAGTACAGAGCA
GAAATTCCAGCCCAAAGGTACAGATTTCGGTGATAACGCCCATGCCGATT
CCTTGTTCCTCCCCAAATGCTACTACGCCGCCTCCGACCCAAGCTCCATG
GTGTCCGTCAGGGTTATGGAGAACCTGAAAACTCAGGGGTTCTCAATCAA
ACCCGACCTCCAACCACTGAGCCGTGAGGAGATGATGCTGACAGTCGGGG
CCCTGGCGCAGCTGCACGGCCTGTCACATCGACTAGAGCTCCGTTTGGGC
AAACCCCTTCCCGAGAAGTACGACTGGATTCGGCCAGATACCAATGAGCA
AGCGATGGAAGCCTTCACCGACGAATTTCATAAGTGTTTGAAGAAATTCG
CAGCGGCTTTCCCTGACCAAACAGACCTTGTTGCTCGTCTGGAGAAGCAA
AACCTCAAGACTTTGTTTGATTACACGGGGGGCTCGAGGGTCAAGGTGCT
CAGCCATTCAGATTGCTGGGTCAACAACATCATGATCAAGTACGAAGGTG
ACGTCCCCGTTGCAGCAAAACTGGTGGACTGGCAGGGGATCAAGTTCTTC
CCACCGACCTATGACCTGGCCCAGCTGTTCCTTTGTTGCATGAGTTGGGA
CGTGTTCTACAACCACAGGGACGTTATCTTGGCTCACTATCACCAGCAAC
TGCAGGAGACACTGGATCCTAGCGAGTCGTCGGGCCTACAGAAGTACACA
CTGGAGCAGCTGAAGGAAGACTTCAAAGCCGACTGTCTGTACGGAATGTG
CTGCCGCGTCATGGGGTTGATGATCCTGCCTGCCGACCAGGATCTACTGC
GGATGGTCCAGGAGATCAAGGAGTGGGGAGTTCTGTAAATGACCACCATA
CCACAATCTGCTGAAGACATCGCCCTCTCCTGGGTGCAGCAGGTACTGCA
GAGAGACCTCCCTGGCGTCACCATCACGGACGTCGATGTGAAGGGATCCA
TCAATCAAGGTGAAGGATTCCTGAGCGACATCGTCGCTTTTGATGCTGTT
GGGACCAGGAATGGTACCAGTCAGCGCTACAGCCTCGTTGCTAAACTGAC
CGATTTCAAGCGCCCGCAGACTGTAATGTCTGACTTTCCGAAAGATTTTC
ACATCGAAGTAGAAATCCTGGAGGTGAAGTTTTACTCCATTTTGGTCCCC
GATCTTCTTTATAATGTGTCGGTCCAAAGTACAGAGCAGAAATTCCAGCC
CAAAGGTACAGATTTCGGTGATAACGCCCATGCCGATTCCTTGTTCCTCC
CCAAATGCTACTACGCCGCCTCCGACCCAAGCTCCATGGTGTCCGTCAGG
GTTATGGAGAACCTGAAAACTCAGGGGTTCTCAATCAAACCCGACCTCCA
ACCACTGAGCCGTGAGGAGATGATGCTGACAGTCGGGGCCCTGGCGCAGC
TGCACGGCCTGTCACATCGACTAGAGCTCCGTTTGGGCAAACCCCTTCCC
GAGAAGTACGACTGGATTCGGCCAGATACCAATGAGCAAGCGATGGAAGC
CTTCACCGACGAATTTCATAAGTGTTTGAAGAAATTCGCAGCGGCTTTCC
CTGACCAAACAGACCTTGTTGCTCGTCTGGAGAAGCAAAACCTCAAGACT
TTGTTTGATTACACGGGGGGCTCGAGGGTCAAGGTGCTCAGCCATTCAGA
TTGCTGGGTCAACAACATCATGATCAAGTACGAAGGTGACGTCCCCGTTG
CAGCAAAACTGGTGGACTGGCAGGGGATCAAGTTCTTCCCACCGACCTAT
GACCTGGCCCAGCTGTTCCTTTGTTGCATGAGTTGGGACGTGTTCTACAA
CCACAGGGACGTTATCTTGGCTCACTATCACCAGCAACTGCAGGAGACAC
TGGATCCTAGCGAGTCGTCGGGCCTACAGAAGTACACACTGGAGCAGCTG
AAGGAAGACTTCAAAGCCGACTGTCTGTACGGAATGTGCTGCCGCGTCAT
GGGGTTGATGATCCTGCCTGCCGACCAGGATCTACTGCGGATGGTCCAGG
AGATCAAGGAGTGGGGAGTTCTGTAAATGACCACCATACCACAATCTGCT
GAAGACATCGCCCTCTCCTGGGTGCAGCAGGTACTGCAGAGAGACCTCCC
TGGCGTCACCATCACGGACGTCGATGTGAAGGGATCCATCAATCAAGGTG
AAGGATTCCTGAGCGACATCGTCGCTTTTGATGCTGTTGGGACCAGGAAT
GGTACCAGTCAGCGCTACAGCCTCGTTGCTAAACTGACCGATTTCAAGCG
CCCGCAGACTGTAATGTCTGACTTTCCGAAAGATTTTCACATCGAAGTAG
AAATCCTGGAGGTGAAGTTTTACTCCATTTTGGTCCCCGATCTTCTTTAT
AATGTGTCGGTCCAAAGTACAGAGCAGAAATTCCAGCCCAAAGGTACAGA
TTTCGGTGATAACGCCCATGCCGATTCCTTGTTCCTCCCCAAATGCTACT
ACGCCGCCTCCGACCCAAGCTCCATGGTGTCCGTCAGGGTTATGGAGAAC
CTGAAAACTCAGGGGTTCTCAATCAAACCCGACCTCCAACCACTGAGCCG
TGAGGAGATGATGCTGACAGTCGGGGCCCTGGCGCAGCTGCACGGCCTGT
CACATCGACTAGAGCTCCGTTTGGGCAAACCCCTTCCCGAGAAGTACGAC
TGGATTCGGCCAGATACCAATGAGCAAGCGATGGAAGCCTTCACCGACGA
ATTTCATAAGTGTTTGAAGAAATTCGCAGCGGCTTTCCCTGACCAAACAG
ACCTTGTTGCTCGTCTGGAGAAGCAAAACCTCAAGACTTTGTTTGATTAC
ACGGGGGGCTCGAGGGTCAAGGTGCTCAGCCATTCAGATTGCTGGGTCAA
CAACATCATGATCAAGTACGAAGGTGACGTCCCCGTTGCAGCAAAACTGG
TGGACTGGCAGGGGATCAAGTTCTTCCCACCGACCTATGACCTGGCCCAG
CTGTTCCTTTGTTGCATGAGTTGGGACGTGTTCTACAACCACAGGGACGT
TATCTTGGCTCACTATCACCAGCAACTGCAGGAGACACTGGATCCTAGCG
AGTCGTCGGGCCTACAGAAGTACACACTGGAGCAGCTGAAGGAAGACTTC
AAAGCCGACTGTCTGTACGGAATGTGCTGCCGCGTCATGGGGTTGATGAT
CCTGCCTGCCGACCAGGATCTACTGCGGATGGTCCAGGAGATCAAGGAGT
GGGGAGTTCTGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000086 | genome | Sc0000086:837801..844261 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95652_evm1 |
| Biotype | protein_coding |
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