transcript:BL95518_evm2 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL95518_evm2
Unique Nametranscript:BL95518_evm2
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL95518_evm2

>transcript:BL95518_evm2-protein ID=transcript:BL95518_evm2-protein|Name=transcript:BL95518_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=107bp
MGYDGAAEQPDNHVRETFQYLVGWYGTRPVEKQYCEWEGKKMMIGSSWKT
TDCVTCACQDNGLYCYSNGIYAPIPGCMLLVDESCQIQLVDSTDPYQECG
HDHAITG
Run BLAST on NCBI

mRNA from alignment at Sc0000054:307569..308991-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL95518_evm2 ID=transcript:BL95518_evm2|Name=transcript:BL95518_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=1423bp|location=Sequence derived from alignment at Sc0000054:307569..308991- (Branchiostoma lanceolatum)
ATGGGCTACGATGGCGCCGCTGAGCAGCCAGACAACCATGTGAGAGAAAC ATTTCAGTATCTTGTCGGTTGGTCCCCTTAAACTGGATTTTCTCAATAAG AATAATTGGTAGTGTCGTGTCTTAAAAGGAGAAAATATATTGAGTGACTT CTGACCCTGTATGCTTGGATGAAAACTGAAGCCGTAGCGAAGCCGCATTG CACTAGTATTCGCTAACGAAAAAGCGTCATGATAAGGTTCTTTAACGTGC TCGAGGTGTGGAACTCCTCAAACACGGGACATCCATTAAACGTCATGTCC GAGGGAATTCCTAACCGAATCTAGGTAGTCATTTTCACATTAGTCGAGTG AAGAAGTAGGTGTAAAGTGCCTTTCCCAAGGGCACAACATCGGGACCTGT CAGGGATTCGAACTCTGTACCGTTCACGTTGTGAGTCAACATCCATAACC ACAAGACCACCCTCGTTACGTGGTGACCTTGCATATTCTAAAAACAAACA TAAAACCATGTCTCCTGTAGGTACGGTACCCGCCCCGTCGAAAAGCAGTA CTGTGAGTGGGAGGGGAAGAAGATGATGATCGGCAGCAGCTGGAAGACCA CAGACTGTGTGACGTGTGCGTGTCAAGACAACGGCCTGTACTGTTACAGG TACGTCTATGGGACAACGCAGGAGATCACAAAGATATTAGAGCTGGTATA TCAAAGTTTGACAGGTGAACGGCAAATACGGTGACAACGCAGGTAGGCAC ATAGATAAGCTAGGCTGAACCAATATCAGTCAGGAGGTGGATGTTATTGG CTTTTTATGCTTGACTGGGGTCGGACATTTCTTTATCTCCAATACAAACA TCAGATGAATGAATGGATGTTGAATGAACGATAAAAAGAAAAAGAATACA TGAATAAATTAAGGATGGATGGATGGATGGATGTAGTAAAAAGAAAGAAA GAAAAATCAATAGATAAATGAATGAGTGAAAGAATGAGAGTGAATGACTG ATGAATGAATGATGGATAGATGAATGGATGGATGATAGAAAGAAAAAGAC AAAAAATGAATGAATGAATGAACGAATGGATGAGTGCAGAAACTAGAAGA AGCATTGGACTAGCACACATTTTCCCCAAGAAACATTTTCTCACGTTAAT GAGCTGTAAATAATTCTTGGTCCTTGAATCTTAAATCTTTCTAGGTCCAT GCCTGTCTTCTTCCCAATAAAGCGCATGCCCTTAGAGCCAAGTATTCTGA GAAGTACAGAGAACTCCTATATACCAATTGATCGTATCTGCTTTTCCAGC AACGGTATCTACGCACCCATACCGGGCTGCATGCTGCTTGTGGACGAGAG TTGTCAGATACAGCTGGTGGATAGTACCGATCCTTATCAGGAATGCGGTC ATGACCACGCCATCACTGGGTAG

Coding sequence (CDS) from alignment at Sc0000054:307569..308991-

>transcript:BL95518_evm2 ID=transcript:BL95518_evm2|Name=transcript:BL95518_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=972bp|location=Sequence derived from alignment at Sc0000054:307569..308991- (Branchiostoma lanceolatum)
ATGGGCTACGATGGCGCCGCTGAGCAGCCAGACAACCATGTGAGAGAAAC
ATTTCAGTATCTTGTCGGTTGGTACGGTACCCGCCCCGTCGAAAAGCAGT
ACTGTGAGTGGGAGGGGAAGAAGATGATGATCGGCAGCAGCTGGAAGACC
ACAGACTGTGTGACGTGTGCGTGTCAAGACAACGGCCTGTACTGTTACAG
CAACGGTATCTACGCACCCATACCGGGCTGCATGCTGCTTGTGGACGAGA
GTTGTCAGATACAGCTGGTGGATAGTACCGATCCTTATCAGGAATGCGGT
CATGACCACGCCATCACTGGGTAGATGGGCTACGATGGCGCCGCTGAGCA
GCCAGACAACCATGTGAGAGAAACATTTCAGTATCTTGTCGGTTGGTACG
GTACCCGCCCCGTCGAAAAGCAGTACTGTGAGTGGGAGGGGAAGAAGATG
ATGATCGGCAGCAGCTGGAAGACCACAGACTGTGTGACGTGTGCGTGTCA
AGACAACGGCCTGTACTGTTACAGCAACGGTATCTACGCACCCATACCGG
GCTGCATGCTGCTTGTGGACGAGAGTTGTCAGATACAGCTGGTGGATAGT
ACCGATCCTTATCAGGAATGCGGTCATGACCACGCCATCACTGGGTAGAT
GGGCTACGATGGCGCCGCTGAGCAGCCAGACAACCATGTGAGAGAAACAT
TTCAGTATCTTGTCGGTTGGTACGGTACCCGCCCCGTCGAAAAGCAGTAC
TGTGAGTGGGAGGGGAAGAAGATGATGATCGGCAGCAGCTGGAAGACCAC
AGACTGTGTGACGTGTGCGTGTCAAGACAACGGCCTGTACTGTTACAGCA
ACGGTATCTACGCACCCATACCGGGCTGCATGCTGCTTGTGGACGAGAGT
TGTCAGATACAGCTGGTGGATAGTACCGATCCTTATCAGGAATGCGGTCA
TGACCACGCCATCACTGGGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL95518gene:BL95518Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL95518_evm2-E1BL95518_evm2-E1-1564476830-233271Branchiostoma lanceolatumexon
BL95518_evm2-E2BL95518_evm2-E2-1564476830-233269Branchiostoma lanceolatumexon
BL95518_evm2-E3BL95518_evm2-E3-1564476830-233267Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL95518_evm2transcript:BL95518_evm2-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000054genomeSc0000054:307569..308991 -
Properties
Property NameValue
Transcript idBL95518_evm2
Biotypeprotein_coding