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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95414_evm1 >transcript:BL95414_evm1-protein ID=transcript:BL95414_evm1-protein|Name=transcript:BL95414_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=255bp
MSDMERWRGRVALVTGASVGIGNATARALVQQGMQVVGCARNVDKIRETA
AELQQTGAAGRLYPVKCDLTVEAEIRAMFDNIESEHGGVDVCINNAGLAV
NAPLLTGSFEAFRTMTDVNILAPTLCTQLAVQQMRKRGVDDGHIITLNSM
AGHRFAVVAFYSMTKFAITAMTEGLRRELREMKSHIRASCISPAIVETEF
ATRMHEDDPQRGRDLYASIKCLQAKDIADSVLYILGAPPHVEIHDILMRP
TEQTT Run BLAST on NCBI mRNA from alignment at Sc0000038:1193136..1196622+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95414_evm1 ID=transcript:BL95414_evm1|Name=transcript:BL95414_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=3487bp|location=Sequence derived from alignment at Sc0000038:1193136..1196622+ (Branchiostoma lanceolatum)
ATGTCGGATATGGAGCGTTGGCGCGGCCGTGTAGCGCTGGTGACCGGCGC
GTCTGTGGGCATCGGGAACGCCACAGCCCGGGCACTGGTGCAGCAGGGCA
TGCAGGTGGTGGGGTGTGCACGGAACGTGGATAAAATACGGGTAGGTCGA
TCAGAAACAATGCAAAATTCAAGTGTACAGAACCGGAAACACAACATTGG
TTTTCTTAGGCCTAAGCAAAATGAGCCACGGCGTCTGCCGCTAGCTTCTA
GTTCTTTACACAAGCTGAGTTTACCTACCTATGTATCATAAATGGGCACC
TGGACTTTCCATAACGTTGTAGCTAACGTTACTCATGAGTGCCCCCACTC
TTCTATCAAGGACTGCCACACCCACTTTGAACGTGTATGCATCAATGAGC
TTGCAAATGTGAATCCTGGCCAAGTGGACTTTGCCTTCACGGGGACAGCC
CTGTTATTTGTATACTCCAACTCCAACTTTTATTCGCAAGTTAATGCCCG
TAAGGGTAACGTTACAAACAGTAGGAGCAACTTCCCACTGCAAGGGAGGG
TATCAGGTTACAGGGGCCCGGCGCGGTCCACAGGGAGACTAACGCTCACT
GTTACATCTTCTAAAAGATCATGATAGTTACAAAAACAATCTCTTGCAAG
TGTCTCGACAAAATTGAATTAAATCAGCCAACCTAAAATCCTACTGTTCT
ACGCGTGTTACTTAATTTTGTCTGGATGTTTCAGAGAGGGTGTTCGGTGG
ACTAAAAATAAAATAACTGATTTAAGTTAGTCGTAAACGTGACCAAAAAT
CCCAATGTTTTGCATAGTTTGGATAAGAACAGTAATATTTAACTTTCTGT
CTTAGGATTTTTGAAATAGCTCATTCAAATAATTTCGACGGCCGAAAAAA
GGTCGAAAAATATGGCATCTGTAGCATGTACCATAAGGGAAATATGAGGT
TTCTGCATAAATTATGTAAATGAGGTCTTCATTAGCATAATACACATTCA
GTTGTATTCACCTTCCTAAAGGTACATACACCTCCAATATGACATCCGTA
TGTCAGCAAAAATACTGTGCAAAGAGTGGTATGTATATGCGATAAAGTGG
GTGGTGTGAGTGGATCAAACCTTACAGTCGGTATATAGGCCTCAGAGTCT
TCAGCAAGTTGAAGTTGGTAGCCACAAAAAGAAAAGAAAAAGAAGAAAAG
GGCAGGATCTTGCATGACTGAAAAGTAAGAAGAGCCGCTGCATCTGTTTT
TTCCTGCAGGAAACTGCAGCAGAGCTGCAGCAGACAGGTGCTGCAGGACG
GCTGTATCCTGTCAAATGTGACCTGACAGTGGAGGCTGAGATCAGAGCCA
TGTTTGACAACATCGAGTCCGAACATGGCGGCGTGGACGTCTGCATCAAC
AACGCCGGACTGGCCGTGAACGCTCCTCTGCTGACCGGTAGTTTCGAGGC
ATTCCGGACGATGACAGATGTAAGTCTTCTGCCAATATTCTATGTATCTG
TAGATGAATCTAATAGTGCAAATTATTACTTTTGCTTCTATTTCCTACCA
CCTTTCCAAGGCTTCTACCTCGCGAGTATTAAAGATATTATTAATGTCCC
AGGCGCAGTGACAACATTAGCAGCCTGCAGTTTTTGTCTGTTCCGCTAGG
TGAACATCCTGGCCCCGACCCTCTGTACCCAGCTGGCTGTGCAGCAGATG
AGGAAGCGAGGAGTGGATGATGGACACATCATCACCTTGAACAGGTCTTT
TATTTGTCATCTCCATGAAAAATGGAGATACTGTTTTGAGTGTGTCTGTG
TTTTCGATTTTTGTAGTCAGCATAATTCAAGATATCTGGTATGTGTTCAG
GTGTTGGGAAGACGAAGGTCAATGTCGACTTTGGGCCTTGGTACTGCAGC
AGAACGTCCTTTTTTTGTATGCTTTGATCTGGCCGTGCTATGGTCTTCAT
TTTTTGGCGGTAGATAGCTTGTGATGTAAGGAAGAAGTGGTGTAGTTTTG
GGACCCCTAGCAGCTTGTTTATTTTAGATTTTATCGTTGGCGTTGTACAT
GTGTTGCCGTAATGGTTAGGGTGTATTGCCCAGAACGCAGAGGTCCTGGG
TTCGAATCCCATGTACAAAACTGGAGTGTTATGCCTAAAGCCAGCTTATC
AGTTATGCTAATCAAACAAACTCTTTAGCTGTGTTGTGTTCAAGATATAA
ATGTGAGTAAAGAACATTGCTGTATTGTTGCAGTATGGCTGGTCATCGTT
TTGCTGTTGTTGCGTTTTACTCCATGACGAAGTTTGCCATCACGGCCATG
ACTGAAGGGCTGAGGAGAGAGCTGAGGGAGATGAAGTCACACATCAGAGC
CTCGGTCAGTCTTGTAGAAACTACTGTAAACGCCTTTGAGTTTGCGGTGA
TTCAATTTCGCAGCAAGGAGAAAATGGAGTGTTCCCGGTGGATTTAAGTT
TGCGATAGCGCTATAGTCACACACTGTACCGTAACGGAAACATCGGTGAG
TTTTAAGTTTGTGCTGAGGCGGTCACCGCGAAAATCGCAATCATAAAACC
ACCGCAAATATTTCAAGAATTACAGTACTTCATTGAATTTTATAATCTAT
TACGAAAAAGATAGATTATGTTTATGCTCACATTGAAATTGAAGTTTGTT
TATGAATAGAAAAATAACTTTTACTTGTTGAGGATGATGATGATCATCCT
TTCGTCCTGTTTCCACAGTGTATTTCTCCTGCAATTGTTGAGACAGAGTT
TGCCACACGTATGCATGAAGATGACCCACAAAGGGGTCGAGATCTTTATG
CCAGTATCAAAGTAAGTTAAACTTTGTTTCTATATTCATCCTTGTGTTGT
AGGATATTCTACTTGATTAGACCAATCAATAATGATAATGTAGAATGCTA
TGGTGTCAAATACGATGTATAACAGAATAAGACATAACAAAATCCTCTTT
TTTAAAAATTCTTTCAGTGCTTACAGGCCAAGGACATTGCTGATTCGGTT
CTATATATCTTAGGTGCCCCACCACACGTGGAGGTAAGCTATATGTACTC
CAGACTTACATCATACATACATAGAGAAATGCTACATGGCCTGCATTCTT
CTACGCAGAGCTTTCTTGTGGCGGCTTACCGGGAAATACTCAGCTCAAAG
AGATTCACAGACCTTCTCTTAGGGACATGGCCACAAGCCAGCTGTCAGTC
ACTCAGAGAACTGCCTGTCAAATGTTTTCTCTAGGCATGTCTATATATTC
ATGCATAGTATCCCTACTTAATCTAATTAGATCTGATGCTGTACTACTGC
AGTGTACTGTACAGATGGATTAGACAATCACTTACAACAGTTGTAGTAAA
ACAGTTAATTTGTTATCATATCAACGTGGAACAGTAGGAAAAGTTTTTTA
GTTGTCATGAAGCGGATTTGGGAAATAATTTCTTTTTTTTTTCAGATTCA
CGACATTTTGATGAGGCCGACAGAGCAGACCACCTAA Coding sequence (CDS) from alignment at Sc0000038:1193136..1196622+ >transcript:BL95414_evm1 ID=transcript:BL95414_evm1|Name=transcript:BL95414_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=5376bp|location=Sequence derived from alignment at Sc0000038:1193136..1196622+ (Branchiostoma lanceolatum)
ATGTCGGATATGGAGCGTTGGCGCGGCCGTGTAGCGCTGGTGACCGGCGC
GTCTGTGGGCATCGGGAACGCCACAGCCCGGGCACTGGTGCAGCAGGGCA
TGCAGGTGGTGGGGTGTGCACGGAACGTGGATAAAATACGGGAAACTGCA
GCAGAGCTGCAGCAGACAGGTGCTGCAGGACGGCTGTATCCTGTCAAATG
TGACCTGACAGTGGAGGCTGAGATCAGAGCCATGTTTGACAACATCGAGT
CCGAACATGGCGGCGTGGACGTCTGCATCAACAACGCCGGACTGGCCGTG
AACGCTCCTCTGCTGACCGGTAGTTTCGAGGCATTCCGGACGATGACAGA
TGTGAACATCCTGGCCCCGACCCTCTGTACCCAGCTGGCTGTGCAGCAGA
TGAGGAAGCGAGGAGTGGATGATGGACACATCATCACCTTGAACAGTATG
GCTGGTCATCGTTTTGCTGTTGTTGCGTTTTACTCCATGACGAAGTTTGC
CATCACGGCCATGACTGAAGGGCTGAGGAGAGAGCTGAGGGAGATGAAGT
CACACATCAGAGCCTCGTGTATTTCTCCTGCAATTGTTGAGACAGAGTTT
GCCACACGTATGCATGAAGATGACCCACAAAGGGGTCGAGATCTTTATGC
CAGTATCAAATGCTTACAGGCCAAGGACATTGCTGATTCGGTTCTATATA
TCTTAGGTGCCCCACCACACGTGGAGATTCACGACATTTTGATGAGGCCG
ACAGAGCAGACCACCTAAATGTCGGATATGGAGCGTTGGCGCGGCCGTGT
AGCGCTGGTGACCGGCGCGTCTGTGGGCATCGGGAACGCCACAGCCCGGG
CACTGGTGCAGCAGGGCATGCAGGTGGTGGGGTGTGCACGGAACGTGGAT
AAAATACGGGAAACTGCAGCAGAGCTGCAGCAGACAGGTGCTGCAGGACG
GCTGTATCCTGTCAAATGTGACCTGACAGTGGAGGCTGAGATCAGAGCCA
TGTTTGACAACATCGAGTCCGAACATGGCGGCGTGGACGTCTGCATCAAC
AACGCCGGACTGGCCGTGAACGCTCCTCTGCTGACCGGTAGTTTCGAGGC
ATTCCGGACGATGACAGATGTGAACATCCTGGCCCCGACCCTCTGTACCC
AGCTGGCTGTGCAGCAGATGAGGAAGCGAGGAGTGGATGATGGACACATC
ATCACCTTGAACAGTATGGCTGGTCATCGTTTTGCTGTTGTTGCGTTTTA
CTCCATGACGAAGTTTGCCATCACGGCCATGACTGAAGGGCTGAGGAGAG
AGCTGAGGGAGATGAAGTCACACATCAGAGCCTCGTGTATTTCTCCTGCA
ATTGTTGAGACAGAGTTTGCCACACGTATGCATGAAGATGACCCACAAAG
GGGTCGAGATCTTTATGCCAGTATCAAATGCTTACAGGCCAAGGACATTG
CTGATTCGGTTCTATATATCTTAGGTGCCCCACCACACGTGGAGATTCAC
GACATTTTGATGAGGCCGACAGAGCAGACCACCTAAATGTCGGATATGGA
GCGTTGGCGCGGCCGTGTAGCGCTGGTGACCGGCGCGTCTGTGGGCATCG
GGAACGCCACAGCCCGGGCACTGGTGCAGCAGGGCATGCAGGTGGTGGGG
TGTGCACGGAACGTGGATAAAATACGGGAAACTGCAGCAGAGCTGCAGCA
GACAGGTGCTGCAGGACGGCTGTATCCTGTCAAATGTGACCTGACAGTGG
AGGCTGAGATCAGAGCCATGTTTGACAACATCGAGTCCGAACATGGCGGC
GTGGACGTCTGCATCAACAACGCCGGACTGGCCGTGAACGCTCCTCTGCT
GACCGGTAGTTTCGAGGCATTCCGGACGATGACAGATGTGAACATCCTGG
CCCCGACCCTCTGTACCCAGCTGGCTGTGCAGCAGATGAGGAAGCGAGGA
GTGGATGATGGACACATCATCACCTTGAACAGTATGGCTGGTCATCGTTT
TGCTGTTGTTGCGTTTTACTCCATGACGAAGTTTGCCATCACGGCCATGA
CTGAAGGGCTGAGGAGAGAGCTGAGGGAGATGAAGTCACACATCAGAGCC
TCGTGTATTTCTCCTGCAATTGTTGAGACAGAGTTTGCCACACGTATGCA
TGAAGATGACCCACAAAGGGGTCGAGATCTTTATGCCAGTATCAAATGCT
TACAGGCCAAGGACATTGCTGATTCGGTTCTATATATCTTAGGTGCCCCA
CCACACGTGGAGATTCACGACATTTTGATGAGGCCGACAGAGCAGACCAC
CTAAATGTCGGATATGGAGCGTTGGCGCGGCCGTGTAGCGCTGGTGACCG
GCGCGTCTGTGGGCATCGGGAACGCCACAGCCCGGGCACTGGTGCAGCAG
GGCATGCAGGTGGTGGGGTGTGCACGGAACGTGGATAAAATACGGGAAAC
TGCAGCAGAGCTGCAGCAGACAGGTGCTGCAGGACGGCTGTATCCTGTCA
AATGTGACCTGACAGTGGAGGCTGAGATCAGAGCCATGTTTGACAACATC
GAGTCCGAACATGGCGGCGTGGACGTCTGCATCAACAACGCCGGACTGGC
CGTGAACGCTCCTCTGCTGACCGGTAGTTTCGAGGCATTCCGGACGATGA
CAGATGTGAACATCCTGGCCCCGACCCTCTGTACCCAGCTGGCTGTGCAG
CAGATGAGGAAGCGAGGAGTGGATGATGGACACATCATCACCTTGAACAG
TATGGCTGGTCATCGTTTTGCTGTTGTTGCGTTTTACTCCATGACGAAGT
TTGCCATCACGGCCATGACTGAAGGGCTGAGGAGAGAGCTGAGGGAGATG
AAGTCACACATCAGAGCCTCGTGTATTTCTCCTGCAATTGTTGAGACAGA
GTTTGCCACACGTATGCATGAAGATGACCCACAAAGGGGTCGAGATCTTT
ATGCCAGTATCAAATGCTTACAGGCCAAGGACATTGCTGATTCGGTTCTA
TATATCTTAGGTGCCCCACCACACGTGGAGATTCACGACATTTTGATGAG
GCCGACAGAGCAGACCACCTAAATGTCGGATATGGAGCGTTGGCGCGGCC
GTGTAGCGCTGGTGACCGGCGCGTCTGTGGGCATCGGGAACGCCACAGCC
CGGGCACTGGTGCAGCAGGGCATGCAGGTGGTGGGGTGTGCACGGAACGT
GGATAAAATACGGGAAACTGCAGCAGAGCTGCAGCAGACAGGTGCTGCAG
GACGGCTGTATCCTGTCAAATGTGACCTGACAGTGGAGGCTGAGATCAGA
GCCATGTTTGACAACATCGAGTCCGAACATGGCGGCGTGGACGTCTGCAT
CAACAACGCCGGACTGGCCGTGAACGCTCCTCTGCTGACCGGTAGTTTCG
AGGCATTCCGGACGATGACAGATGTGAACATCCTGGCCCCGACCCTCTGT
ACCCAGCTGGCTGTGCAGCAGATGAGGAAGCGAGGAGTGGATGATGGACA
CATCATCACCTTGAACAGTATGGCTGGTCATCGTTTTGCTGTTGTTGCGT
TTTACTCCATGACGAAGTTTGCCATCACGGCCATGACTGAAGGGCTGAGG
AGAGAGCTGAGGGAGATGAAGTCACACATCAGAGCCTCGTGTATTTCTCC
TGCAATTGTTGAGACAGAGTTTGCCACACGTATGCATGAAGATGACCCAC
AAAGGGGTCGAGATCTTTATGCCAGTATCAAATGCTTACAGGCCAAGGAC
ATTGCTGATTCGGTTCTATATATCTTAGGTGCCCCACCACACGTGGAGAT
TCACGACATTTTGATGAGGCCGACAGAGCAGACCACCTAAATGTCGGATA
TGGAGCGTTGGCGCGGCCGTGTAGCGCTGGTGACCGGCGCGTCTGTGGGC
ATCGGGAACGCCACAGCCCGGGCACTGGTGCAGCAGGGCATGCAGGTGGT
GGGGTGTGCACGGAACGTGGATAAAATACGGGAAACTGCAGCAGAGCTGC
AGCAGACAGGTGCTGCAGGACGGCTGTATCCTGTCAAATGTGACCTGACA
GTGGAGGCTGAGATCAGAGCCATGTTTGACAACATCGAGTCCGAACATGG
CGGCGTGGACGTCTGCATCAACAACGCCGGACTGGCCGTGAACGCTCCTC
TGCTGACCGGTAGTTTCGAGGCATTCCGGACGATGACAGATGTGAACATC
CTGGCCCCGACCCTCTGTACCCAGCTGGCTGTGCAGCAGATGAGGAAGCG
AGGAGTGGATGATGGACACATCATCACCTTGAACAGTATGGCTGGTCATC
GTTTTGCTGTTGTTGCGTTTTACTCCATGACGAAGTTTGCCATCACGGCC
ATGACTGAAGGGCTGAGGAGAGAGCTGAGGGAGATGAAGTCACACATCAG
AGCCTCGTGTATTTCTCCTGCAATTGTTGAGACAGAGTTTGCCACACGTA
TGCATGAAGATGACCCACAAAGGGGTCGAGATCTTTATGCCAGTATCAAA
TGCTTACAGGCCAAGGACATTGCTGATTCGGTTCTATATATCTTAGGTGC
CCCACCACACGTGGAGATTCACGACATTTTGATGAGGCCGACAGAGCAGA
CCACCTAAATGTCGGATATGGAGCGTTGGCGCGGCCGTGTAGCGCTGGTG
ACCGGCGCGTCTGTGGGCATCGGGAACGCCACAGCCCGGGCACTGGTGCA
GCAGGGCATGCAGGTGGTGGGGTGTGCACGGAACGTGGATAAAATACGGG
AAACTGCAGCAGAGCTGCAGCAGACAGGTGCTGCAGGACGGCTGTATCCT
GTCAAATGTGACCTGACAGTGGAGGCTGAGATCAGAGCCATGTTTGACAA
CATCGAGTCCGAACATGGCGGCGTGGACGTCTGCATCAACAACGCCGGAC
TGGCCGTGAACGCTCCTCTGCTGACCGGTAGTTTCGAGGCATTCCGGACG
ATGACAGATGTGAACATCCTGGCCCCGACCCTCTGTACCCAGCTGGCTGT
GCAGCAGATGAGGAAGCGAGGAGTGGATGATGGACACATCATCACCTTGA
ACAGTATGGCTGGTCATCGTTTTGCTGTTGTTGCGTTTTACTCCATGACG
AAGTTTGCCATCACGGCCATGACTGAAGGGCTGAGGAGAGAGCTGAGGGA
GATGAAGTCACACATCAGAGCCTCGTGTATTTCTCCTGCAATTGTTGAGA
CAGAGTTTGCCACACGTATGCATGAAGATGACCCACAAAGGGGTCGAGAT
CTTTATGCCAGTATCAAATGCTTACAGGCCAAGGACATTGCTGATTCGGT
TCTATATATCTTAGGTGCCCCACCACACGTGGAGATTCACGACATTTTGA
TGAGGCCGACAGAGCAGACCACCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000038 | genome | Sc0000038:1193136..1196622 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95414_evm1 |
| Biotype | protein_coding |
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