|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95293_evm1 >transcript:BL95293_evm1-protein ID=transcript:BL95293_evm1-protein|Name=transcript:BL95293_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=339bp
MLWPSTNLRIGMEVFTLLEIIAVLWVTYLVVTWWLERGRLSQLTDKTVLI TGCDTGFGNLLARRLDQLGLRVIAGCLTEAGVAELRQSCSERLQPIQMDV TSSDSVQDAFRVVKEAVGSLWGLMNNAGILGVAGGTMEWATLEDYQAVLN VNLLGMIDVTKTFLPLLKKSRGRVVNVASGAGRLAMAHDGPYAVSKYGVG AFSDSLRRAMRCSGVKVHIIEPGAFRTKLTNQEVVLRRLDHTWQRQNSET KAEYGEEFLQAAKDAIAIGDGYQQDPVAVVDAMEHALCATHPRSRYVVGW DARFIFVPLSWLPTDLGDLVIRLMASNMMPTPVCCKNGQ Run BLAST on NCBI mRNA from alignment at Sc0000017:3121541..3124548- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95293_evm1 ID=transcript:BL95293_evm1|Name=transcript:BL95293_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=3008bp|location=Sequence derived from alignment at Sc0000017:3121541..3124548- (Branchiostoma lanceolatum) ATGCTCTGGCCGTCGACGAATTTACGGTAAGGATATACGTACTGGTTTTT
ATCTAAGTTCAAAGTACATATAGAGAGCACTGTGCACAGGGAGATCCAAA
CGACTCGTTCCAAATGCTAGACGAGGTCACACAGACAAAAACCGAAAACA
GTAGTCAAGAGAAATCTTGAGGACAGGTAAGGATTTGAAACTTCGTCACA
TCAAGTTTGGTTACTAGGTACTTACTAGGTCACTATCTTTGACATAATAG
AATTTCAAACTTTTAAAATGGGGTTCAAAGTTATCAAAACAAAAATATGA
CCTTGAAAGATCTATAGGTACTGTAGTGTAGGTAGGAGGGCGCCATGTTT
ATTACTCTCGATCTCGTACCCAGGATTGGCATGGAGGTGTTCACGTTACT
TGAGATCATCGCTGTCCTGTGGGTGACGTATTTAGTGGTTACTTGGTGGT
TGGAGAGAGGACGCCTTTCACAGGTCAGTGCAACAAAGCGATACACCTTG
TTCCTGCTTCTAAGAAATGTATATGTTGTTTATCACAATTAGGAGGGTCA
CGATTCCAAGTACGCATGTGTAGCGAAATGCATTGAGAATAATATGTCAA
AAGTGAAGTCACCTGAAATCGTTGCCTACATTTTGAGAAACGATCTAGTA
TTGGTATTTAGAGGGTTAAAGACCTAGATGTATGTGGTCAATTCTTGCAG
AGAAGAAAACCATTTGACTATTTTTAACTATGTATGTGACATATTTACAT
TTGTATATATACGTATCAACGGGTTGAGTCCGTGTACAACCTGCTGTATA
CACTTCATAATATTCGATGGGAAACGACGACAAATTTATGCTTGGGAGAA
GCGCCCGACAGAACATATAAAACACAAGGTGTCTTTCGTCCCTGTAGCTA
ACAGACAAGACCGTCCTGATCACGGGGTGTGATACCGGCTTCGGGAACCT
CCTGGCCAGGCGGCTGGACCAGCTCGGCCTGCGGGTGATCGCGGGCTGTC
TGACCGAGGCCGGCGTGGCAGAGTTACGGCAGTCCTGCTCCGAAAGACTG
CAGCCGATCCAGATGGACGTCACCAGCTCAGACAGCGTACAAGATGCGTT
CAGGGTGGTGAAGGAAGCTGTAGGGAGTAAATGGAAAAAGTGCGTTTTAA
TACCACTGAACCTGAAAATCATCGTAGCATTTGTTGCCTTTCGTACTGTG
TTGAACATTTCTGTTGCCTTTAAGTAAACCATGATACCAATGAACTATTC
CTGATGCTAAAATGGTTTAGTTTGTTATTCAGTTTTACAAGTTTTGTGTA
CTTTCTAGGTTTGTGGGGGCTGATGAACAATGCGGGTATTCTCGGTGTTG
CGGGAGGGACCATGGAGTGGGCGACCCTGGAAGACTATCAGGTTTGTAAA
ATATAAACCTAATTTAGACTGAGACCTTTTCCTTACTTTGTAATAACAGA
TGGGCAAAACATGGATGAGGTGTTAAAGACAAGAAATATCATCAAGTAAT
TGATAACTTTATTGCAAGTTTTTTGCCCGAAGGCTTATTGCAGACAAACA
AGTAACGTTACATGGAAATACATGGGAATCGAAAAAGTTATCTAGTCTAC
AGTGAAAGTTCTAAGTTAACTAAGGTTGACTATGGTTGGGTTTGACTTCT
TTTTTTGAAGGCAGTGGAAAATGAAGAGACCCATGTTTTGTATTATAAGT
GTATTGTAAGTGGGTTGGTTAATAACCAATTTAGTCAGTGGTAAAGAACT
ACGAGCTTCTCTATCGTTTATTACATTATCATGATTGTGTTGTTCTTTAA
TATAACCTTCCCCTTGTGACTTTTGCATCACCAGGCCGTTCTGAACGTGA
ACTTGCTGGGAATGATTGACGTCACAAAGACATTTCTCCCCCTCCTCAAG
AAGTCACGTGGTCGGGTCGTCAACGTTGCAAGTGGTGCCGGGAGACTGGC
CATGGCCCACGACGGACCTTACGCCGTGTCTAAATATGGCGTTGGGGCAT
TTTCTGATTCTTTGAGGTAAAAGCTAGCTTTCTACACATTTAGCCCCACA
GCCCTCAGTCCCTGTTTCAAACCGATCTTATGATTTCAATGTGTCTATAT
CATTTAGAAAGAGAGATGCAAATCCTCTTAGAAATCAAAAGTTGGTTGCA
TTCTGGTGAAGAAATTGAAGCTTTCTTTTCGTTGATACTGTCTTCAAATT
TACATTTGCCTAGACGAGCTATGAGATGCTCTGGGGTCAAAGTTCACATC
ATTGAGCCTGGGGCCTTCAGGACTAAACTCACCAATCAGGAGGTCGTCCT
GCGTCGTCTGGACCACACCTGGCAACGGCAGAATTCGGAGACGAAGGCCG
AGTATGGAGAGGAGTTCCTACAAGCCGGTCAGTAAATCATGCATTAGTGT
TTACTTTCTTTTATTATTGTAATCCAACGCAAGAGTTTGCCCATCATGAT
TAGTTCTTCATCAGGAATTTGGCCAAGTTTTCTGACGCGCACTGATCTTC
CCGATGAGACGTGACGTCATGAGTAGGTCGAAGGTGCCAGGAAGTCGATA
CCTAACACCGTCCCGTCTCAACGTGGGTCGATGAGTCCTAAAGTAAATTT
CTACAAACAAAATATTGTGGATATTAGTGCTGCATACTTGAAAAGAGACT
TGGTAAAGATATCATCCATATTCGTACAAATACATAGAAAATCTTATGCT
GGAAGTTGAATTATGGAAAATTGGATTCCCTACAATAAAATAGATCAAAA
CGTTTTCTTTCTATCTTGACAGCAAAGGACGCTATAGCGATTGGGGACGG
TTACCAGCAAGACCCGGTTGCCGTTGTGGATGCGATGGAGCATGCGCTGT
GCGCCACCCACCCCCGGAGCCGTTACGTGGTTGGTTGGGACGCCCGTTTC
ATTTTTGTTCCACTTTCCTGGCTGCCCACCGACCTGGGTGATCTGGTCAT
ACGACTGATGGCATCCAACATGATGCCTACACCTGTTTGCTGTAAGAATG
GGCAATAG Coding sequence (CDS) from alignment at Sc0000017:3121541..3124548- >transcript:BL95293_evm1 ID=transcript:BL95293_evm1|Name=transcript:BL95293_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=7140bp|location=Sequence derived from alignment at Sc0000017:3121541..3124548- (Branchiostoma lanceolatum) ATGCTCTGGCCGTCGACGAATTTACGGATTGGCATGGAGGTGTTCACGTT ACTTGAGATCATCGCTGTCCTGTGGGTGACGTATTTAGTGGTTACTTGGT GGTTGGAGAGAGGACGCCTTTCACAGCTAACAGACAAGACCGTCCTGATC ACGGGGTGTGATACCGGCTTCGGGAACCTCCTGGCCAGGCGGCTGGACCA GCTCGGCCTGCGGGTGATCGCGGGCTGTCTGACCGAGGCCGGCGTGGCAG AGTTACGGCAGTCCTGCTCCGAAAGACTGCAGCCGATCCAGATGGACGTC ACCAGCTCAGACAGCGTACAAGATGCGTTCAGGGTGGTGAAGGAAGCTGT AGGGAGTTTGTGGGGGCTGATGAACAATGCGGGTATTCTCGGTGTTGCGG GAGGGACCATGGAGTGGGCGACCCTGGAAGACTATCAGGCCGTTCTGAAC GTGAACTTGCTGGGAATGATTGACGTCACAAAGACATTTCTCCCCCTCCT CAAGAAGTCACGTGGTCGGGTCGTCAACGTTGCAAGTGGTGCCGGGAGAC TGGCCATGGCCCACGACGGACCTTACGCCGTGTCTAAATATGGCGTTGGG GCATTTTCTGATTCTTTGAGACGAGCTATGAGATGCTCTGGGGTCAAAGT TCACATCATTGAGCCTGGGGCCTTCAGGACTAAACTCACCAATCAGGAGG TCGTCCTGCGTCGTCTGGACCACACCTGGCAACGGCAGAATTCGGAGACG AAGGCCGAGTATGGAGAGGAGTTCCTACAAGCCGCAAAGGACGCTATAGC GATTGGGGACGGTTACCAGCAAGACCCGGTTGCCGTTGTGGATGCGATGG AGCATGCGCTGTGCGCCACCCACCCCCGGAGCCGTTACGTGGTTGGTTGG GACGCCCGTTTCATTTTTGTTCCACTTTCCTGGCTGCCCACCGACCTGGG TGATCTGGTCATACGACTGATGGCATCCAACATGATGCCTACACCTGTTT GCTGTAAGAATGGGCAATAGATGCTCTGGCCGTCGACGAATTTACGGATT GGCATGGAGGTGTTCACGTTACTTGAGATCATCGCTGTCCTGTGGGTGAC GTATTTAGTGGTTACTTGGTGGTTGGAGAGAGGACGCCTTTCACAGCTAA CAGACAAGACCGTCCTGATCACGGGGTGTGATACCGGCTTCGGGAACCTC CTGGCCAGGCGGCTGGACCAGCTCGGCCTGCGGGTGATCGCGGGCTGTCT GACCGAGGCCGGCGTGGCAGAGTTACGGCAGTCCTGCTCCGAAAGACTGC AGCCGATCCAGATGGACGTCACCAGCTCAGACAGCGTACAAGATGCGTTC AGGGTGGTGAAGGAAGCTGTAGGGAGTTTGTGGGGGCTGATGAACAATGC GGGTATTCTCGGTGTTGCGGGAGGGACCATGGAGTGGGCGACCCTGGAAG ACTATCAGGCCGTTCTGAACGTGAACTTGCTGGGAATGATTGACGTCACA AAGACATTTCTCCCCCTCCTCAAGAAGTCACGTGGTCGGGTCGTCAACGT TGCAAGTGGTGCCGGGAGACTGGCCATGGCCCACGACGGACCTTACGCCG TGTCTAAATATGGCGTTGGGGCATTTTCTGATTCTTTGAGACGAGCTATG AGATGCTCTGGGGTCAAAGTTCACATCATTGAGCCTGGGGCCTTCAGGAC TAAACTCACCAATCAGGAGGTCGTCCTGCGTCGTCTGGACCACACCTGGC AACGGCAGAATTCGGAGACGAAGGCCGAGTATGGAGAGGAGTTCCTACAA GCCGCAAAGGACGCTATAGCGATTGGGGACGGTTACCAGCAAGACCCGGT TGCCGTTGTGGATGCGATGGAGCATGCGCTGTGCGCCACCCACCCCCGGA GCCGTTACGTGGTTGGTTGGGACGCCCGTTTCATTTTTGTTCCACTTTCC TGGCTGCCCACCGACCTGGGTGATCTGGTCATACGACTGATGGCATCCAA CATGATGCCTACACCTGTTTGCTGTAAGAATGGGCAATAGATGCTCTGGC CGTCGACGAATTTACGGATTGGCATGGAGGTGTTCACGTTACTTGAGATC ATCGCTGTCCTGTGGGTGACGTATTTAGTGGTTACTTGGTGGTTGGAGAG AGGACGCCTTTCACAGCTAACAGACAAGACCGTCCTGATCACGGGGTGTG ATACCGGCTTCGGGAACCTCCTGGCCAGGCGGCTGGACCAGCTCGGCCTG CGGGTGATCGCGGGCTGTCTGACCGAGGCCGGCGTGGCAGAGTTACGGCA GTCCTGCTCCGAAAGACTGCAGCCGATCCAGATGGACGTCACCAGCTCAG ACAGCGTACAAGATGCGTTCAGGGTGGTGAAGGAAGCTGTAGGGAGTTTG TGGGGGCTGATGAACAATGCGGGTATTCTCGGTGTTGCGGGAGGGACCAT GGAGTGGGCGACCCTGGAAGACTATCAGGCCGTTCTGAACGTGAACTTGC TGGGAATGATTGACGTCACAAAGACATTTCTCCCCCTCCTCAAGAAGTCA CGTGGTCGGGTCGTCAACGTTGCAAGTGGTGCCGGGAGACTGGCCATGGC CCACGACGGACCTTACGCCGTGTCTAAATATGGCGTTGGGGCATTTTCTG ATTCTTTGAGACGAGCTATGAGATGCTCTGGGGTCAAAGTTCACATCATT GAGCCTGGGGCCTTCAGGACTAAACTCACCAATCAGGAGGTCGTCCTGCG TCGTCTGGACCACACCTGGCAACGGCAGAATTCGGAGACGAAGGCCGAGT ATGGAGAGGAGTTCCTACAAGCCGCAAAGGACGCTATAGCGATTGGGGAC GGTTACCAGCAAGACCCGGTTGCCGTTGTGGATGCGATGGAGCATGCGCT GTGCGCCACCCACCCCCGGAGCCGTTACGTGGTTGGTTGGGACGCCCGTT TCATTTTTGTTCCACTTTCCTGGCTGCCCACCGACCTGGGTGATCTGGTC ATACGACTGATGGCATCCAACATGATGCCTACACCTGTTTGCTGTAAGAA TGGGCAATAGATGCTCTGGCCGTCGACGAATTTACGGATTGGCATGGAGG TGTTCACGTTACTTGAGATCATCGCTGTCCTGTGGGTGACGTATTTAGTG GTTACTTGGTGGTTGGAGAGAGGACGCCTTTCACAGCTAACAGACAAGAC CGTCCTGATCACGGGGTGTGATACCGGCTTCGGGAACCTCCTGGCCAGGC GGCTGGACCAGCTCGGCCTGCGGGTGATCGCGGGCTGTCTGACCGAGGCC GGCGTGGCAGAGTTACGGCAGTCCTGCTCCGAAAGACTGCAGCCGATCCA GATGGACGTCACCAGCTCAGACAGCGTACAAGATGCGTTCAGGGTGGTGA AGGAAGCTGTAGGGAGTTTGTGGGGGCTGATGAACAATGCGGGTATTCTC GGTGTTGCGGGAGGGACCATGGAGTGGGCGACCCTGGAAGACTATCAGGC CGTTCTGAACGTGAACTTGCTGGGAATGATTGACGTCACAAAGACATTTC TCCCCCTCCTCAAGAAGTCACGTGGTCGGGTCGTCAACGTTGCAAGTGGT GCCGGGAGACTGGCCATGGCCCACGACGGACCTTACGCCGTGTCTAAATA TGGCGTTGGGGCATTTTCTGATTCTTTGAGACGAGCTATGAGATGCTCTG GGGTCAAAGTTCACATCATTGAGCCTGGGGCCTTCAGGACTAAACTCACC AATCAGGAGGTCGTCCTGCGTCGTCTGGACCACACCTGGCAACGGCAGAA TTCGGAGACGAAGGCCGAGTATGGAGAGGAGTTCCTACAAGCCGCAAAGG ACGCTATAGCGATTGGGGACGGTTACCAGCAAGACCCGGTTGCCGTTGTG GATGCGATGGAGCATGCGCTGTGCGCCACCCACCCCCGGAGCCGTTACGT GGTTGGTTGGGACGCCCGTTTCATTTTTGTTCCACTTTCCTGGCTGCCCA CCGACCTGGGTGATCTGGTCATACGACTGATGGCATCCAACATGATGCCT ACACCTGTTTGCTGTAAGAATGGGCAATAGATGCTCTGGCCGTCGACGAA TTTACGGATTGGCATGGAGGTGTTCACGTTACTTGAGATCATCGCTGTCC TGTGGGTGACGTATTTAGTGGTTACTTGGTGGTTGGAGAGAGGACGCCTT TCACAGCTAACAGACAAGACCGTCCTGATCACGGGGTGTGATACCGGCTT CGGGAACCTCCTGGCCAGGCGGCTGGACCAGCTCGGCCTGCGGGTGATCG CGGGCTGTCTGACCGAGGCCGGCGTGGCAGAGTTACGGCAGTCCTGCTCC GAAAGACTGCAGCCGATCCAGATGGACGTCACCAGCTCAGACAGCGTACA AGATGCGTTCAGGGTGGTGAAGGAAGCTGTAGGGAGTTTGTGGGGGCTGA TGAACAATGCGGGTATTCTCGGTGTTGCGGGAGGGACCATGGAGTGGGCG ACCCTGGAAGACTATCAGGCCGTTCTGAACGTGAACTTGCTGGGAATGAT TGACGTCACAAAGACATTTCTCCCCCTCCTCAAGAAGTCACGTGGTCGGG TCGTCAACGTTGCAAGTGGTGCCGGGAGACTGGCCATGGCCCACGACGGA CCTTACGCCGTGTCTAAATATGGCGTTGGGGCATTTTCTGATTCTTTGAG ACGAGCTATGAGATGCTCTGGGGTCAAAGTTCACATCATTGAGCCTGGGG CCTTCAGGACTAAACTCACCAATCAGGAGGTCGTCCTGCGTCGTCTGGAC CACACCTGGCAACGGCAGAATTCGGAGACGAAGGCCGAGTATGGAGAGGA GTTCCTACAAGCCGCAAAGGACGCTATAGCGATTGGGGACGGTTACCAGC AAGACCCGGTTGCCGTTGTGGATGCGATGGAGCATGCGCTGTGCGCCACC CACCCCCGGAGCCGTTACGTGGTTGGTTGGGACGCCCGTTTCATTTTTGT TCCACTTTCCTGGCTGCCCACCGACCTGGGTGATCTGGTCATACGACTGA TGGCATCCAACATGATGCCTACACCTGTTTGCTGTAAGAATGGGCAATAG ATGCTCTGGCCGTCGACGAATTTACGGATTGGCATGGAGGTGTTCACGTT ACTTGAGATCATCGCTGTCCTGTGGGTGACGTATTTAGTGGTTACTTGGT GGTTGGAGAGAGGACGCCTTTCACAGCTAACAGACAAGACCGTCCTGATC ACGGGGTGTGATACCGGCTTCGGGAACCTCCTGGCCAGGCGGCTGGACCA GCTCGGCCTGCGGGTGATCGCGGGCTGTCTGACCGAGGCCGGCGTGGCAG AGTTACGGCAGTCCTGCTCCGAAAGACTGCAGCCGATCCAGATGGACGTC ACCAGCTCAGACAGCGTACAAGATGCGTTCAGGGTGGTGAAGGAAGCTGT AGGGAGTTTGTGGGGGCTGATGAACAATGCGGGTATTCTCGGTGTTGCGG GAGGGACCATGGAGTGGGCGACCCTGGAAGACTATCAGGCCGTTCTGAAC GTGAACTTGCTGGGAATGATTGACGTCACAAAGACATTTCTCCCCCTCCT CAAGAAGTCACGTGGTCGGGTCGTCAACGTTGCAAGTGGTGCCGGGAGAC TGGCCATGGCCCACGACGGACCTTACGCCGTGTCTAAATATGGCGTTGGG GCATTTTCTGATTCTTTGAGACGAGCTATGAGATGCTCTGGGGTCAAAGT TCACATCATTGAGCCTGGGGCCTTCAGGACTAAACTCACCAATCAGGAGG TCGTCCTGCGTCGTCTGGACCACACCTGGCAACGGCAGAATTCGGAGACG AAGGCCGAGTATGGAGAGGAGTTCCTACAAGCCGCAAAGGACGCTATAGC GATTGGGGACGGTTACCAGCAAGACCCGGTTGCCGTTGTGGATGCGATGG AGCATGCGCTGTGCGCCACCCACCCCCGGAGCCGTTACGTGGTTGGTTGG GACGCCCGTTTCATTTTTGTTCCACTTTCCTGGCTGCCCACCGACCTGGG TGATCTGGTCATACGACTGATGGCATCCAACATGATGCCTACACCTGTTT GCTGTAAGAATGGGCAATAGATGCTCTGGCCGTCGACGAATTTACGGATT GGCATGGAGGTGTTCACGTTACTTGAGATCATCGCTGTCCTGTGGGTGAC GTATTTAGTGGTTACTTGGTGGTTGGAGAGAGGACGCCTTTCACAGCTAA CAGACAAGACCGTCCTGATCACGGGGTGTGATACCGGCTTCGGGAACCTC CTGGCCAGGCGGCTGGACCAGCTCGGCCTGCGGGTGATCGCGGGCTGTCT GACCGAGGCCGGCGTGGCAGAGTTACGGCAGTCCTGCTCCGAAAGACTGC AGCCGATCCAGATGGACGTCACCAGCTCAGACAGCGTACAAGATGCGTTC AGGGTGGTGAAGGAAGCTGTAGGGAGTTTGTGGGGGCTGATGAACAATGC GGGTATTCTCGGTGTTGCGGGAGGGACCATGGAGTGGGCGACCCTGGAAG ACTATCAGGCCGTTCTGAACGTGAACTTGCTGGGAATGATTGACGTCACA AAGACATTTCTCCCCCTCCTCAAGAAGTCACGTGGTCGGGTCGTCAACGT TGCAAGTGGTGCCGGGAGACTGGCCATGGCCCACGACGGACCTTACGCCG TGTCTAAATATGGCGTTGGGGCATTTTCTGATTCTTTGAGACGAGCTATG AGATGCTCTGGGGTCAAAGTTCACATCATTGAGCCTGGGGCCTTCAGGAC TAAACTCACCAATCAGGAGGTCGTCCTGCGTCGTCTGGACCACACCTGGC AACGGCAGAATTCGGAGACGAAGGCCGAGTATGGAGAGGAGTTCCTACAA GCCGCAAAGGACGCTATAGCGATTGGGGACGGTTACCAGCAAGACCCGGT TGCCGTTGTGGATGCGATGGAGCATGCGCTGTGCGCCACCCACCCCCGGA GCCGTTACGTGGTTGGTTGGGACGCCCGTTTCATTTTTGTTCCACTTTCC TGGCTGCCCACCGACCTGGGTGATCTGGTCATACGACTGATGGCATCCAA CATGATGCCTACACCTGTTTGCTGTAAGAATGGGCAATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000017 | genome | Sc0000017:3121541..3124548 - |
Properties
Property Name | Value |
Transcript id | BL95293_evm1 |
Biotype | protein_coding |
|