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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95195_evm1 >transcript:BL95195_evm1-protein ID=transcript:BL95195_evm1-protein|Name=transcript:BL95195_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=249bp
MDERRRQAAVGQYKMYKCLVIVAALVTAGCMAALIVCGVTIVKPIVETNS
LEFQETTCTTTRGYLTGEDVDCGCGKNCQSSYPCLRMTVSYADKDGSTYS
GVLFDTEQRLNKDGHRGECVTAPCDRSGEENRKEVEGFLDTHAAGRTYKC
LYNPHDTKQVLLKRLFAWGDMFHSMLWSTLGFVFFAGITLYLALRCKAIT
SGAQPGPVHPPPYPGRQDPYPKPLQMQPPHQDPYKTSYSTHANKGFMYN Run BLAST on NCBI mRNA from alignment at Sc0000010:846126..849171- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95195_evm1 ID=transcript:BL95195_evm1|Name=transcript:BL95195_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=3046bp|location=Sequence derived from alignment at Sc0000010:846126..849171- (Branchiostoma lanceolatum)
ATGGACGAACGGCGCCGCCAAGCTGCAGTGGGTCAGTACAAAATGTACAA
ATGCCTGGTGATCGTAGCTGCACTCGTAACGGCAGGCTGCATGGCTGCCC
TTATCGTCTGTGGAGTCACCATCGTCAAACCGATCGTGGAGACGAACTCT
TTAGAGTTCCAGGAGACCACCTGTACCACAACAAGGGGTTATCTGACTGG
TAAGCGCCCTTTTGTGGCCATGATAAACTACTGCGTATAATTTCGTTTCT
TTGGGTCGATAACTAAGCTGCGCAACTGTGGGTCAAAGTAGAAAACAACT
TCTTCCTCTTAAACTTGACTTAAATCCAAAAAAAATGTCAATGGGCAACT
CATACGCGGAATATACGCACACGTGTGATAGTCAAGTCAAGTCAAAGTTT
ATTGCACAACAATTGTAACAGGTACAATGTAAGGCAAAATACTACTACAT
CTAGCTATATATACTAATGTAGTAAAATTACATGAATGTTTCCAGGCTAT
ACAATGTTGCCAATGACAGAAAGTATCAACTGGATACTTACATTAGTATA
TTAATCTAGTACAAACTACATGACGGATCTAGGCTATACAATATTGTCAA
CGGTAGATAGGGCCCTAATATGATGTACAGCTGCCTACAATTTGCATCCT
TCAGTATGTATAAATAATGCATGGTGAATGCAAGCGTGAAATGTGTATTT
ATGATTGCTTCTACTTGAATATACCCATCATGGGCACTTGGGTTGTCATA
TTTTCAGAACTCGCTAGGTTTGATTGCAAAGTCTATGTCTTTGGATATGA
AGTGTGTGTTTTTTTCATTCACAATCATCTATTGGGGATGGAGCAGAAAA
GCAAAATGCTACATATAAGAGACTCTCGTCAGCATCAGCAGATATCAAAT
AATTGCATTGAGGAATAGCACAGCTCAACCGACAGTAAAAATACAACACG
GACAATGGAAAACAATCAAGGGGAAACAAGACGACTAAATGTAGAGTCAA
TCACAAAAACCTTCCTAGTGTACAATCAATCTAAGTATAAACTATATTGA
TAAGTAAAGGTTTTATTTTGTAAGTATGAAAATTAAGAATACTTAGTGTA
TAAATAGTGAGCAGTATTGACTATACTATAGTAGTTTCCTTCAAACTGAA
CTGTGTTGCTGGTTTAGGTATGAACTATACTATAGGTATTGTACTGTAGT
TTTCTTCAACCTGAGCTTTGTTGCTGGTTTAGGTGAGGACGTTGACTGTG
GCTGTGGTAAGAACTGTCAGTCCTCATACCCCTGTCTGCGCATGACCGTG
TCGTACGCTGATAAAGACGGCTCCACCTACAGCGGTGTGCTGTTTGACAC
CGAACAAAGGCTAAACAAAGATGGACACAGGGGAGAGGTATTTAATCAGT
CCTTATGGAAAAGTTTATGTTCTCCAAATTAGAAAAATGGAATCCATTGA
GTTTTCTTATACATGTATATACAACTATACATGACTGTTTTAATCATTGT
AAGAAGTAATACTGTACAGTGCAATGTCGTACAGTTTGTAAATGATAACA
TGTACAATATCATAAATCATTTGAATCGTTGACTCTTTTTAACCATTGTA
AACTGAATGTAAATGTTATCTAGCCTAAATTTATTATAGCTCCCGAGTCT
CCTCTCCGCAAATAAGAGACTCGGGAGCTATGAAACAAATCAAAGGAGCG
AGTAGAAACAAGTGATCCCAACCGAGATTCGAACCCACGCCGAAACCGGC
AGCCTAGATCACAGGCACGCACGCCTTAACCACTAGGCTAAAAGGTCGCG
ACCAGTTAGACCTGTCAGTTGGAGGCTCTTGAACCCCCACTGTTAAAGCT
ATAATAGGTTTGGATGCCAGGCTACCGTTGCCTACAATAGATTTAAATGA
GTTCGTATTTATCTGGCATCTTGGTCTGTAGGATCTGTAGTGTGTGACGG
CACCATGTGATCGCAGCGGGGAAGAGAACCGTAAGGAAGTCGAGGGCTTC
CTGGACACACACGCCGCTGGGAGGACATACAAGTGTCTGTACAACCCTCA
TGATACCAAGGTAACCTAACCAATGGCATTTAGATGAATATAATAAATTA
TATATCATTGCAGTCAAACCTGTCTAGCGTGAACACTCACGTGGAAATGC
TCACAGTAGCTTACCGAAGCCCAGAACAAATGCTCAGAAAAAGCGATTCT
TGTATAGAATGTCCAGCACCTGGAATGGTTTGAAAGTGTTAAGTAGTTTA
GTATTGTCAGCTTTGTATAATTGTATATACACAGCCTCATTCTTCTTTTA
TCATTTATGTACATATGTAAATTCTGTGGTATTAATGTGTGTCATGTAGT
TTTGTCCAGTCATGTTTTTGAATGGACCACAGGAAGAGTAGCTGTTAAGC
TAAGTGTGGATCCTAATAAACTCAACTCAACAGTACACGAGTTACATGTA
CCACTATAGACCGATGAGTCATTGGGGAAAATGATGCAAGAGGCCACAAA
AAGTAGCTACAATGTCCTCTTGAATTTACCTAGATGGGCTACCAACAGAC
CCCGGCACATTGACCAGCCATGTAGACCAAACGTATTAAGACCATGATAA
TGTGATTGCATGTATACCATGTGCTGTATAACAAATGAGGTTGGATGTAT
GATTCACTACTGACAGCTTTGGTTTCCAAAGTTGGTTTCGCATGCCCTAT
CAGTATGATGAAACTGTGTAGGCCAAGATCAAGTTGCTGTTTTACATTTT
TTTATCGTTTCGTCTTGCAGCAAGTCCTGCTAAAGAGGCTGTTCGCGTGG
GGCGACATGTTCCACTCCATGCTGTGGAGCACACTCGGGTTCGTCTTCTT
TGCCGGCATCACCTTGTACCTCGCCCTGCGGTGTAAGGCCATCACGTCAG
GTGCACAGCCCGGGCCCGTCCATCCACCTCCCTATCCGGGACGACAAGAC
CCTTATCCTAAACCACTGCAGATGCAACCCCCACATCAGGACCCTTACAA
GACCTCCTACTCCACACATGCAAATAAGGGATTTATGTACAACTGA Coding sequence (CDS) from alignment at Sc0000010:846126..849171- >transcript:BL95195_evm1 ID=transcript:BL95195_evm1|Name=transcript:BL95195_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=3000bp|location=Sequence derived from alignment at Sc0000010:846126..849171- (Branchiostoma lanceolatum)
ATGGACGAACGGCGCCGCCAAGCTGCAGTGGGTCAGTACAAAATGTACAA
ATGCCTGGTGATCGTAGCTGCACTCGTAACGGCAGGCTGCATGGCTGCCC
TTATCGTCTGTGGAGTCACCATCGTCAAACCGATCGTGGAGACGAACTCT
TTAGAGTTCCAGGAGACCACCTGTACCACAACAAGGGGTTATCTGACTGG
TGAGGACGTTGACTGTGGCTGTGGTAAGAACTGTCAGTCCTCATACCCCT
GTCTGCGCATGACCGTGTCGTACGCTGATAAAGACGGCTCCACCTACAGC
GGTGTGCTGTTTGACACCGAACAAAGGCTAAACAAAGATGGACACAGGGG
AGAGTGTGTGACGGCACCATGTGATCGCAGCGGGGAAGAGAACCGTAAGG
AAGTCGAGGGCTTCCTGGACACACACGCCGCTGGGAGGACATACAAGTGT
CTGTACAACCCTCATGATACCAAGCAAGTCCTGCTAAAGAGGCTGTTCGC
GTGGGGCGACATGTTCCACTCCATGCTGTGGAGCACACTCGGGTTCGTCT
TCTTTGCCGGCATCACCTTGTACCTCGCCCTGCGGTGTAAGGCCATCACG
TCAGGTGCACAGCCCGGGCCCGTCCATCCACCTCCCTATCCGGGACGACA
AGACCCTTATCCTAAACCACTGCAGATGCAACCCCCACATCAGGACCCTT
ACAAGACCTCCTACTCCACACATGCAAATAAGGGATTTATGTACAACTGA
ATGGACGAACGGCGCCGCCAAGCTGCAGTGGGTCAGTACAAAATGTACAA
ATGCCTGGTGATCGTAGCTGCACTCGTAACGGCAGGCTGCATGGCTGCCC
TTATCGTCTGTGGAGTCACCATCGTCAAACCGATCGTGGAGACGAACTCT
TTAGAGTTCCAGGAGACCACCTGTACCACAACAAGGGGTTATCTGACTGG
TGAGGACGTTGACTGTGGCTGTGGTAAGAACTGTCAGTCCTCATACCCCT
GTCTGCGCATGACCGTGTCGTACGCTGATAAAGACGGCTCCACCTACAGC
GGTGTGCTGTTTGACACCGAACAAAGGCTAAACAAAGATGGACACAGGGG
AGAGTGTGTGACGGCACCATGTGATCGCAGCGGGGAAGAGAACCGTAAGG
AAGTCGAGGGCTTCCTGGACACACACGCCGCTGGGAGGACATACAAGTGT
CTGTACAACCCTCATGATACCAAGCAAGTCCTGCTAAAGAGGCTGTTCGC
GTGGGGCGACATGTTCCACTCCATGCTGTGGAGCACACTCGGGTTCGTCT
TCTTTGCCGGCATCACCTTGTACCTCGCCCTGCGGTGTAAGGCCATCACG
TCAGGTGCACAGCCCGGGCCCGTCCATCCACCTCCCTATCCGGGACGACA
AGACCCTTATCCTAAACCACTGCAGATGCAACCCCCACATCAGGACCCTT
ACAAGACCTCCTACTCCACACATGCAAATAAGGGATTTATGTACAACTGA
ATGGACGAACGGCGCCGCCAAGCTGCAGTGGGTCAGTACAAAATGTACAA
ATGCCTGGTGATCGTAGCTGCACTCGTAACGGCAGGCTGCATGGCTGCCC
TTATCGTCTGTGGAGTCACCATCGTCAAACCGATCGTGGAGACGAACTCT
TTAGAGTTCCAGGAGACCACCTGTACCACAACAAGGGGTTATCTGACTGG
TGAGGACGTTGACTGTGGCTGTGGTAAGAACTGTCAGTCCTCATACCCCT
GTCTGCGCATGACCGTGTCGTACGCTGATAAAGACGGCTCCACCTACAGC
GGTGTGCTGTTTGACACCGAACAAAGGCTAAACAAAGATGGACACAGGGG
AGAGTGTGTGACGGCACCATGTGATCGCAGCGGGGAAGAGAACCGTAAGG
AAGTCGAGGGCTTCCTGGACACACACGCCGCTGGGAGGACATACAAGTGT
CTGTACAACCCTCATGATACCAAGCAAGTCCTGCTAAAGAGGCTGTTCGC
GTGGGGCGACATGTTCCACTCCATGCTGTGGAGCACACTCGGGTTCGTCT
TCTTTGCCGGCATCACCTTGTACCTCGCCCTGCGGTGTAAGGCCATCACG
TCAGGTGCACAGCCCGGGCCCGTCCATCCACCTCCCTATCCGGGACGACA
AGACCCTTATCCTAAACCACTGCAGATGCAACCCCCACATCAGGACCCTT
ACAAGACCTCCTACTCCACACATGCAAATAAGGGATTTATGTACAACTGA
ATGGACGAACGGCGCCGCCAAGCTGCAGTGGGTCAGTACAAAATGTACAA
ATGCCTGGTGATCGTAGCTGCACTCGTAACGGCAGGCTGCATGGCTGCCC
TTATCGTCTGTGGAGTCACCATCGTCAAACCGATCGTGGAGACGAACTCT
TTAGAGTTCCAGGAGACCACCTGTACCACAACAAGGGGTTATCTGACTGG
TGAGGACGTTGACTGTGGCTGTGGTAAGAACTGTCAGTCCTCATACCCCT
GTCTGCGCATGACCGTGTCGTACGCTGATAAAGACGGCTCCACCTACAGC
GGTGTGCTGTTTGACACCGAACAAAGGCTAAACAAAGATGGACACAGGGG
AGAGTGTGTGACGGCACCATGTGATCGCAGCGGGGAAGAGAACCGTAAGG
AAGTCGAGGGCTTCCTGGACACACACGCCGCTGGGAGGACATACAAGTGT
CTGTACAACCCTCATGATACCAAGCAAGTCCTGCTAAAGAGGCTGTTCGC
GTGGGGCGACATGTTCCACTCCATGCTGTGGAGCACACTCGGGTTCGTCT
TCTTTGCCGGCATCACCTTGTACCTCGCCCTGCGGTGTAAGGCCATCACG
TCAGGTGCACAGCCCGGGCCCGTCCATCCACCTCCCTATCCGGGACGACA
AGACCCTTATCCTAAACCACTGCAGATGCAACCCCCACATCAGGACCCTT
ACAAGACCTCCTACTCCACACATGCAAATAAGGGATTTATGTACAACTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000010 | genome | Sc0000010:846126..849171 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95195_evm1 |
| Biotype | protein_coding |
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