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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95020_evm4 >transcript:BL95020_evm4-protein ID=transcript:BL95020_evm4-protein|Name=transcript:BL95020_evm4|organism=Branchiostoma lanceolatum|type=polypeptide|length=328bp
LLEPEDENGSQIPHLDRRDDNGKEVVDTGVGPYFGADLPPNRSKLQTCTE
PVKHFVFIKTHKTGSTTVCVMLYRFGLKNNLNFVLPRIPVNVGWPLPLRA
EDYIPPKDGLKPFDLLVDHTVYHRRIMDNLMPTDTAYIAMLRHPLHHIKS
VFNFYNIPRQLNMKGFKNPLEEFLRNPIKYQRPMQKGDKHKPFSFTRNFM
AFDLGFPAGLAGDMDAAQAYVERLDREFDLVIILEYLDESLVLLKRTLCW
TIQDILYNVFNEAPGYRFKMELTPEMDANYRKWSKVDYLLYEHFNTSLRN
RASELGDDFRQEVAHFVTVQNRVKTFCE Run BLAST on NCBI mRNA from alignment at Sc0000001:5891449..5893493- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95020_evm4 ID=transcript:BL95020_evm4|Name=transcript:BL95020_evm4|organism=Branchiostoma lanceolatum|type=mRNA|length=2045bp|location=Sequence derived from alignment at Sc0000001:5891449..5893493- (Branchiostoma lanceolatum)
ACTACTAGAGCCTGAAGACGAAAATGGGTCACAAATACCTCACCTGGACC
GACGTGACGACAACGGGAAAGAAGTCGTCGACACAGGCGTGGGGCCGTAC
TTTGGAGCTGACTTACCACCTAACAGGGTAAACACAGCTTTGAACTGCCT
TTCAATCACAGCTCTCTAGTACCAGCTTCTCAAAGGCCCAGCATATAAAA
GTTAAGATATGACTTGTTTTGTGAAGTCGTTCTCCCTGGTTAGTTTGTTT
CAAATACTAGTACCAGGGAAACCGCCTCAAGGCACCAGTCTTGTACAGTA
AAAACAAGCTGCGTAAAGCCCCCCTCTCACTGGACCCGCTGCAAGCTGGC
GGCGTCGCTGCATCCTAAACTGGATTTGTGTTGCCCTTGACTTTATAATG
CATGGTAATATTATTCAAACCGTACAAACATGACCAAAAAGATAACAAAA
CACAAAGCTTTAAAAAATTCGAATGCTTTGTCAATTCAATCGGCCGCAGC
GACACCGCCAGCATGCCGCGGGTCCAGTGAGAGGGGGGCTTATAAAGACC
GTACTATAAGGTAAATCCGGGATGGACCCCTGGTTAGATATAGAGCCCTA
TCATTTTCAAGTTCGGTGAGTTCTTAAACGTACTTGATGTGACACGGGGC
ATTCGGTTTGACGCCCCATGAAGACGTAATTTCTAACCAAACCTAGGTGC
ATGTTGTTATGATCACATGAGTCGAGTGAAAAAATAGCTAAAAGGTGCCT
TCCCCAAGGGCACAATATCAGGGTCTGCCAGGGATTCCAATCTAATAACT
CATAACCACAAGGCCACATTGAAGTATGCTATTTATATTATCGCAGCTGT
ATCCAACGACAAATAAGTCTACAGCTTCGACAAAGTAGACAATAACGTAT
TCCTAATTTCTATTTTTCAGTCAAAGCTACAAACGTGCACCGAGCCTGTG
AAACACTTTGTCTTCATCAAGACTCACAAGACAGGTTCCACAACAGTCTG
CGTCATGCTGTACCGGTTCGGCCTCAAAAACAACCTAAACTTCGTGCTTC
CGCGGATCCCGGTCAACGTGGGCTGGCCGTTACCCCTTCGGGCAGAAGAC
TACATCCCGCCGAAGGACGGCCTGAAGCCCTTCGATCTGCTCGTCGATCA
TACGGTCTACCACAGACGGATCATGGACAACCTGATGCCGACTGACACAG
CGTACATTGCTATGCTCCGGCACCCCTTACATCACATCAAGTCAGTCTTC
AACTTTTACAACATCCCGCGCCAACTTAACATGAAAGGTTTTAAAAACCC
TCTGGAAGAATTTTTGAGAAACCCTATCAAATATCAGAGGCCTATGCAGA
AGGGTGACAAGCATAAACCTTTCTCGTTTACACGGAACTTCATGGCCTTT
GATCTGGGATTTCCGGCTGGGCTGGCCGGAGACATGGATGCGGCACAGGC
CTATGTAGAACGGTTGGATAGGGAATTCGACTTGGTTATCATCCTGGAGT
ACCTGGACGAATCGCTAGTCCTCCTGAAACGCACCCTGTGTTGGACCATT
CAAGACATCTTGTACAACGTCTTCAACGAAGCTCCCGGGTACAGATTCAA
AATGGAGCTAACTTCAGAGATGGACGCGAACTACAGGAAATGGAGTAAGG
TGGACTACCTACTGTACGAGCATTTCAACACTTCTCTTCGGAATCGTGCA
TCAGAACTAGGGGACGATTTTCGCCAGGAAGTGGCACATTTTGTTACAGT
TCAGAATCGGGTTAAAACGTTTTGTGAGGGTAAGGATGAACAACTAGTCA
TCCAGCCTTCCAAGTGGGACAACGAGTTCTCTGTAAACCAGAAGTNGCTC
CCAGGTACAGATTCAAAATGGAGCTAACTCCAGAGATGGACGCGAACTAC
AGGAAATGGAGTAAGGTGGACTACCTACTGTACGAGCATTTCAACACTTC
TCTTCGGAATCGTGCATCAGAACTAGGGGACGATTTTCGCCAGGAAGTGG
CACATTTTGTTACAGTTCAGAATCGGGTTAAAACGTTTTGTGAGG Coding sequence (CDS) from alignment at Sc0000001:5891449..5893493- >transcript:BL95020_evm4 ID=transcript:BL95020_evm4|Name=transcript:BL95020_evm4|organism=Branchiostoma lanceolatum|type=CDS|length=2955bp|location=Sequence derived from alignment at Sc0000001:5891449..5893493- (Branchiostoma lanceolatum)
CTACTAGAGCCTGAAGACGAAAATGGGTCACAAATACCTCACCTGGACCG
ACGTGACGACAACGGGAAAGAAGTCGTCGACACAGGCGTGGGGCCGTACT
TTGGAGCTGACTTACCACCTAACAGGTCAAAGCTACAAACGTGCACCGAG
CCTGTGAAACACTTTGTCTTCATCAAGACTCACAAGACAGGTTCCACAAC
AGTCTGCGTCATGCTGTACCGGTTCGGCCTCAAAAACAACCTAAACTTCG
TGCTTCCGCGGATCCCGGTCAACGTGGGCTGGCCGTTACCCCTTCGGGCA
GAAGACTACATCCCGCCGAAGGACGGCCTGAAGCCCTTCGATCTGCTCGT
CGATCATACGGTCTACCACAGACGGATCATGGACAACCTGATGCCGACTG
ACACAGCGTACATTGCTATGCTCCGGCACCCCTTACATCACATCAAGTCA
GTCTTCAACTTTTACAACATCCCGCGCCAACTTAACATGAAAGGTTTTAA
AAACCCTCTGGAAGAATTTTTGAGAAACCCTATCAAATATCAGAGGCCTA
TGCAGAAGGGTGACAAGCATAAACCTTTCTCGTTTACACGGAACTTCATG
GCCTTTGATCTGGGATTTCCGGCTGGGCTGGCCGGAGACATGGATGCGGC
ACAGGCCTATGTAGAACGGTTGGATAGGGAATTCGACTTGGTTATCATCC
TGGAGTACCTGGACGAATCGCTAGTCCTCCTGAAACGCACCCTGTGTTGG
ACCATTCAAGACATCTTGTACAACGTCTTCAACGAAGCTCCCGGGTACAG
ATTCAAAATGGAGCTAACTCCAGAGATGGACGCGAACTACAGGAAATGGA
GTAAGGTGGACTACCTACTGTACGAGCATTTCAACACTTCTCTTCGGAAT
CGTGCATCAGAACTAGGGGACGATTTTCGCCAGGAAGTGGCACATTTTGT
TACAGTTCAGAATCGGGTTAAAACGTTTTGTGAGGCTACTAGAGCCTGAA
GACGAAAATGGGTCACAAATACCTCACCTGGACCGACGTGACGACAACGG
GAAAGAAGTCGTCGACACAGGCGTGGGGCCGTACTTTGGAGCTGACTTAC
CACCTAACAGGTCAAAGCTACAAACGTGCACCGAGCCTGTGAAACACTTT
GTCTTCATCAAGACTCACAAGACAGGTTCCACAACAGTCTGCGTCATGCT
GTACCGGTTCGGCCTCAAAAACAACCTAAACTTCGTGCTTCCGCGGATCC
CGGTCAACGTGGGCTGGCCGTTACCCCTTCGGGCAGAAGACTACATCCCG
CCGAAGGACGGCCTGAAGCCCTTCGATCTGCTCGTCGATCATACGGTCTA
CCACAGACGGATCATGGACAACCTGATGCCGACTGACACAGCGTACATTG
CTATGCTCCGGCACCCCTTACATCACATCAAGTCAGTCTTCAACTTTTAC
AACATCCCGCGCCAACTTAACATGAAAGGTTTTAAAAACCCTCTGGAAGA
ATTTTTGAGAAACCCTATCAAATATCAGAGGCCTATGCAGAAGGGTGACA
AGCATAAACCTTTCTCGTTTACACGGAACTTCATGGCCTTTGATCTGGGA
TTTCCGGCTGGGCTGGCCGGAGACATGGATGCGGCACAGGCCTATGTAGA
ACGGTTGGATAGGGAATTCGACTTGGTTATCATCCTGGAGTACCTGGACG
AATCGCTAGTCCTCCTGAAACGCACCCTGTGTTGGACCATTCAAGACATC
TTGTACAACGTCTTCAACGAAGCTCCCGGGTACAGATTCAAAATGGAGCT
AACTCCAGAGATGGACGCGAACTACAGGAAATGGAGTAAGGTGGACTACC
TACTGTACGAGCATTTCAACACTTCTCTTCGGAATCGTGCATCAGAACTA
GGGGACGATTTTCGCCAGGAAGTGGCACATTTTGTTACAGTTCAGAATCG
GGTTAAAACGTTTTGTGAGGCTACTAGAGCCTGAAGACGAAAATGGGTCA
CAAATACCTCACCTGGACCGACGTGACGACAACGGGAAAGAAGTCGTCGA
CACAGGCGTGGGGCCGTACTTTGGAGCTGACTTACCACCTAACAGGTCAA
AGCTACAAACGTGCACCGAGCCTGTGAAACACTTTGTCTTCATCAAGACT
CACAAGACAGGTTCCACAACAGTCTGCGTCATGCTGTACCGGTTCGGCCT
CAAAAACAACCTAAACTTCGTGCTTCCGCGGATCCCGGTCAACGTGGGCT
GGCCGTTACCCCTTCGGGCAGAAGACTACATCCCGCCGAAGGACGGCCTG
AAGCCCTTCGATCTGCTCGTCGATCATACGGTCTACCACAGACGGATCAT
GGACAACCTGATGCCGACTGACACAGCGTACATTGCTATGCTCCGGCACC
CCTTACATCACATCAAGTCAGTCTTCAACTTTTACAACATCCCGCGCCAA
CTTAACATGAAAGGTTTTAAAAACCCTCTGGAAGAATTTTTGAGAAACCC
TATCAAATATCAGAGGCCTATGCAGAAGGGTGACAAGCATAAACCTTTCT
CGTTTACACGGAACTTCATGGCCTTTGATCTGGGATTTCCGGCTGGGCTG
GCCGGAGACATGGATGCGGCACAGGCCTATGTAGAACGGTTGGATAGGGA
ATTCGACTTGGTTATCATCCTGGAGTACCTGGACGAATCGCTAGTCCTCC
TGAAACGCACCCTGTGTTGGACCATTCAAGACATCTTGTACAACGTCTTC
AACGAAGCTCCCGGGTACAGATTCAAAATGGAGCTAACTCCAGAGATGGA
CGCGAACTACAGGAAATGGAGTAAGGTGGACTACCTACTGTACGAGCATT
TCAACACTTCTCTTCGGAATCGTGCATCAGAACTAGGGGACGATTTTCGC
CAGGAAGTGGCACATTTTGTTACAGTTCAGAATCGGGTTAAAACGTTTTG
TGAGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000001 | genome | Sc0000001:5891449..5893493 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95020_evm4 |
| Biotype | protein_coding |
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