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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL88701_cuf0 >transcript:BL88701_cuf0-protein ID=transcript:BL88701_cuf0-protein|Name=transcript:BL88701_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=365bp
MSTVWLVKVEPGTETGRDTQARTPWRSVDKTSLLTLTEYRLRSHCVDRLP
SVMSAPMFAEVEMVTRLGGPIVDCVEWLQEHNLLATNMDCLNCAGDVEME
FVPRRDISDKFTWRCPTAACRTSRSIRTGSIFAQFPKIDLRVWLRFIVKW
TEGKLVKDIQQELRVIGSVSEHTLCKMCKELRDVCERNLIIVPVIPMGGP
GTVLQMDESVFRKKPKFRRGRRARPIWIFGMVRTDITPCIGYMEVVDRRN
ADTLLPIIERCVLPNSTLYSDEWSAYRNVGNLPNVSRHYTVNHSRHFVDP
QTGIHTQNIESYWSRKKEKLKAMHGCFGRDLHSYIQELLWRERYCLTPHE
GFQNFIEEISEQFRV Run BLAST on NCBI mRNA from alignment at xfSc0000129:873..3894- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL88701_cuf0 ID=transcript:BL88701_cuf0|Name=transcript:BL88701_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=3022bp|location=Sequence derived from alignment at xfSc0000129:873..3894- (Branchiostoma lanceolatum)
GTTTTACCAGCGATAGGACGGAGCCTGGTACGGGTCTGGTACCCAGCCTG
CCTGGATGGCAGACCAGAATGACCATGGCAGAAAAAACTATATCTCTAAA
TGATTAGAGGTCTAGGACCAAGTCTGTGAGCGGGGGCATGTGGCTTTCTT
GGGCCGAAGGGATACAGTATCCTCTCTGGCACCCGGGCTAGGTCTCAGCG
AGGTCGCGTCGAGAACGCCGTCAAGTGGAATGGGGACCTTAGTTCTATCG
CCTCTACACTCTCATTTCTTTCTTATTCTCCATTTCTCAATATAAAAGAA
ATACTTTGATGACAGTTTAACGTAATAGGCTAGCCTGTATTAAAGTAGGC
AGTACATTGAAAGGTACTGCAGATCACGCTTTTTTATTTTGCCGGTCTGT
ACTGTAAAGCTATCTAAACTCGAGAAAATGTCCCGCATTAGTGATTTCCG
TTGATTGCATTTGACCAGAACGTGGAAAACGTTTAGCTCCGCCCTTGTTA
GCCACTCACCGCTCGAGCCATGTGAGTTGTCTGATGACCTCAAAGGTCCT
GATCTACAACATCGCTGTCTCTGATTAAGCCCGCGCTCTCACCCAGCAGA
AGAAGCCCGGAGATGCCATATGTTTGAATTTTGGGCTTAGAAATTATGTC
ATATGCAACGGGAGCGAGTTTGGCAACACTCGTCCCAATGACAGTTGGAT
TTTCCCAGCATGCGTTGTGCACACAAAATGCGTTCTCCTTCCCGTGACAC
AACCCGCTTGGCACTGGGCGTGGGTTTAATTAAAGAAGGAAAATGATAGC
CTACATGGCTATGTATGATGGATATCCCGAGTGTCATCCTGTTTCAGTTC
CAGGCTCTACCTTCACCAAAGGAGGACTTGTTTATTTACACGAAGACGAA
AGGACGGACGAAAAGTGTGAAAAAAATTAGTTGATTAAGTACTTGTTTGT
CTTGTCTTGTCTAGTCTTCCTTCTTTGATTATGTTATACCCAAATTAAAA
ACGGGACTTGCTTATTTATCTTAGATAGGCTACAGTGCCTGCTTTTTGGC
AGATTTAAACTGTTTAAAAATTATCATGACGAGTTTACAAACATTTGACG
AAAAACTAATTGTGATCTTTGTCTATATAACTTGGGATCTTTGTCTATCT
CTGAAATATAATCAACTCTGTGTTTTGGTTCATTTCTTTTGGCCATTACT
GGTATGTGTGGTTCGTATTAAGATGTGGTCCCTACAGAGATACCACGTGG
AGAAAGTCGTTAGGCTGAGTGACAAGGACAATTCCCGTGGAGCTCTAATG
GAAGGAACCAATCAGCATGCCCGTCCAGATTTCTGGACGAATACAATTAT
TCCAGACAATTTGAATGTCAACTGTTTGGTTGGTGAAGGTAGAGCCTGGA
ACTGAAACAGGCCGTGATACTCAGGCTAGGACACCGTGGAGAAGCGTGGA
TAAAACCTCCTTGCTAACACTTACGGAGTATCGCCTCCGATCTCACTGTG
TTGACCGCTTACCGTCAGTCATGTCGGCGCCAATGTTTGCAGAAGTGGAA
ATGGTGACAAGACTAGGAGGGCCCATTGTCGACTGCGTGGAGTGGTTACA
AGAGCATAATCTGTTGGCGACTAACATGGACTGCCTTAATTGTGCGGGAG
ATGTTGAGATGGAGTTTGTGCCACGGAGGGACATCAGTGACAAGTTCACA
TGGCGCTGTCCAACGGCAGCGTGCCGCACGTCGCGATCAATTCGGACCGG
CTCGATATTCGCTCAATTCCCGAAAATTGACTTGCGAGTATGGCTGAGAT
TCATTGTCAAGTGGACGGAAGGGAAACTGGTGAAAGACATCCAACAGGAA
CTCCGTGTCATTGGCAGTGTTAGTGAGCACACGTTGTGCAAAATGTGTAA
GGAGCTTCGTGATGTTTGCGAAAGGAATTTAATCATCGTACCAGTCATCC
CAATGGGAGGTCCGGGTACCGTACTTCAAATGGATGAATCTGTCTTTAGA
AAGAAGCCAAAATTCAGGAGGGGACGGAGGGCGCGGCCAATATGGATTTT
CGGGATGGTGAGAACTGATATAACGCCATGTATAGGGTATATGGAAGTGG
TTGACAGACGGAATGCGGACACATTGCTACCGATCATTGAAAGGTGTGTA
TTGCCCAATTCCACCTTGTATTCTGATGAGTGGAGCGCTTACAGGAATGT
AGGAAATCTGCCAAATGTTTCCCGCCACTACACGGTAAACCACTCCCGTC
ACTTTGTGGATCCACAGACCGGCATTCACACACAGAACATTGAGAGCTAT
TGGAGCAGAAAAAAGGAGAAATTAAAAGCCATGCATGGTTGTTTTGGTCG
TGACTTACACTCATACATCCAAGAACTCCTTTGGCGGGAACGTTATTGCT
TGACACCGCATGAAGGTTTTCAAAACTTCATTGAAGAGATTTCAGAACAG
TTCAGAGTTTAATGTCCTCCACCTGGCCACATGGGGTGGAAACAACCGGT
TTAACCGTTACCGGTGGAGGGTAATGAGTTAGCGGACAAACAAGCTAAAA
TAGCACCTGAAGAAGCTAAAATGTTGCAGGGACATACCACTTGGACTACT
GAAGGAAATATACAACATTTATGAAGTGTACAACATACAGGAGGAAGACA
AAACTGCTGACCTAGTTACCTTAGCATGAATGGGGGAGAACCCAGGAGAA
AAACTGACGAAAGGTTCTACATGGCCTTCTCTAAATATGTTGAAGATACA
GGAAGATTTGACAAAGAGACAGCATCCTAAGTACGCATGTGCAGAGTACC
TGAGGACAACAACAACAACAGTACGAAGACTGCCCTGTGAAAAAGGGAAG
TAGCACTAGTTCTTTAAAAAAAAATCAAAAGTCTGTTTGAAAGCATTTAT
TGTAAAATGTAGATCTACAGCGATGACTTATAGTCATTTTTACTTGTATG
ATAATTAGCATAGAGTTTGAGTAAGCATTGTTTGAGTTATTTTATACACA
TTAAATTGTCTGTTAACTTTCA Coding sequence (CDS) from alignment at xfSc0000129:873..3894- >transcript:BL88701_cuf0 ID=transcript:BL88701_cuf0|Name=transcript:BL88701_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1098bp|location=Sequence derived from alignment at xfSc0000129:873..3894- (Branchiostoma lanceolatum)
ATGTCAACTGTTTGGTTGGTGAAGGTAGAGCCTGGAACTGAAACAGGCCG
TGATACTCAGGCTAGGACACCGTGGAGAAGCGTGGATAAAACCTCCTTGC
TAACACTTACGGAGTATCGCCTCCGATCTCACTGTGTTGACCGCTTACCG
TCAGTCATGTCGGCGCCAATGTTTGCAGAAGTGGAAATGGTGACAAGACT
AGGAGGGCCCATTGTCGACTGCGTGGAGTGGTTACAAGAGCATAATCTGT
TGGCGACTAACATGGACTGCCTTAATTGTGCGGGAGATGTTGAGATGGAG
TTTGTGCCACGGAGGGACATCAGTGACAAGTTCACATGGCGCTGTCCAAC
GGCAGCGTGCCGCACGTCGCGATCAATTCGGACCGGCTCGATATTCGCTC
AATTCCCGAAAATTGACTTGCGAGTATGGCTGAGATTCATTGTCAAGTGG
ACGGAAGGGAAACTGGTGAAAGACATCCAACAGGAACTCCGTGTCATTGG
CAGTGTTAGTGAGCACACGTTGTGCAAAATGTGTAAGGAGCTTCGTGATG
TTTGCGAAAGGAATTTAATCATCGTACCAGTCATCCCAATGGGAGGTCCG
GGTACCGTACTTCAAATGGATGAATCTGTCTTTAGAAAGAAGCCAAAATT
CAGGAGGGGACGGAGGGCGCGGCCAATATGGATTTTCGGGATGGTGAGAA
CTGATATAACGCCATGTATAGGGTATATGGAAGTGGTTGACAGACGGAAT
GCGGACACATTGCTACCGATCATTGAAAGGTGTGTATTGCCCAATTCCAC
CTTGTATTCTGATGAGTGGAGCGCTTACAGGAATGTAGGAAATCTGCCAA
ATGTTTCCCGCCACTACACGGTAAACCACTCCCGTCACTTTGTGGATCCA
CAGACCGGCATTCACACACAGAACATTGAGAGCTATTGGAGCAGAAAAAA
GGAGAAATTAAAAGCCATGCATGGTTGTTTTGGTCGTGACTTACACTCAT
ACATCCAAGAACTCCTTTGGCGGGAACGTTATTGCTTGACACCGCATGAA
GGTTTTCAAAACTTCATTGAAGAGATTTCAGAACAGTTCAGAGTTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0000129 | genome | xfSc0000129:873..3894 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL88701_cuf0 |
| Biotype | protein_coding |
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