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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL86116_cuf0 >transcript:BL86116_cuf0-protein ID=transcript:BL86116_cuf0-protein|Name=transcript:BL86116_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=349bp
AAILTWIGSALVVIDLTVVSTIASFTVTGVRVDSVSTLAAILTWVGSALV
VIDLTVVSTEASCTVTGVRVDSVSTLAAIMTWIGSTFVVIELTVVSTEAS
CTVAGVRVDPVSTLAAILTWIGSALVVIDLTVVSTVASCTVTGVRVDSVT
TLAAILTWVGSALVVIDLTVVSTVASCTDTGVRVDPISTIASILTWIGCA
LIDVDVTVVSTIASCTVTGVRVDPVTTLASILTWIGSALIDVDVTVVSTV
ASFTVTGVRVDSVSTLASILTWIGSALIDVDVTVVSTVASFTVTGVRVDP
VSTLASILTWIGCALIDVDVTVVSTKASCTVTGVRVDSVLTLAAILTWN Run BLAST on NCBI mRNA from alignment at Sc0000351:190787..192171+ Legend: CDSpolypeptideexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL86116_cuf0 ID=transcript:BL86116_cuf0|Name=transcript:BL86116_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1385bp|location=Sequence derived from alignment at Sc0000351:190787..192171+ (Branchiostoma lanceolatum)
GCCGCCATTTTGACATGGATTGGAAGCGCACTCGTTGTTATTGATCTCAC
AGTTGTCTCCACTATAGCCAGCTTCACAGTTACAGGTGTAAGAGTTGACT
CCGTCTCGACATTGGCCGCCATTTTGACATGGGTTGGAAGCGCACTCGTT
GTTATTGACCTCACAGTTGTCTCCACTGAAGCCAGCTGCACAGTTACAGG
TGTAAGAGTTGACTCCGTCTCGACATTGGCCGCCATTATGACATGGATTG
GAAGCACATTCGTTGTCATTGAGCTCACAGTTGTCTCCACTGAAGCCAGC
TGCACAGTCGCAGGTGTAAGAGTTGACCCCGTCTCGACATTGGCCGCCAT
TTTGACATGGATTGGAAGCGCACTCGTTGTTATTGATCTCACAGTTGTCT
CCACTGTAGCCAGCTGCACAGTTACAGGTGTAAGAGTTGATTCCGTCACG
ACATTGGCCGCCATTTTGACATGGGTTGGAAGCGCACTCGTTGTTATTGA
CCTCACAGTTGTCTCCACTGTAGCCAGCTGCACAGACACAGGTGTAAGAG
TTGACCCCATCTCGACAATTGCCTCCATTTTGACATGGATTGGATGCGCA
CTCATTGATGTTGACGTCACAGTTGTCTCCACTATAGCCAGCTGCACAGT
TACAGGTGTAAGAGTTGACCCCGTCACGACATTGGCCTCCATTTTGACAT
GGATTGGAAGCGCACTCATTGATGTTGACGTCACAGTTGTCTCCACTGTA
GCCAGCTTCACAGTTACAGGTGTAAGAGTTGACTCCGTCTCGACATTGGC
CTCCATTTTGACATGGATTGGAAGCGCACTCATTGATGTTGACGTCACAG
TTGTCTCCACTGTAGCCAGCTTCACAGTTACAGGTGTAAGAGTTGACCCC
GTCTCGACATTGGCCTCCATTTTGACATGGATTGGATGCGCACTCATTGA
TGTTGACGTCACAGTTGTCTCCACTAAAGCCAGCTGCACAGTTACAGGTG
TAAGAGTTGACTCCGTCTTGACATTGGCCGCCATTTTGACATGGAATTGA
AGCACATTCGTTGTCATTGAGCTCACAGTTGTCTCCACTGAAGCCAGCTG
CACAGTCGCAGGTGTACGAGTTGACCCCGTCTTGACATTGGCCGCCATTT
TGACATGGATTTGAAGCACATTCGTTGTCATTGAGCTCACAGTTGTCTCC
ACTAAAGCCAGCTGCACAATTACAGGTGTAAGAGTTGACTCCGTCTCGAC
ACTGGCCGCCGTTTTGACATGGGTTGGAAGCGCACTCGTTGTTATTGACC
TCACAGTTGTCTCCACTGAAGCCAGCTGCACAGTCGCAGGTGTAAGAGTT
GACCCCGTCTCGACATTGGCCGCCATTTTGACATG Coding sequence (CDS) from alignment at Sc0000351:190787..192171+ >transcript:BL86116_cuf0 ID=transcript:BL86116_cuf0|Name=transcript:BL86116_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1050bp|location=Sequence derived from alignment at Sc0000351:190787..192171+ (Branchiostoma lanceolatum)
GCCGCCATTTTGACATGGATTGGAAGCGCACTCGTTGTTATTGATCTCAC
AGTTGTCTCCACTATAGCCAGCTTCACAGTTACAGGTGTAAGAGTTGACT
CCGTCTCGACATTGGCCGCCATTTTGACATGGGTTGGAAGCGCACTCGTT
GTTATTGACCTCACAGTTGTCTCCACTGAAGCCAGCTGCACAGTTACAGG
TGTAAGAGTTGACTCCGTCTCGACATTGGCCGCCATTATGACATGGATTG
GAAGCACATTCGTTGTCATTGAGCTCACAGTTGTCTCCACTGAAGCCAGC
TGCACAGTCGCAGGTGTAAGAGTTGACCCCGTCTCGACATTGGCCGCCAT
TTTGACATGGATTGGAAGCGCACTCGTTGTTATTGATCTCACAGTTGTCT
CCACTGTAGCCAGCTGCACAGTTACAGGTGTAAGAGTTGATTCCGTCACG
ACATTGGCCGCCATTTTGACATGGGTTGGAAGCGCACTCGTTGTTATTGA
CCTCACAGTTGTCTCCACTGTAGCCAGCTGCACAGACACAGGTGTAAGAG
TTGACCCCATCTCGACAATTGCCTCCATTTTGACATGGATTGGATGCGCA
CTCATTGATGTTGACGTCACAGTTGTCTCCACTATAGCCAGCTGCACAGT
TACAGGTGTAAGAGTTGACCCCGTCACGACATTGGCCTCCATTTTGACAT
GGATTGGAAGCGCACTCATTGATGTTGACGTCACAGTTGTCTCCACTGTA
GCCAGCTTCACAGTTACAGGTGTAAGAGTTGACTCCGTCTCGACATTGGC
CTCCATTTTGACATGGATTGGAAGCGCACTCATTGATGTTGACGTCACAG
TTGTCTCCACTGTAGCCAGCTTCACAGTTACAGGTGTAAGAGTTGACCCC
GTCTCGACATTGGCCTCCATTTTGACATGGATTGGATGCGCACTCATTGA
TGTTGACGTCACAGTTGTCTCCACTAAAGCCAGCTGCACAGTTACAGGTG
TAAGAGTTGACTCCGTCTTGACATTGGCCGCCATTTTGACATGGAATTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000351 | genome | Sc0000351:190787..192171 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL86116_cuf0 |
| Biotype | protein_coding |
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