transcript:BL85272_cuf1 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL85272_cuf1
Unique Nametranscript:BL85272_cuf1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL85272_cuf1

>transcript:BL85272_cuf1-protein ID=transcript:BL85272_cuf1-protein|Name=transcript:BL85272_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=1071bp
TCSLVVGSKMSWQCRICLAFFALTLPILLTHMRARHGTDPQFYVRCTLDD
CTKSFNKFNSFYKHVKRNHRHLYVSDTAGHSSDESDPGLDLTGQDQLNVS
MEGDSLSALDSSDESDPGLDLTGQDQLNVSMEGDSLSALDSSDESDPGLD
LTGQDQLNVSMEGDSLSALDSSDESDPGLDLTGQDQLNVSMEGDSLSALD
SSDESDPGLDLTGQDQLNVSMEGDSLSALDSSDESDPGLDLTGQDQLNVS
MEGDSHSVLDSSDESDPGLDMAGEDQLNVSMEGDSHSVLDSSDESDPGLD
MAGQDQLNVNMEGDSLSVSSDESEIDLDPDRRKREAARFICDLKERNVLT
QAAVDDIVKATDSFVGGTIHQLKKKVQRRLIEHGHDPDITDDIFDDDMNP
FRGLLTAYLRDKAIKAHLPVVESKEIVLGRRLAWRRRDNRQEEVIQPVTF
QYVPIIQSIEQLLNGKGIYEMVSNGPMFSQDGYYRDICDGRLFQTHPVFS
EDNNALQIILYYDDVEIDNPIGSYAAKHKVGMFYYSLGNIDLTYRSKLEA
IRLVAIVDTNNIKGFGFEPILNDLVEDLRTLSVGYPFNINGGEVMLRGAV
IAVTADTNACLALAGFKEGVGFANQKCRHCECTIDNMQNNFHETNFVLHT
HQKHLARLNEIDRATIGRIREALKTTYGLNRRSILLDIPYFDVSQMLPND
IMHVMLEGVIPFECKEILRRMIFIDNIFTLKELNIKIRTFKFGQTERKDR
PGPIPESVFRQDNAKLKMTADQTWTFIRHLSIILSSLDVDPENEFMVFLN
QLCEITSLVFSSITSNENIIYLRGLISDHLKAFKRLFPDKNILPKHHYLI
HLPSSMILFGPLIRVWCMRFEGKHAYFKTLARKQNHVNISKSLAQRSLRK
EASESIQPNHPILASKRKFGPCKPLSREDANLAKERMLILLGIEVDGPIY
ATNWAQLSGTMYTKNHDGIVAFGTCEYNNFLPEFGEIKHIWIVGGERVFL
ALNVLQTEGYVETYQGYEVSKPDMATGLVVVDSTNLLDHNMYYKYRIHDK
YIVPLKYDLSSAIDARNGRNE
Run BLAST on NCBI

mRNA from alignment at Sc0000299:44139..54850-

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL85272_cuf1 ID=transcript:BL85272_cuf1|Name=transcript:BL85272_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=10712bp|location=Sequence derived from alignment at Sc0000299:44139..54850- (Branchiostoma lanceolatum)
CACTTGTTCACTTGTTGTTGGCAGCAAGATGTCTTGGCAGTGCCGTATCT GCCTAGCGTTTTTTGCGTTGACTCTACCGATACTGCTCACGCATATGAGA GCACGTCATGGAACAGATCCACAATTTTACGTGCGATGTACACTTGACGA CTGCACAAAGTCCTTCAACAAGTTCAACTCATTCTACAAGCATGTGAAGA GAAATCATCGTCATCTTTATGTATCTGACACCGCCGGGCACTCTTCCGAT GAAAGTGACCCAGGACTAGACTTGACTGGGCAAGATCAGCTTAATGTCAG TATGGAAGGTGACAGTCTCTCAGCCTTAGACTCTTCCGATGAAAGTGACC CAGGACTAGACTTGACTGGGCAAGATCAGCTTAATGTCAGTATGGAAGGT GACAGTCTCTCAGCCTTAGACTCTTCCGATGAAAGTGACCCAGGACTAGA CTTGACTGGGCAAGATCAGCTTAATGTCAGTATGGAAGGTGACAGTCTCT CAGCCTTAGACTCTTCCGATGAAAGTGACCCAGGACTAGACTTGACTGGG CAAGATCAGCTTAATGTCAGTATGGAAGGTGACAGTCTCTCAGCCTTAGA CTCTTCCGATGAAAGTGACCCAGGACTAGACTTGACTGGGCAAGATCAGC TTAATGTCAGTATGGAAGGTGACAGTCTCTCAGCCTTAGACTCTTCCGAT GAAAGTGACCCAGGACTAGACTTGACTGGGCAAGATCAGCTTAATGTCAG TATGGAAGGTGACAGTCACTCAGTCTTAGACTCTTCCGATGAAAGTGACC CAGGACTAGACATGGCTGGGGAAGATCAGCTTAACGTCAGTATGGAAGGT GACAGTCACTCAGTCTTAGACTCTTCCGATGAAAGTGACCCAGGACTAGA CATGGCTGGGCAAGATCAGCTTAACGTCAATATGGAAGGGGACAGTCTCT CAGTCTCTTCCGATGAAAGCGAAATTGACCTCGACCCAGACAGGCGCAAA CGCGAGGCTGCCAGGTTTATATGTGACCTCAAGGAACGGAACGTCTTGAC ACAGGTAAGACTAATTTTCTTTATTTTACAGCACATTTAATTTTGCTATG ATTTTTAACAAAAATATCTGTGATCCAAGTTTCTTGCCCGCAGACTTACG ATTTCTTTCAAATTGGTTTTTAGGCTGCGGTGGACGACATAGTGAAGGCA ACGGATTCTTTTGTGGGAGGAACTATCCATCAACTTAAGAAAAAAGTGCA GAGACGTCTCATCGAGCACGGTCACGATCCAGACATAACAGACGACATTT TTGATGATGATATGAATCCTTTTCGTGGACTTCTTACGGCTTATCTCCGA GATAAAGCCATAAAGGCCCATCTACCAGTTGTGGTAAGTTTCTTTCTCAA TTTTTTGACAACTTCTCTGTTCCCGTACTAACATAGAGATGTGTACCTAA ACGCTGAACAGATTCCGGACGTTTAGGTTCAGGTCCGGACTTGCAAAAAG CGCGGCCACCACTTTTTGCCTACTCTAGTACCCTCCTGAGAGACAACTCG GCCCCTGGAACAACTCGACCCCTAGCCATTCAGGACAACTCGGCACCTAT TACTCATGTGCATGATAAGTGTATTTGGGGCTCAAAGAATGACAATTCTA CCAATCTGACAGGTTGATAAGTGGAAGAAGAATTTTAAGAAACAAAAATC AGTCCCTACAGAAGCATTTTTGTATTTCCATAAGTCTCAAACGTTACCAG AACGTCAAAAACATGTTGCGGGCCGGCGCGGCGACGCCATTTGTTTGTTA TTTTCGACGCTCTTTCACGAACTCCCTACGCTTATGTTCTGTTATGAAAG TGGTTATAACTTATTACCGATGAAACTAAATGTATAGCAGTTCATTATGT TTTGTTGCACATAGATTTTAACAGTTTGTAGGTTTTCAAAACGCGTCGAG ACACTTCCTTATTCATATTCAAACTATCAAAGCGTTCCGGGGAAATGACC TGCAGAGTTTCACAATTTTCTATTTTTTTTTAGACGAAATGTTTGGCAGT TAAACATGTTTTATTCCGCACATAGATTTTAAAATGTCCCTGTTCTGTTT GCTGATCTATGTCAGTTTTAGGCTCGGTGCCGAGTTGTCCTGAGCTAGGG GCCGAGTTGTCCCGAATGGCTAGGGGCCGAGTTGTCCCAGGGGCCGAGAT GTCCTGATAGTGATACTGTAAGAAAATTATGGATTTTTCCTCGGTAGGTT GATATTTTCCTAACAGTTGGCGGGGTGCTCGCGCAGTTGTCTTGAGCTTG TGCCATGCTCGTTTTTGTCGTACCGCCCTAGCGATTTTTGTCGATTTATT ATTAAAATATAATTGATGTATTGACTCTTGTGGAAGGACGTATACAGTAT AAATTTTGCTTATTATATAGGACCGTTTAGAAAGTTAAGGATCAAGGAGG TTATATAAGTGTTCTCGCCAGGCCTTTTGAGCATAGCGGGCCGCTACGCT GCGGGCCTACAAACCGACGCTATAAATCACCCGCTATGCTGTTTTTTGAC CCAGCGTAGCGGCGAAAAAAGACAAAAATACCGTAGTAAAAATGCAAAGG CACGCGCCTCCGCTGTTTCACAGGAAGCCATAATCAGCTATCAGCTCCAA GGGAGGTGCCAATTACTAAATTAGCACGCCGCCCTACCGCTCCGATCTTG TCTCGCCGCCCCTTCCACCCGGGAAAATCCCTTAGCGGCTCGTGTGCCGC TGGCAGAATCGCGCGAAAACGTAAACAATAGCCGAGTAGGTCTCCATGTG CACAATCTGCGGGGCGGTTCCCGACTATCAGAACAGCCGTAAATGTATCA GATTCCCGGGGAATCTCCTTATTTGGAAGTTAACAGTCCGCAGTTGACCA ATGTTGTTCTTTGTAAAAGATTCCTTTCTCTGTCAGCGCGGGAATAGAAT TAATTCTTAACTGTATTTTTGGCAAATTTCTAGAGCAAGGTTACGTCATT TTCCCATCCATAAGAGCGAATTAATGCACAGAAAATTCATTTTTACAAAG AGAGGAAGATAAAGTTTCAACTTATTTAGAAGCTTCGCCATGATTGGACA ATTTGGCTACTGCTTATTTCTGGCACCGCCCACAAACCGCCGACTTTCCT TTTAGCAGACTTTCTGCCGCCGACGTCGCCATGGTCGCGACTGTCATCAA AGGCTGCCGACTGTCAATCAGCCGCAACTTTGTGGGAAAACGCGCGAGTT GGATCTCCGTGTGCTAGTCAACTTTCCCACAGCGATGCTTGTACAAAGTT TTTATTAGACGGAAGTTCCACGTTATCTGTAACTTAAGATGCAGAACAGC GGTTTCGGCTTCCTGGAACGGGCTGGCGGCGTATGTACTTGGGGGAGGGT GACGCGATTTCTTAGACGGGCCAAGGTTGTCTAAATGCCGCGGTATTAAG ATTTTCGCCGCCGACCGCCGAGGGAAGATCGCCTCGGCAGCGATTTTTCT GGAAACATGCCGGCGTTGAAGCGTACTGTACCAGGAATATCGCTTCCTAT TTCGCACCGAAGAAAACTTATGAAAGCAACGATTGTCGCGCTTCGACTTA GGACAGCCGGATACAGCCAAAAAAAGGAAAACTGGTTTCGACAATTGATA TTGTTGAGTTGCTAAATAAACTATTGATATTGTTGTTTCTGAGTTTCAAG TTGTCTTTCACCAGAAATATTGTATGTCAAGGTCCTGTGGAGAAGTTGAT TGACTGCCACGATTGTCATAAACATGACCCTCAAAACTGAAAATAAAGCC TTCTCAATACCCTAAAATGCAAGAGCTTCCGGGGGGCTTCGCCCCCCTGG GTCCCCCCAACGGGGCTCTGCCCCTGGACCCCGTCGGGGCTTAGGCAGCC CCCGAACCCCTGCCCCGACGCTGTGAAAAAAACCTGGCGAGAACACCAGA TACTTCAAGATCGGATCTTCGTGCATCAAACCAATGAAGTGGTCTGATGC ACGAAGATCCCTTTTTCCTGTGGCTTTCAAAATGGCCGACCTCGGGGCCA GGGACCGAAAAACCCTAGAAAAAATCGTAAAAAAAGGGGATCTTCGTGCA TCAGATTCGGAATGTTTGTTATCGCTTATGTAGCTTTTCGGGAGTAAGAC ACAATATCATATACGAGCTTATAAATACAATGTACGTCTTTCCACCGTTT CGGCTACACAGTCACCATTTATTGTAGGAAGATTACCGGCAACAAAACAA CAATAAAAGCAAATTACAGAATATGTTCCATACCATACCCTCAAATCAAA ACTTATACAACAGCGAGCACTGCAGCCGGTCATAAGTGTGTTGCTCTAAT ATCTCTACAGCATCAACCAAACACTTGGGAGTTATGGAATAGAACATATT CTGGTAGTATTCTGACGATAAATGGAGAGTCTTCTCCCCAGTATACCTAT TTCCTCATATTTTTTAAAATGGTCCATAAAATTGCTAAAATTAAAATCAC TCAACAGAAAGTTGTCATCCCCAGGTGCTAGGTTGAAAATAACTGTGACA AGAAAGTGCCATTTTGAAAATAACCAAAATAATGAAGGGAAGACGCCAGA GCCCGCATGGAATTCATGTTATATGACAAAAAAATATACTGTAAATCATA AATGCAGAAATGTTCGCAGTGGTTTTATGTTCACACGTGTGAGGCCACGT TGCAGGAACGCACGCGTTAGATGTAGTTTTTGAATTGTTAATTTCTACAG TACGTCCATTATTGCATGGGGATTGGGGAGGGAGTGAAATATGTACGCAA GCAAGATCAAGCAAATGTTGGCCTTTAGCTTTAGGTACAATATGCTGTCT TTCAAAGAAAGAAAAAATATGAGTTACCTTTTTAGTATAGGTAATACATC TTTAGCATTGACTTATTTAGCCATAATATTTTAACTCATTATCCATTTAT TTGTTTCCCGTTTGTGCATGCAGGAATCAAAGGAAATTGTCCTTGGACGA AGGCTAGCTTGGCGAAGAAGAGACAACAGACAGGAAGAGGTCATCCAACC AGTAACGTTCCAGTATGTACCAATAATCCAGAGTATAGAGCAGCTGCTTA ATGGTAAAGGTATATATGAAATGGTGTCTAATGGACCAATGTTCTCGCAG GATGGATACTACCGAGATATTTGCGATGGCAGGTTATTTCAAACTCACCC AGTATTTTCTGAAGATAACAACGCTTTGCAAATTATTCTTTACTATGACG ATGTAGAAATAGATAATCCAATTGGTTCATATGCAGCCAAACATAAGGTT GGAATGTTTTATTATTCCCTTGGCAACATCGACTTGACGTATCGGTCCAA GCTAGAGGCGATTAGGCTTGTTGCAATTGTTGACACTAACAACATAAAAG GTTTCGGCTTTGAACCAATTTTAAACGACCTTGTGGAGGATTTAAGAACA TTGTCTGTAGGATATCCTTTTAATATTAATGGTGGAGAGGTTATGCTAAG AGGTGCTGTTATTGCCGTAACTGCAGACACAAATGCCTGTCTGGCCTTGG CTGGTTTTAAAGAAGGTGTTGGATTTGCCAACCAGAAGTGCCGTCATTGT GAATGCACAATTGATAACATGCAAAATAACTTTCACGAGACTAACTTTGT ACTTCACACACATCAAAAACATTTGGCTCGCCTCAATGAAATTGACAGGG CAACAATAGGCCGTATTAGAGAGGCATTGAAAACTACATATGGTTTAAAC AGAAGAAGCATTCTTCTCGATATCCCCTATTTTGATGTAAGTCAAATGTT GCCGAATGATATTATGCATGTGATGTTGGAAGGAGTCATTCCATTTGAAT GCAAAGAAATTCTTAGAAGAATGATATTTATTGATAACATTTTTACCTTG AAGGAGCTTAACATCAAAATCAGAACATTTAAGTTTGGTCAGACAGAAAG AAAGGACAGGCCGGGTCCTATTCCAGAATCTGTTTTCCGTCAAGACAACG CAAAATTGAAAATGACAGCCGACCAGACATGGACCTTCATTCGGCATTTA TCTATCATCTTGTCCTCCCTAGATGTTGACCCTGAAAATGAGTTCATGGT ATTCCTGAACCAACTATGCGAAATAACATCACTTGTGTTTTCCAGTATCA CATCAAATGAGAACATTATATATCTCCGTGGTTTGATTTCAGATCATCTT AAGGCATTCAAAAGATTATTCCCTGACAAGAACATTCTCCCGAAACACCA TTATCTTATCCATTTGCCTTCAAGTATGATTCTTTTTGGACCGTTGATTC GTGTATGGTGCATGAGATTTGAAGGAAAGCATGCTTATTTCAAAACACTG GCTAGAAAACAAAATCATGTTAACATTTCAAAGTCCTTGGCCCAGAGAAG CTTACGTAAAGAGGCAAGTGAATCAATTCAGCCTAATCATCCTATTTTGG CATCAAAACGTAAATTCGGACCCTGCAAGCCGCTTTCAAGAGAAGATGCA AATCTTGCTAAAGAGAGAATGCTCATATTGTTAGGTATAGAAGTAGATGG CCCAATTTACGCCACAAATTGGGCACAACTGTCAGGGACAATGTACACCA AAAATCACGATGGGATTGTTGCCTTTGGTACCTGTGAATATAACAATTTT TTACCTGAATTTGGAGAAATTAAACACATTTGGATTGTAGGGGGGGAGAG GGTATTTCTGGCCTTGAACGTTTTGCAGACAGAAGGATATGTTGAGACAT ATCAGGGTTATGAAGTGTCAAAGCCTGACATGGCAACAGGACTGGTAGTT GTTGATAGTACTAATCTCCTAGACCATAACATGTACTACAAATATAGGAT CCATGACAAATATATTGTGCCATTAAAGTATGATCTATCGTCTGCAATTG ATGCTAGGAATGGTCGGAATGAGTAAATCAAACACCTCAATGTTCTTATT TATAGGCCGATTGATAGCTGAAAACAATTTGATTTATGATGTTACTACCA TTTGTTATTAGTACATGTATCTTATTAGCATTCACTTAGCATATCTGTCT GCTAGGATATTAATAGCACTTCCACTTGTGTTTCTCTAGCTTAGGTTAGT CTAGTCATATGTCTAGTCATATGTCTCGGTACACAATATTGTATAGGTAG AGAATTGTGGTTTTGACCAGATTTTTCTAGAGATGTGATTTTTGTTAAAA TTACAGATTAGATGTGTTACTCATGCAATCTATAAAATATAACGTAATAT GCATTACTACTGACTTTTCTACCTCAACCAATTTTATAACATCCTAATAA AGGCAGTTGTATTTACATAGCCCTAGAGGTTTCTGATACATAGACAAATG TAATATCAGTTGCTTTAATATTGGTGATAATTGTTAACTAAGCTATATGA GAATATTGTACACTTTATCCCAGTGCGGTAGTGTAGAAATTATTCAATTC ATGTTTGACGTTGAACACAGTATACAGTATATTTACTTTGTAGATATCTA GATAACACAATGTCAAAAATATCTTTGTGGCTTAAGTATGCACATGACCT GATGTAAATGCTGTGTGAAAGAGGAAAATAGCAGAGGTTTATATGCCATT GTGCTCAGGTCTTGTAGCTTTTTCATGTTCTTGTAATAAAGTAGACATGC ATATGCATTGTATAACATTCATTAATTTTCATCCACCTGGGTAAATATAT TCGCCTCTTTGAAAAACAGTGATGATGCATGTAATTACATATTATTAGAT TATTAACTGAAGCATAGTTTTTACAGTTATGTATACATAGGTATATACCT TTTGTTGTTATATCAGATACAAATGCATACCTGTGAATGGTTGGTGTGTT TTTGTTAACAGTATACACTGGAGACAGATTATGGATGGATATTAATCACC AGGCAAAACTTGAATGTGTTAGAACATCATCAAATCTGCATATGTGTGAA TTTTATGTTATGTTCTTGTATTGTACAGGACATAAGATGGAATGTCCAAC ATTTGCAATTGTAGGAACAATAGAACACAAAATCAATTATTGAAGGATTT TGCCTCACAAATGTAATAAATGCTTTTAAATCTACATATCGTTTTCGTGT TTGCTTAAACATTAAATGTTTACTATTCATGAGCATTAGATAATGTTCCC AGACTCCCTTTTCTCTCTTATTCGTTTTGCTTACATGACATGCTATAGAA ATCAGCATCAGTATAATACGAGATACAAGGTGATAACTTTATTGGAAGTC GCAGTGTTGTCACTGAATTAAAACCAATGTACATTCTTAAAAACCATTCA TGATAGGCGGCAAAACATAATTGTCATGTTTAATATAAATGTTAAACCGA GTTATTAGTAAAAGATTGAAATATAGAAATTTTGAAGAAAATGAGTAATT GTGTTCTATTTCAAATGTAGATGAATATAAATCTAACTTAAGCATGCACA GAAGTCATTTTTAACTTAAAGACATTAATTCAGATACCTAAATTTGAAGA CATTTATGAAGTCTTGAAGTTATCTAAAATCGGTCATTGCTAAATCATAA GATCAAAGTCGGGCAGCTGTGGTTTTATATAGCCGATCAACATGAAAAGA AATAAAATCAATCTTAACAACAGGTCTACGCACAATTCAAATTTCTTTGA AAATACTAAATGCGATAAGAGTGCACTGACATGACTGAAGAAATGTCATT GCATAATCCCATTACATCCTACAAAAGCGCACCATATGAGCATAACATGA ACTGCAGGGTGAAGTTTCAGATAAGGACAAATCATGAAACAAAACAAAGC ACAAGAATATCCATAACATTAACGTAAAGTTATTCTAGTCTTTACTTGAA GGTTGTCTCGTGGTTTGAATATTTTTATTTTCTTGTGTTGTAAGCCGTAT ATCTCAAGAAAGGAAAGAAGCAAATTCTTGCATTATCTAAAATCTAAGAG ATATATATACCAAGAAGTCATTTTCTTCAAGTTTCTTGACACTACGAACA AGAACATTTAAGAAATATATTCTAGTCTTTACTTGAAGGTTGTCTCGTGG TTTGAATATTTTTATTTTCTTGTGTTGTAAGCCGTATATCTCAAGAAAGG AAAGACGCAAATTCTTGCATTATCTAAAATCTAAGATATACCAAGAAGTA ATTTTCTTAAAGTTTCTTGACACTACGAACAAGAACATTCAAGAAATATA TTCTAGTCTTTACTTGAAGGTTGTCTCGTAGTTTGAATATCTTAATTTTC TTGGTTTTCTATGTAATCTATTCCAAGAAAGGCAAGAAGCAAATTCTTGT ATTTTCTCAAATCTATCAAGAAAAAACAAGAATTCCCTTTCTTAAAGTTT CTTGACACTACGAACAAGAACATTCAAGAAATATATTCTAGTCTTTACTT GAAGGTTGTCTCATAGTTTGAATATCTTAATTTTCTTGGTTTTCTATGTA GTTTATTCCAAGAAAGGCAAGAAGCAAATTCTTGTATTTTCTCAAATCTA TCAAGAAAAAACAAGAATTCCCTTTCTTAAAGTTTCTTGACACTACGAAT AAGAACATTCAAGAAATGTATTCTAGTCTTTACTTGAAGGTTGTCTCATA GTTTGAATATCTTAATTTTCTTGGTTTTCTATGTAGTTTATTCCAAGAAA GGCAAGAAGCAAATTCTTGTATTTTCTCAAATCTATCAAGAAAAAACAAG AATTCCCTTTCTTAAAGTTTCTTGACACTACGAATAAGAACATTCAAGAA ATGTATTCTAGTCTTTACTTGAAGGTTGTCTCATAGTTTGAATATCTTAA TTTTCTTGGTTTTCCATGTTGTTTATTCCAAGAAAGGCAAGAAGCAAATT CTTGTATTTTCTCAAATCTATCAAGAAAAAAAAAGAATTCCCTTTCTTAA AGTTTCTTGACACTACGAATAAGAACATTCAAGAAATGTATTCTAGTCTT TACTTGAAGGTTGTCTCATAGTTTGAATATCTTAATTTTCTTGGTTTTCT ATGTAGTTTATTCCAAGAAAGGCAAGAAGCAAATTCTTGTATTTTCTCAA ATCTATCAAGAAAAAACAAGAATTCCCTTTCTTAAAGTTTCTTGACACTA CGAACAAGAACATTCAAGAAATGTATTCTAGTCTTTACTTGAAGGTTGTC TCATAGTTTGAATATCTTAATTTTCTTGTTTTTCTATGTAGCATATTTCA AGAAAGGCAAGAAGCAAATTCTTGTATTTTCTCAAATCTATCAAGAAAAA ACAAGATTTCCCTTTCTCAACATTTCTTAATACTAAAACAAGACCATTCT AGGATGTATTTCTAGTCATAACTTATTTTAATGTCCTGATTTACTTGTTT TTCCATTTTCTTACTTACCAGCAGTAATGTAAGAAAGGTAAGAGAAAAAT TCTTAATATTTTCTTAAACATGACAAGGAAAAAAAACTTGATAGACAAGA AAATCAAGTAATTTACACTTGAATTTCTTGATTTTCTTGAGAAAGTCAAG AAATTTACACTTGAATTCCTTAATTGAAAATCTTCTTGAGAAAGTGTTTC CTAAAAAGAGAAAATTAAGAAAGTGTTTCTTGTTATGAGAACTTCCACGA AAAAAATCTGTTATTTTTTTCTCTTATTCTTCTTGATATTCTTAATATAA GAAACTTTGTCCACGAGTTAAGAAAAACTAAGAAACCTAGAAAAACAAGA AAAAAAATTTTT

Coding sequence (CDS) from alignment at Sc0000299:44139..54850-

>transcript:BL85272_cuf1 ID=transcript:BL85272_cuf1|Name=transcript:BL85272_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=9648bp|location=Sequence derived from alignment at Sc0000299:44139..54850- (Branchiostoma lanceolatum)
ACTTGTTCACTTGTTGTTGGCAGCAAGATGTCTTGGCAGTGCCGTATCTG
CCTAGCGTTTTTTGCGTTGACTCTACCGATACTGCTCACGCATATGAGAG
CACGTCATGGAACAGATCCACAATTTTACGTGCGATGTACACTTGACGAC
TGCACAAAGTCCTTCAACAAGTTCAACTCATTCTACAAGCATGTGAAGAG
AAATCATCGTCATCTTTATGTATCTGACACCGCCGGGCACTCTTCCGATG
AAAGTGACCCAGGACTAGACTTGACTGGGCAAGATCAGCTTAATGTCAGT
ATGGAAGGTGACAGTCTCTCAGCCTTAGACTCTTCCGATGAAAGTGACCC
AGGACTAGACTTGACTGGGCAAGATCAGCTTAATGTCAGTATGGAAGGTG
ACAGTCTCTCAGCCTTAGACTCTTCCGATGAAAGTGACCCAGGACTAGAC
TTGACTGGGCAAGATCAGCTTAATGTCAGTATGGAAGGTGACAGTCTCTC
AGCCTTAGACTCTTCCGATGAAAGTGACCCAGGACTAGACTTGACTGGGC
AAGATCAGCTTAATGTCAGTATGGAAGGTGACAGTCTCTCAGCCTTAGAC
TCTTCCGATGAAAGTGACCCAGGACTAGACTTGACTGGGCAAGATCAGCT
TAATGTCAGTATGGAAGGTGACAGTCTCTCAGCCTTAGACTCTTCCGATG
AAAGTGACCCAGGACTAGACTTGACTGGGCAAGATCAGCTTAATGTCAGT
ATGGAAGGTGACAGTCACTCAGTCTTAGACTCTTCCGATGAAAGTGACCC
AGGACTAGACATGGCTGGGGAAGATCAGCTTAACGTCAGTATGGAAGGTG
ACAGTCACTCAGTCTTAGACTCTTCCGATGAAAGTGACCCAGGACTAGAC
ATGGCTGGGCAAGATCAGCTTAACGTCAATATGGAAGGGGACAGTCTCTC
AGTCTCTTCCGATGAAAGCGAAATTGACCTCGACCCAGACAGGCGCAAAC
GCGAGGCTGCCAGGTTTATATGTGACCTCAAGGAACGGAACGTCTTGACA
CAGGCTGCGGTGGACGACATAGTGAAGGCAACGGATTCTTTTGTGGGAGG
AACTATCCATCAACTTAAGAAAAAAGTGCAGAGACGTCTCATCGAGCACG
GTCACGATCCAGACATAACAGACGACATTTTTGATGATGATATGAATCCT
TTTCGTGGACTTCTTACGGCTTATCTCCGAGATAAAGCCATAAAGGCCCA
TCTACCAGTTGTGGAATCAAAGGAAATTGTCCTTGGACGAAGGCTAGCTT
GGCGAAGAAGAGACAACAGACAGGAAGAGGTCATCCAACCAGTAACGTTC
CAGTATGTACCAATAATCCAGAGTATAGAGCAGCTGCTTAATGGTAAAGG
TATATATGAAATGGTGTCTAATGGACCAATGTTCTCGCAGGATGGATACT
ACCGAGATATTTGCGATGGCAGGTTATTTCAAACTCACCCAGTATTTTCT
GAAGATAACAACGCTTTGCAAATTATTCTTTACTATGACGATGTAGAAAT
AGATAATCCAATTGGTTCATATGCAGCCAAACATAAGGTTGGAATGTTTT
ATTATTCCCTTGGCAACATCGACTTGACGTATCGGTCCAAGCTAGAGGCG
ATTAGGCTTGTTGCAATTGTTGACACTAACAACATAAAAGGTTTCGGCTT
TGAACCAATTTTAAACGACCTTGTGGAGGATTTAAGAACATTGTCTGTAG
GATATCCTTTTAATATTAATGGTGGAGAGGTTATGCTAAGAGGTGCTGTT
ATTGCCGTAACTGCAGACACAAATGCCTGTCTGGCCTTGGCTGGTTTTAA
AGAAGGTGTTGGATTTGCCAACCAGAAGTGCCGTCATTGTGAATGCACAA
TTGATAACATGCAAAATAACTTTCACGAGACTAACTTTGTACTTCACACA
CATCAAAAACATTTGGCTCGCCTCAATGAAATTGACAGGGCAACAATAGG
CCGTATTAGAGAGGCATTGAAAACTACATATGGTTTAAACAGAAGAAGCA
TTCTTCTCGATATCCCCTATTTTGATGTAAGTCAAATGTTGCCGAATGAT
ATTATGCATGTGATGTTGGAAGGAGTCATTCCATTTGAATGCAAAGAAAT
TCTTAGAAGAATGATATTTATTGATAACATTTTTACCTTGAAGGAGCTTA
ACATCAAAATCAGAACATTTAAGTTTGGTCAGACAGAAAGAAAGGACAGG
CCGGGTCCTATTCCAGAATCTGTTTTCCGTCAAGACAACGCAAAATTGAA
AATGACAGCCGACCAGACATGGACCTTCATTCGGCATTTATCTATCATCT
TGTCCTCCCTAGATGTTGACCCTGAAAATGAGTTCATGGTATTCCTGAAC
CAACTATGCGAAATAACATCACTTGTGTTTTCCAGTATCACATCAAATGA
GAACATTATATATCTCCGTGGTTTGATTTCAGATCATCTTAAGGCATTCA
AAAGATTATTCCCTGACAAGAACATTCTCCCGAAACACCATTATCTTATC
CATTTGCCTTCAAGTATGATTCTTTTTGGACCGTTGATTCGTGTATGGTG
CATGAGATTTGAAGGAAAGCATGCTTATTTCAAAACACTGGCTAGAAAAC
AAAATCATGTTAACATTTCAAAGTCCTTGGCCCAGAGAAGCTTACGTAAA
GAGGCAAGTGAATCAATTCAGCCTAATCATCCTATTTTGGCATCAAAACG
TAAATTCGGACCCTGCAAGCCGCTTTCAAGAGAAGATGCAAATCTTGCTA
AAGAGAGAATGCTCATATTGTTAGGTATAGAAGTAGATGGCCCAATTTAC
GCCACAAATTGGGCACAACTGTCAGGGACAATGTACACCAAAAATCACGA
TGGGATTGTTGCCTTTGGTACCTGTGAATATAACAATTTTTTACCTGAAT
TTGGAGAAATTAAACACATTTGGATTGTAGGGGGGGAGAGGGTATTTCTG
GCCTTGAACGTTTTGCAGACAGAAGGATATGTTGAGACATATCAGGGTTA
TGAAGTGTCAAAGCCTGACATGGCAACAGGACTGGTAGTTGTTGATAGTA
CTAATCTCCTAGACCATAACATGTACTACAAATATAGGATCCATGACAAA
TATATTGTGCCATTAAAGTATGATCTATCGTCTGCAATTGATGCTAGGAA
TGGTCGGAATGAGTAAACTTGTTCACTTGTTGTTGGCAGCAAGATGTCTT
GGCAGTGCCGTATCTGCCTAGCGTTTTTTGCGTTGACTCTACCGATACTG
CTCACGCATATGAGAGCACGTCATGGAACAGATCCACAATTTTACGTGCG
ATGTACACTTGACGACTGCACAAAGTCCTTCAACAAGTTCAACTCATTCT
ACAAGCATGTGAAGAGAAATCATCGTCATCTTTATGTATCTGACACCGCC
GGGCACTCTTCCGATGAAAGTGACCCAGGACTAGACTTGACTGGGCAAGA
TCAGCTTAATGTCAGTATGGAAGGTGACAGTCTCTCAGCCTTAGACTCTT
CCGATGAAAGTGACCCAGGACTAGACTTGACTGGGCAAGATCAGCTTAAT
GTCAGTATGGAAGGTGACAGTCTCTCAGCCTTAGACTCTTCCGATGAAAG
TGACCCAGGACTAGACTTGACTGGGCAAGATCAGCTTAATGTCAGTATGG
AAGGTGACAGTCTCTCAGCCTTAGACTCTTCCGATGAAAGTGACCCAGGA
CTAGACTTGACTGGGCAAGATCAGCTTAATGTCAGTATGGAAGGTGACAG
TCTCTCAGCCTTAGACTCTTCCGATGAAAGTGACCCAGGACTAGACTTGA
CTGGGCAAGATCAGCTTAATGTCAGTATGGAAGGTGACAGTCTCTCAGCC
TTAGACTCTTCCGATGAAAGTGACCCAGGACTAGACTTGACTGGGCAAGA
TCAGCTTAATGTCAGTATGGAAGGTGACAGTCACTCAGTCTTAGACTCTT
CCGATGAAAGTGACCCAGGACTAGACATGGCTGGGGAAGATCAGCTTAAC
GTCAGTATGGAAGGTGACAGTCACTCAGTCTTAGACTCTTCCGATGAAAG
TGACCCAGGACTAGACATGGCTGGGCAAGATCAGCTTAACGTCAATATGG
AAGGGGACAGTCTCTCAGTCTCTTCCGATGAAAGCGAAATTGACCTCGAC
CCAGACAGGCGCAAACGCGAGGCTGCCAGGTTTATATGTGACCTCAAGGA
ACGGAACGTCTTGACACAGGCTGCGGTGGACGACATAGTGAAGGCAACGG
ATTCTTTTGTGGGAGGAACTATCCATCAACTTAAGAAAAAAGTGCAGAGA
CGTCTCATCGAGCACGGTCACGATCCAGACATAACAGACGACATTTTTGA
TGATGATATGAATCCTTTTCGTGGACTTCTTACGGCTTATCTCCGAGATA
AAGCCATAAAGGCCCATCTACCAGTTGTGGAATCAAAGGAAATTGTCCTT
GGACGAAGGCTAGCTTGGCGAAGAAGAGACAACAGACAGGAAGAGGTCAT
CCAACCAGTAACGTTCCAGTATGTACCAATAATCCAGAGTATAGAGCAGC
TGCTTAATGGTAAAGGTATATATGAAATGGTGTCTAATGGACCAATGTTC
TCGCAGGATGGATACTACCGAGATATTTGCGATGGCAGGTTATTTCAAAC
TCACCCAGTATTTTCTGAAGATAACAACGCTTTGCAAATTATTCTTTACT
ATGACGATGTAGAAATAGATAATCCAATTGGTTCATATGCAGCCAAACAT
AAGGTTGGAATGTTTTATTATTCCCTTGGCAACATCGACTTGACGTATCG
GTCCAAGCTAGAGGCGATTAGGCTTGTTGCAATTGTTGACACTAACAACA
TAAAAGGTTTCGGCTTTGAACCAATTTTAAACGACCTTGTGGAGGATTTA
AGAACATTGTCTGTAGGATATCCTTTTAATATTAATGGTGGAGAGGTTAT
GCTAAGAGGTGCTGTTATTGCCGTAACTGCAGACACAAATGCCTGTCTGG
CCTTGGCTGGTTTTAAAGAAGGTGTTGGATTTGCCAACCAGAAGTGCCGT
CATTGTGAATGCACAATTGATAACATGCAAAATAACTTTCACGAGACTAA
CTTTGTACTTCACACACATCAAAAACATTTGGCTCGCCTCAATGAAATTG
ACAGGGCAACAATAGGCCGTATTAGAGAGGCATTGAAAACTACATATGGT
TTAAACAGAAGAAGCATTCTTCTCGATATCCCCTATTTTGATGTAAGTCA
AATGTTGCCGAATGATATTATGCATGTGATGTTGGAAGGAGTCATTCCAT
TTGAATGCAAAGAAATTCTTAGAAGAATGATATTTATTGATAACATTTTT
ACCTTGAAGGAGCTTAACATCAAAATCAGAACATTTAAGTTTGGTCAGAC
AGAAAGAAAGGACAGGCCGGGTCCTATTCCAGAATCTGTTTTCCGTCAAG
ACAACGCAAAATTGAAAATGACAGCCGACCAGACATGGACCTTCATTCGG
CATTTATCTATCATCTTGTCCTCCCTAGATGTTGACCCTGAAAATGAGTT
CATGGTATTCCTGAACCAACTATGCGAAATAACATCACTTGTGTTTTCCA
GTATCACATCAAATGAGAACATTATATATCTCCGTGGTTTGATTTCAGAT
CATCTTAAGGCATTCAAAAGATTATTCCCTGACAAGAACATTCTCCCGAA
ACACCATTATCTTATCCATTTGCCTTCAAGTATGATTCTTTTTGGACCGT
TGATTCGTGTATGGTGCATGAGATTTGAAGGAAAGCATGCTTATTTCAAA
ACACTGGCTAGAAAACAAAATCATGTTAACATTTCAAAGTCCTTGGCCCA
GAGAAGCTTACGTAAAGAGGCAAGTGAATCAATTCAGCCTAATCATCCTA
TTTTGGCATCAAAACGTAAATTCGGACCCTGCAAGCCGCTTTCAAGAGAA
GATGCAAATCTTGCTAAAGAGAGAATGCTCATATTGTTAGGTATAGAAGT
AGATGGCCCAATTTACGCCACAAATTGGGCACAACTGTCAGGGACAATGT
ACACCAAAAATCACGATGGGATTGTTGCCTTTGGTACCTGTGAATATAAC
AATTTTTTACCTGAATTTGGAGAAATTAAACACATTTGGATTGTAGGGGG
GGAGAGGGTATTTCTGGCCTTGAACGTTTTGCAGACAGAAGGATATGTTG
AGACATATCAGGGTTATGAAGTGTCAAAGCCTGACATGGCAACAGGACTG
GTAGTTGTTGATAGTACTAATCTCCTAGACCATAACATGTACTACAAATA
TAGGATCCATGACAAATATATTGTGCCATTAAAGTATGATCTATCGTCTG
CAATTGATGCTAGGAATGGTCGGAATGAGTAAACTTGTTCACTTGTTGTT
GGCAGCAAGATGTCTTGGCAGTGCCGTATCTGCCTAGCGTTTTTTGCGTT
GACTCTACCGATACTGCTCACGCATATGAGAGCACGTCATGGAACAGATC
CACAATTTTACGTGCGATGTACACTTGACGACTGCACAAAGTCCTTCAAC
AAGTTCAACTCATTCTACAAGCATGTGAAGAGAAATCATCGTCATCTTTA
TGTATCTGACACCGCCGGGCACTCTTCCGATGAAAGTGACCCAGGACTAG
ACTTGACTGGGCAAGATCAGCTTAATGTCAGTATGGAAGGTGACAGTCTC
TCAGCCTTAGACTCTTCCGATGAAAGTGACCCAGGACTAGACTTGACTGG
GCAAGATCAGCTTAATGTCAGTATGGAAGGTGACAGTCTCTCAGCCTTAG
ACTCTTCCGATGAAAGTGACCCAGGACTAGACTTGACTGGGCAAGATCAG
CTTAATGTCAGTATGGAAGGTGACAGTCTCTCAGCCTTAGACTCTTCCGA
TGAAAGTGACCCAGGACTAGACTTGACTGGGCAAGATCAGCTTAATGTCA
GTATGGAAGGTGACAGTCTCTCAGCCTTAGACTCTTCCGATGAAAGTGAC
CCAGGACTAGACTTGACTGGGCAAGATCAGCTTAATGTCAGTATGGAAGG
TGACAGTCTCTCAGCCTTAGACTCTTCCGATGAAAGTGACCCAGGACTAG
ACTTGACTGGGCAAGATCAGCTTAATGTCAGTATGGAAGGTGACAGTCAC
TCAGTCTTAGACTCTTCCGATGAAAGTGACCCAGGACTAGACATGGCTGG
GGAAGATCAGCTTAACGTCAGTATGGAAGGTGACAGTCACTCAGTCTTAG
ACTCTTCCGATGAAAGTGACCCAGGACTAGACATGGCTGGGCAAGATCAG
CTTAACGTCAATATGGAAGGGGACAGTCTCTCAGTCTCTTCCGATGAAAG
CGAAATTGACCTCGACCCAGACAGGCGCAAACGCGAGGCTGCCAGGTTTA
TATGTGACCTCAAGGAACGGAACGTCTTGACACAGGCTGCGGTGGACGAC
ATAGTGAAGGCAACGGATTCTTTTGTGGGAGGAACTATCCATCAACTTAA
GAAAAAAGTGCAGAGACGTCTCATCGAGCACGGTCACGATCCAGACATAA
CAGACGACATTTTTGATGATGATATGAATCCTTTTCGTGGACTTCTTACG
GCTTATCTCCGAGATAAAGCCATAAAGGCCCATCTACCAGTTGTGGAATC
AAAGGAAATTGTCCTTGGACGAAGGCTAGCTTGGCGAAGAAGAGACAACA
GACAGGAAGAGGTCATCCAACCAGTAACGTTCCAGTATGTACCAATAATC
CAGAGTATAGAGCAGCTGCTTAATGGTAAAGGTATATATGAAATGGTGTC
TAATGGACCAATGTTCTCGCAGGATGGATACTACCGAGATATTTGCGATG
GCAGGTTATTTCAAACTCACCCAGTATTTTCTGAAGATAACAACGCTTTG
CAAATTATTCTTTACTATGACGATGTAGAAATAGATAATCCAATTGGTTC
ATATGCAGCCAAACATAAGGTTGGAATGTTTTATTATTCCCTTGGCAACA
TCGACTTGACGTATCGGTCCAAGCTAGAGGCGATTAGGCTTGTTGCAATT
GTTGACACTAACAACATAAAAGGTTTCGGCTTTGAACCAATTTTAAACGA
CCTTGTGGAGGATTTAAGAACATTGTCTGTAGGATATCCTTTTAATATTA
ATGGTGGAGAGGTTATGCTAAGAGGTGCTGTTATTGCCGTAACTGCAGAC
ACAAATGCCTGTCTGGCCTTGGCTGGTTTTAAAGAAGGTGTTGGATTTGC
CAACCAGAAGTGCCGTCATTGTGAATGCACAATTGATAACATGCAAAATA
ACTTTCACGAGACTAACTTTGTACTTCACACACATCAAAAACATTTGGCT
CGCCTCAATGAAATTGACAGGGCAACAATAGGCCGTATTAGAGAGGCATT
GAAAACTACATATGGTTTAAACAGAAGAAGCATTCTTCTCGATATCCCCT
ATTTTGATGTAAGTCAAATGTTGCCGAATGATATTATGCATGTGATGTTG
GAAGGAGTCATTCCATTTGAATGCAAAGAAATTCTTAGAAGAATGATATT
TATTGATAACATTTTTACCTTGAAGGAGCTTAACATCAAAATCAGAACAT
TTAAGTTTGGTCAGACAGAAAGAAAGGACAGGCCGGGTCCTATTCCAGAA
TCTGTTTTCCGTCAAGACAACGCAAAATTGAAAATGACAGCCGACCAGAC
ATGGACCTTCATTCGGCATTTATCTATCATCTTGTCCTCCCTAGATGTTG
ACCCTGAAAATGAGTTCATGGTATTCCTGAACCAACTATGCGAAATAACA
TCACTTGTGTTTTCCAGTATCACATCAAATGAGAACATTATATATCTCCG
TGGTTTGATTTCAGATCATCTTAAGGCATTCAAAAGATTATTCCCTGACA
AGAACATTCTCCCGAAACACCATTATCTTATCCATTTGCCTTCAAGTATG
ATTCTTTTTGGACCGTTGATTCGTGTATGGTGCATGAGATTTGAAGGAAA
GCATGCTTATTTCAAAACACTGGCTAGAAAACAAAATCATGTTAACATTT
CAAAGTCCTTGGCCCAGAGAAGCTTACGTAAAGAGGCAAGTGAATCAATT
CAGCCTAATCATCCTATTTTGGCATCAAAACGTAAATTCGGACCCTGCAA
GCCGCTTTCAAGAGAAGATGCAAATCTTGCTAAAGAGAGAATGCTCATAT
TGTTAGGTATAGAAGTAGATGGCCCAATTTACGCCACAAATTGGGCACAA
CTGTCAGGGACAATGTACACCAAAAATCACGATGGGATTGTTGCCTTTGG
TACCTGTGAATATAACAATTTTTTACCTGAATTTGGAGAAATTAAACACA
TTTGGATTGTAGGGGGGGAGAGGGTATTTCTGGCCTTGAACGTTTTGCAG
ACAGAAGGATATGTTGAGACATATCAGGGTTATGAAGTGTCAAAGCCTGA
CATGGCAACAGGACTGGTAGTTGTTGATAGTACTAATCTCCTAGACCATA
ACATGTACTACAAATATAGGATCCATGACAAATATATTGTGCCATTAAAG
TATGATCTATCGTCTGCAATTGATGCTAGGAATGGTCGGAATGAGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL85272gene:BL85272Branchiostoma lanceolatumgene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL85272_cuf1transcript:BL85272_cuf1-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL85272_cuf1-E1BL85272_cuf1-E1-1564476830-428231Branchiostoma lanceolatumexon
BL85272_cuf1-E2BL85272_cuf1-E2-1564476830-428228Branchiostoma lanceolatumexon
BL85272_cuf1-E3BL85272_cuf1-E3-1564476830-428226Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000299genomeSc0000299:44139..54850 -
Properties
Property NameValue
Transcript idBL85272_cuf1
Biotypeprotein_coding