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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL85156_cuf0 >transcript:BL85156_cuf0-protein ID=transcript:BL85156_cuf0-protein|Name=transcript:BL85156_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=395bp
TVDEASVKLVELILEAKNRCVPHKTVTIRPNDKPWMSPSIRQLMRSRDRT
HKIAKLSNSSAHWEKYRKTRNKLSNAIEQAKVAYEAHLVNQLSNPLTSEK
KWWHIVKHFYRRKSHTAIPPLIDGASFVVDSHEKACLFNDYFASQSSIDT
SQATLPDLTFHTDTRLSCLLTSPEEVELYISDLNISKAQGYDNIDNRFLK
IITPFISDKIAFVFNLSLSHGIFPDIWKRANIIPILKKGDPQNKCNYRPI
SLLPTLSKVLEKIVYKHVYNHLISDNLLYALQSGFIKSDSTVCQLVYICH
LIVQALEDGKEVRSVFLDFSRAFDKVWHSGLLFKLKQNGIEGPLLNWMHT
YLSQRSQRVVLDGQFSPWCEIGAGVPQGSVLGPLLFLVYVNDIVN Run BLAST on NCBI mRNA from alignment at Sc0000286:164348..165534- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL85156_cuf0 ID=transcript:BL85156_cuf0|Name=transcript:BL85156_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1187bp|location=Sequence derived from alignment at Sc0000286:164348..165534- (Branchiostoma lanceolatum)
GGACTGTAGATGAGGCTAGCGTTAAACTTGTTGAATTAATTCTGGAGGCA
AAAAATCGATGCGTCCCTCACAAGACAGTCACTATAAGACCAAATGATAA
ACCTTGGATGTCCCCAAGTATACGCCAACTCATGCGTTCCCGTGATAGAA
CGCATAAGATAGCCAAACTGTCAAATTCCTCGGCTCACTGGGAGAAATAC
CGCAAAACGCGTAACAAACTGTCTAATGCAATTGAGCAAGCCAAGGTTGC
TTATGAAGCGCATTTAGTGAATCAACTTTCTAATCCACTAACCTCTGAAA
AAAAGTGGTGGCACATTGTGAAACATTTCTATAGACGTAAGAGTCACACA
GCAATACCTCCCCTTATAGATGGTGCCTCGTTCGTTGTTGACTCACATGA
AAAGGCCTGTCTTTTTAATGACTACTTTGCTTCCCAATCATCAATTGATA
CATCTCAAGCTACCCTACCTGACCTTACATTTCATACTGATACTAGATTA
TCTTGTCTTCTGACTTCTCCTGAAGAAGTTGAACTATACATCAGTGACCT
AAATATCTCAAAGGCCCAGGGCTATGACAATATCGACAATCGTTTTCTTA
AAATTATTACTCCATTTATATCTGATAAAATAGCATTTGTATTTAATCTA
TCCTTATCACATGGAATATTCCCCGATATTTGGAAAAGAGCTAATATTAT
CCCGATACTCAAGAAAGGTGACCCCCAAAACAAATGCAATTACAGACCAA
TTTCTCTGCTTCCCACTTTGTCGAAGGTCCTCGAGAAAATTGTCTACAAA
CATGTATACAACCACCTTATTTCTGACAATCTTCTATATGCACTCCAATC
AGGTTTTATAAAATCCGACTCCACTGTGTGTCAGTTAGTTTATATATGTC
ATTTGATTGTGCAAGCTCTCGAGGACGGTAAAGAGGTGCGATCTGTTTTC
TTAGATTTCTCGAGGGCCTTCGACAAAGTGTGGCATTCCGGTCTTCTTTT
TAAACTTAAACAGAACGGGATAGAGGGCCCCCTTTTGAATTGGATGCATA
CTTACCTATCACAGAGATCTCAAAGGGTTGTGTTGGATGGACAATTCTCT
CCATGGTGCGAGATTGGCGCTGGGGTCCCCCAGGGATCCGTTTTGGGCCC
TTTACTGTTCCTCGTATATGTTAATGACATAGTTAAC Coding sequence (CDS) from alignment at Sc0000286:164348..165534- >transcript:BL85156_cuf0 ID=transcript:BL85156_cuf0|Name=transcript:BL85156_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1185bp|location=Sequence derived from alignment at Sc0000286:164348..165534- (Branchiostoma lanceolatum)
ACTGTAGATGAGGCTAGCGTTAAACTTGTTGAATTAATTCTGGAGGCAAA
AAATCGATGCGTCCCTCACAAGACAGTCACTATAAGACCAAATGATAAAC
CTTGGATGTCCCCAAGTATACGCCAACTCATGCGTTCCCGTGATAGAACG
CATAAGATAGCCAAACTGTCAAATTCCTCGGCTCACTGGGAGAAATACCG
CAAAACGCGTAACAAACTGTCTAATGCAATTGAGCAAGCCAAGGTTGCTT
ATGAAGCGCATTTAGTGAATCAACTTTCTAATCCACTAACCTCTGAAAAA
AAGTGGTGGCACATTGTGAAACATTTCTATAGACGTAAGAGTCACACAGC
AATACCTCCCCTTATAGATGGTGCCTCGTTCGTTGTTGACTCACATGAAA
AGGCCTGTCTTTTTAATGACTACTTTGCTTCCCAATCATCAATTGATACA
TCTCAAGCTACCCTACCTGACCTTACATTTCATACTGATACTAGATTATC
TTGTCTTCTGACTTCTCCTGAAGAAGTTGAACTATACATCAGTGACCTAA
ATATCTCAAAGGCCCAGGGCTATGACAATATCGACAATCGTTTTCTTAAA
ATTATTACTCCATTTATATCTGATAAAATAGCATTTGTATTTAATCTATC
CTTATCACATGGAATATTCCCCGATATTTGGAAAAGAGCTAATATTATCC
CGATACTCAAGAAAGGTGACCCCCAAAACAAATGCAATTACAGACCAATT
TCTCTGCTTCCCACTTTGTCGAAGGTCCTCGAGAAAATTGTCTACAAACA
TGTATACAACCACCTTATTTCTGACAATCTTCTATATGCACTCCAATCAG
GTTTTATAAAATCCGACTCCACTGTGTGTCAGTTAGTTTATATATGTCAT
TTGATTGTGCAAGCTCTCGAGGACGGTAAAGAGGTGCGATCTGTTTTCTT
AGATTTCTCGAGGGCCTTCGACAAAGTGTGGCATTCCGGTCTTCTTTTTA
AACTTAAACAGAACGGGATAGAGGGCCCCCTTTTGAATTGGATGCATACT
TACCTATCACAGAGATCTCAAAGGGTTGTGTTGGATGGACAATTCTCTCC
ATGGTGCGAGATTGGCGCTGGGGTCCCCCAGGGATCCGTTTTGGGCCCTT
TACTGTTCCTCGTATATGTTAATGACATAGTTAAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000286 | genome | Sc0000286:164348..165534 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL85156_cuf0 |
| Biotype | protein_coding |
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