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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL83456_cuf0 >transcript:BL83456_cuf0-protein ID=transcript:BL83456_cuf0-protein|Name=transcript:BL83456_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=225bp
MEDPSGSYGQQIPKQEEKKSYVYMCGECGYRTARKYHLSRHLRTHTGEKP
YKCDQCDYSAPQKSYLDQHNLSKHSGEKPYVCKECEFKTARKSHLSRHVR
IHTGERPYKCDQCEYSAAQKSNLDQHHLTQHTGEKPYMCGECGYRATRKS
QVSQHMRTHHTGERPYKCDQCDYSAARKSNLDQHHLIKHTGEKPYVCEEC
GYRAAIKSNLSRHIRRAHWRETLQL Run BLAST on NCBI mRNA from alignment at Sc0000010:3011279..3013580- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL83456_cuf0 ID=transcript:BL83456_cuf0|Name=transcript:BL83456_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2302bp|location=Sequence derived from alignment at Sc0000010:3011279..3013580- (Branchiostoma lanceolatum)
GGCGTTTTTGTTGGACTGTCTACTTTGTCATGTTAAGCCCCCCTCTCGCT
GGACCCACGGCACGCTGGCGGCGTCGCTGCGTCCTAAACTGGATCTGTGT
TACCCTTGACTTTATAATGGTAATAGCATTCAAAACGTACAAGTATGACC
AAAAGACAACAAAACAGTAATCATATAACGAGTAACGAAATCCTACCCAA
GACGTATAAATAGAATGAGAATATTAATACACCGCCTCAGTAAATCCCTT
GAGATTGAGGACGCTTTTTTTCTCACGGAAAAGTCTGGAAACGCGTTTGA
CGGGCGTCAGTCTGTGGACGCTGCTGCCAGCGAGAGACCACCGTGGAGTC
TGAGGTACAAATTTTAGCATAATTCAGAAGTCTATATGTATGTCAAAGTG
GTATAAAAGGCCTTAGATTCATTTGGTTCTTTAATAGATATTGGAATTAT
AGAACGAAAGGACGTATGATGCTATGATAGTATTTAGAGACCGACTGTGG
TTTGCGTCGCATGCGAAGTTTGACGAATCCTACCTCAAACTCAATATTTT
TGCAAAGTTCTCTGTATTTTGTTGCCACTATACTCATTTCTTATCCGGAT
CCTGTACTCATAATGTCCTTAAGATATTTCTTGATGTATGTAGATCATCT
GGAAATTCATATTTGCTCTAGAAATTATGTGATTATCTGGTGTGGTATAA
AGTTGACAGTTTTCTACATAACGTTACATGTCGTTGTGGGGCACGTACGT
TTGCTGTTTTGGCCACGCCTCGGGGGCGATGTCTTGCATTCCTACAAGAG
GGGTGCCGACAACACTTAACGCTGATTTCAGAAAAACCAATTACGATAAA
TTTGGTCGCCTCGCTACGAATCACATGAATTAGGCGAGCATGCATGGATC
GCATGTTATTTGCGAATTCAGACCCATTTTCGCTAATGCGATAATGGGAA
AAAGTGCATCATCTTGCGCATGCTTGCAGACGACATGCCAAACTATTCCT
CATGCAGCAAAGGGACCTCGAGTCGTAGCTGCGAACGTACGTACAATTGC
AACCCTTATACCACAATAGTCCTCCAGGAGGTGACCCTCCTTCCCAGAGA
TGATAAGTTGTTGAATAAATCAACATATCTTTGTTCCCAAACAGATTAAA
TCCAACAATGGAAGATCCCAGCGGTAGCTATGGACAACAGATACCAAAGC
AAGAAGAAAAGAAATCATACGTATACATGTGCGGAGAGTGTGGATACAGG
ACAGCTCGGAAGTATCATTTATCCAGGCACTTAAGAACTCATACAGGAGA
GAAGCCCTACAAGTGTGACCAGTGTGACTATTCTGCACCACAGAAATCCT
ACTTGGACCAACATAATCTCTCTAAGCACTCTGGTGAGAAACCCTATGTA
TGTAAGGAGTGTGAATTCAAGACAGCTCGAAAGTCTCACTTATCCCGACA
TGTGAGAATCCATACAGGGGAGAGGCCTTACAAGTGTGACCAGTGCGAAT
ATTCTGCAGCACAGAAATCTAATCTGGACCAGCACCATCTCACACAACAC
ACTGGAGAGAAACCATACATGTGTGGGGAGTGTGGGTACAGGGCAACTCG
CAAGTCTCAGGTATCACAGCACATGAGAACTCATCATACAGGGGAGAGGC
CTTACAAGTGTGACCAGTGTGACTATTCTGCAGCACGGAAATCTAATCTG
GACCAGCATCATCTCATAAAACACACTGGTGAGAAACCTTATGTATGTGA
GGAGTGCGGATACAGGGCAGCAATAAAATCGAACCTATCCCGACACATAA
GGAGGGCACACTGGAGAGAAACCCTACAACTGTGAGGAGTGCGGATACAG
GACAGCTCGGAAGTATCATTTATCCGGTCATATGAGAACTCATACAGAAG
ACAGGCCCTACAAGTGTGACCAGTGTGACTATTCTGCAGCACGGAAATCC
AATTTGGACAAACACCATTTCCTTTCCATAGTACGGTGAGAGCCCCTACA
CATGTGAGGAGTGTTGATACAGGGAAGCTATAAAGTCTCAGTTATCCCGA
CACATATGAGAGCCCATACAGGAGGAAAATCCTACAACTGTACATGTAGC
CAATGTGACTATTCTGCTGGAAGCAGATCTACTTTGGACAAACATCTGAA
AACACAGCACACCTGAGAGAAGGGAGTGTGGAGTACAGGGCAACTCTGAA
CAACGTCTTCAATTGCAAGTTCCAAACAGAGTCGATATTTAGGGACTTAC
AGAGAAGAAGAAGAGAATCTTCAGGTTCTAAATTTTTTAGCAAGCGTTTA
CT Coding sequence (CDS) from alignment at Sc0000010:3011279..3013580- >transcript:BL83456_cuf0 ID=transcript:BL83456_cuf0|Name=transcript:BL83456_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=678bp|location=Sequence derived from alignment at Sc0000010:3011279..3013580- (Branchiostoma lanceolatum)
ATGGAAGATCCCAGCGGTAGCTATGGACAACAGATACCAAAGCAAGAAGA
AAAGAAATCATACGTATACATGTGCGGAGAGTGTGGATACAGGACAGCTC
GGAAGTATCATTTATCCAGGCACTTAAGAACTCATACAGGAGAGAAGCCC
TACAAGTGTGACCAGTGTGACTATTCTGCACCACAGAAATCCTACTTGGA
CCAACATAATCTCTCTAAGCACTCTGGTGAGAAACCCTATGTATGTAAGG
AGTGTGAATTCAAGACAGCTCGAAAGTCTCACTTATCCCGACATGTGAGA
ATCCATACAGGGGAGAGGCCTTACAAGTGTGACCAGTGCGAATATTCTGC
AGCACAGAAATCTAATCTGGACCAGCACCATCTCACACAACACACTGGAG
AGAAACCATACATGTGTGGGGAGTGTGGGTACAGGGCAACTCGCAAGTCT
CAGGTATCACAGCACATGAGAACTCATCATACAGGGGAGAGGCCTTACAA
GTGTGACCAGTGTGACTATTCTGCAGCACGGAAATCTAATCTGGACCAGC
ATCATCTCATAAAACACACTGGTGAGAAACCTTATGTATGTGAGGAGTGC
GGATACAGGGCAGCAATAAAATCGAACCTATCCCGACACATAAGGAGGGC
ACACTGGAGAGAAACCCTACAACTGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000010 | genome | Sc0000010:3011279..3013580 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL83456_cuf0 |
| Biotype | protein_coding |
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