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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL83158_cuf0 >transcript:BL83158_cuf0-protein ID=transcript:BL83158_cuf0-protein|Name=transcript:BL83158_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=113bp
MKEIISVGAGRSITIRHPVRPAQLDPHLTNKATTNWPLWPSVLGPITIES
YRSGPSNFPSPRADSGNLCSIHQSGGISTFLQENRRQTSRTTSRHFHCTL
TCHSVQRVGCPGS Run BLAST on NCBI mRNA from alignment at xfSc0000603:299..2082- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL83158_cuf0 ID=transcript:BL83158_cuf0|Name=transcript:BL83158_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1784bp|location=Sequence derived from alignment at xfSc0000603:299..2082- (Branchiostoma lanceolatum)
AGGTATTGCATCCCTCGGGCTATTTGCAGGGCCCAGTCTATAAGAATCTC
TGGAGGAATCTTCCTCCCTGCCAGTACTCTGTTCAATGCTCCTCCCTCGT
AGTACTCCATAACTAGACACAAGTTTGGCGGTTTTAAACAAACTCCTTTC
AAAGTCGCCACATTTGGATGATCAAGCAGCCAGAAAAGTTTCGCTTCTTG
TCGAACTTGTTGGACTATAACATTTATATCATCGTCCAGATCTTGTCGTG
CCGCCTTCACGGCGACGAGCTCTCCCCGCCAGGCGCCTCGGTACACCTTC
CCGAACCCTCCGCACCCGATCACTTCGTTCAGCTGTAACTCCGAGAAGTC
GATGCTACAGGGCACGGCGTCTCCGTTGACGGCGTCGTTCATGCGGACAT
AATTGGACGGGAAGATGCCGACCAGACCGTCGATCTTGCCGGTCCACCAG
CCGTCGTCCCCGGACACTTTGCTGTCGGTGGACAACACCTCCACTCGGTC
CCCTTGGCGGAGCGTCAGCTCGTCGTCCGCGTTCGCGTCGTAGTCGAAGA
CGGCGGTCCATAGTGGGGCCTTCGGGTCACTGTCACGTTTACGATCGCCC
CCACGGCGGTTAGTACCCGTCCCGAACCGCGATCTGAACGGATCCATGAA
GGAAATAATCTCGGTCGGCGCAGGTCGCTCGATCACCATTCGGCATCCGG
TCCGGCCAGCCCAGCTTGATCCTCACCTCACCAACAAAGCAACTACCAAC
TGGCCTCTCTGGCCTTCTGTCCTGGGACCAATAACCATTGAAAGCTACCG
ATCAGGACCTAGTAACTTTCCTAGTCCACGAGCAGACTCCGGAAATCTGT
GTTCAATCCATCAGTCTGGAGGAATTTCCACTTTTCTGCAGGAGAACCGC
CGCCAAACGTCTCGGACGACTAGCCGCCATTTTCATTGTACTTTGACCTG
CCATAGTGTACAGAGGGTGGGGTGTCCCGGGTCCTGATTGGTCCAGGGCA
CCACGTGATCTAAACACCCCCAAAACACTCCCAAAACGAGGGATGATTTT
GATGATGCAGAAATCCTGAAAAATAAAAAGTAACCGCCATATTTCACTCC
TGGGTGGTATCCATGAATTATTTCCTTGCAACGAAATAAAAAAGAAAATG
GCATCAGATGATTTTTACTAATCACTTTAATTTTTATAATGTGGTCTAAT
GGGATTTCACCGACATCAATTCTCATATTTTTTTAGGAAAAAGTATTTTG
AAGCGGTAACGCTAGTTTAGTACCAAAAATGTTCATGCCTGCTCTATCTT
TTTAATGCAGACCTGTGATATTCACAGCCTTATTGTATTCGTTGTTCAAT
TGATTTGGTCAAGTTCTAAGTTATGTCCAGAAATTAGAGAGAAAATTTCA
GGTACTTGTTGCGTCCAGGCCTCAGTCGCGGCGTACTCTGCTCGGGAAGG
GAAGTGGTCCAAGACTCACGATGTTGCTGATTACTATAACTTTCTGTTCA
GGAAAATAAAAGTTATGGAATCCAAACAGCGCTTGACACTTACAGTCAAC
ATCGCATCGTCATTTTCCTGTTGCAACTGCCGGGATACGGCAGAAGTATA
GAGGGATGCATACCTTTCAAACAGATGGAATGATGGACGATGAATTGGTT
ACCAAATCAAATTGTTGCCTAACAATAGTCATAAGATTTAACAAATGACT
CACTACTTCAAACCGTGACTACAAGCTGGATTATGCCTTCATTCCTTCAA
CAGCGAACCGTGAACAGCATAACCTGACTTCATC Coding sequence (CDS) from alignment at xfSc0000603:299..2082- >transcript:BL83158_cuf0 ID=transcript:BL83158_cuf0|Name=transcript:BL83158_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=342bp|location=Sequence derived from alignment at xfSc0000603:299..2082- (Branchiostoma lanceolatum)
ATGAAGGAAATAATCTCGGTCGGCGCAGGTCGCTCGATCACCATTCGGCA
TCCGGTCCGGCCAGCCCAGCTTGATCCTCACCTCACCAACAAAGCAACTA
CCAACTGGCCTCTCTGGCCTTCTGTCCTGGGACCAATAACCATTGAAAGC
TACCGATCAGGACCTAGTAACTTTCCTAGTCCACGAGCAGACTCCGGAAA
TCTGTGTTCAATCCATCAGTCTGGAGGAATTTCCACTTTTCTGCAGGAGA
ACCGCCGCCAAACGTCTCGGACGACTAGCCGCCATTTTCATTGTACTTTG
ACCTGCCATAGTGTACAGAGGGTGGGGTGTCCCGGGTCCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0000603 | genome | xfSc0000603:299..2082 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL83158_cuf0 |
| Biotype | protein_coding |
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