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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL82986_cuf0 >transcript:BL82986_cuf0-protein ID=transcript:BL82986_cuf0-protein|Name=transcript:BL82986_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=392bp
MSETFRCHRGVRQGCILSPFLFAFFISDLTKHLKENGCRGIQVHDTEILD
LMFADDLAVCADSVVGLQRALNALNSYCHKWGLTVNEEKTTVMVFRKGGA
LRKNEKWLYEGSRVEVVNTYKYLGTLISSSGRWFRAQEALAGQASKALFI
MKKNMAKFGTLPPDLTFKMFNTLILPIMTYCCELWGFHGANQLDILHSKF
CKFFLGVGQSTSNVAVRGELGRYPLGVLRRISIVKFWLKLLEMNDIRYSK
KCYKMLCDLEKVGRGAWVSEVSGLLFSKGLGEAWVNQSIGNKNAFIALFK
KRIVTQDIEQWKVEIMTSNRLATYSTVKDRFAVEKYLKVLTNFEQRRAIA
RLRCAGHNLNIEKGRHTKTEKRARLCQLCSEGVVEDEYHFVL Run BLAST on NCBI mRNA from alignment at Sc0000452:21234..23257- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL82986_cuf0 ID=transcript:BL82986_cuf0|Name=transcript:BL82986_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2024bp|location=Sequence derived from alignment at Sc0000452:21234..23257- (Branchiostoma lanceolatum)
AGGGTACAAAGCTTTGGTCAGGGCAAAACGTAGGGCACATACAGCGAATC
TTAGGACTCGATTAAGAAACTTACATAGAGAACCCAAAGAATTTTGGTCA
CTTATAAAGGGGAAACGGGTTAGTACGATAGGCAACATTAGCGCCCAGGA
GTTTGCAAACTTTTTCGAGGAACTTCATGGTAGTTTGGGCGAAGACGAAC
TGCACATTCATGAACCACAAGAGAGTCTATTACACGACACGGTCAATGAC
ATCCTGGATAAGGACATTACAGAGGCTGAGATTATGAACAGTGTAAGAAA
TCTAAAGCCTGGCAAATCACCTGGCATTGATAAACTGTTACCAGAATTTT
TTCAGGAGAGTATACCAATTTTATTGCCCTATCTGAAAATATTGTTCAAC
AAGTGTTTCAGTCTAGGTATATTCCCAAAGCAATGGACAGTCGGTATCAT
ACACCCACTGTTCAAATCAGGCTTGAAGGACAATGTGAATAATTACAGAA
GTATAACATTACTCTCTATCTTTGGTAAAATCTTCCTGTCGGTATTAGAA
AAACGAATAAACAACTGGATGCAGGAAGAAGAGAAGTTCGATGAATCGCA
AATGGGTTTTAGGAAAAACTATGGGGTGATTGATAACTTATTTTGTTAAA
ATGCTTTAACACAAAAATACCTAACAGGGAAGAGGGCGCTTCTATGTCGC
ATTTATCGACTTTTCTAAAGCGTTCGATAGTATTAATCGATCACACCTGT
GGTTTAAACTAGCAAGAGGAAAAATAAGTAAACAGATATCTGTTATTCTA
CAAGCTCTTTATGAGGATGTCAGATCCTGCGTGAGAATAAATGTAGATAT
GAGTGAGACATTCAGATGCCACCGCGGAGTAAGACAGGGATGTATATTAT
CTCCATTCTTATTTGCCTTTTTTATAAGTGATCTGACTAAGCATTTAAAA
GAAAACGGATGTAGGGGAATTCAGGTTCATGACACCGAAATACTAGATTT
AATGTTTGCCGATGATCTGGCAGTATGTGCAGACTCTGTCGTGGGGTTAC
AACGGGCGCTAAATGCACTAAATTCGTATTGCCACAAATGGGGATTAACT
GTTAACGAAGAAAAAACAACGGTTATGGTTTTCAGAAAAGGGGGGGCACT
AAGAAAAAATGAAAAGTGGCTTTATGAGGGAAGCAGGGTAGAAGTAGTAA
ATACGTATAAGTATTTAGGGACATTAATATCCTCAAGTGGAAGATGGTTT
CGGGCACAGGAGGCCTTAGCTGGTCAAGCGTCGAAGGCCTTATTTATTAT
GAAAAAGAATATGGCCAAATTTGGTACCTTACCTCCAGATTTGACGTTTA
AAATGTTCAATACACTTATCCTGCCGATCATGACGTATTGCTGTGAATTA
TGGGGCTTTCATGGTGCCAATCAACTAGACATTTTACACAGCAAATTTTG
CAAATTCTTTTTAGGAGTCGGACAATCCACATCCAATGTGGCAGTGAGGG
GTGAACTCGGGAGATACCCCCTCGGTGTTCTGAGACGAATTAGTATTGTG
AAATTTTGGTTGAAATTACTAGAAATGAACGACATTAGGTATTCTAAGAA
ATGCTACAAAATGTTGTGCGATTTAGAAAAAGTGGGCAGGGGAGCCTGGG
TAAGTGAAGTAAGTGGTTTATTATTCAGTAAAGGGTTGGGTGAAGCATGG
GTCAATCAAAGTATAGGGAATAAAAACGCGTTCATTGCACTGTTCAAGAA
ACGAATAGTGACCCAGGATATAGAACAGTGGAAGGTTGAAATCATGACCA
GCAACCGTCTAGCTACATACAGCACGGTTAAGGATAGATTTGCGGTTGAG
AAATATTTAAAGGTACTAACTAACTTCGAGCAGAGACGAGCGATTGCGCG
ATTACGTTGCGCAGGACACAATCTAAATATTGAAAAGGGCAGGCACACAA
AAACTGAAAAACGGGCAAGGCTGTGTCAGCTATGCAGTGAAGGTGTGGTA
GAGGATGAATATCATTTTGTACTC Coding sequence (CDS) from alignment at Sc0000452:21234..23257- >transcript:BL82986_cuf0 ID=transcript:BL82986_cuf0|Name=transcript:BL82986_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1176bp|location=Sequence derived from alignment at Sc0000452:21234..23257- (Branchiostoma lanceolatum)
ATGAGTGAGACATTCAGATGCCACCGCGGAGTAAGACAGGGATGTATATT
ATCTCCATTCTTATTTGCCTTTTTTATAAGTGATCTGACTAAGCATTTAA
AAGAAAACGGATGTAGGGGAATTCAGGTTCATGACACCGAAATACTAGAT
TTAATGTTTGCCGATGATCTGGCAGTATGTGCAGACTCTGTCGTGGGGTT
ACAACGGGCGCTAAATGCACTAAATTCGTATTGCCACAAATGGGGATTAA
CTGTTAACGAAGAAAAAACAACGGTTATGGTTTTCAGAAAAGGGGGGGCA
CTAAGAAAAAATGAAAAGTGGCTTTATGAGGGAAGCAGGGTAGAAGTAGT
AAATACGTATAAGTATTTAGGGACATTAATATCCTCAAGTGGAAGATGGT
TTCGGGCACAGGAGGCCTTAGCTGGTCAAGCGTCGAAGGCCTTATTTATT
ATGAAAAAGAATATGGCCAAATTTGGTACCTTACCTCCAGATTTGACGTT
TAAAATGTTCAATACACTTATCCTGCCGATCATGACGTATTGCTGTGAAT
TATGGGGCTTTCATGGTGCCAATCAACTAGACATTTTACACAGCAAATTT
TGCAAATTCTTTTTAGGAGTCGGACAATCCACATCCAATGTGGCAGTGAG
GGGTGAACTCGGGAGATACCCCCTCGGTGTTCTGAGACGAATTAGTATTG
TGAAATTTTGGTTGAAATTACTAGAAATGAACGACATTAGGTATTCTAAG
AAATGCTACAAAATGTTGTGCGATTTAGAAAAAGTGGGCAGGGGAGCCTG
GGTAAGTGAAGTAAGTGGTTTATTATTCAGTAAAGGGTTGGGTGAAGCAT
GGGTCAATCAAAGTATAGGGAATAAAAACGCGTTCATTGCACTGTTCAAG
AAACGAATAGTGACCCAGGATATAGAACAGTGGAAGGTTGAAATCATGAC
CAGCAACCGTCTAGCTACATACAGCACGGTTAAGGATAGATTTGCGGTTG
AGAAATATTTAAAGGTACTAACTAACTTCGAGCAGAGACGAGCGATTGCG
CGATTACGTTGCGCAGGACACAATCTAAATATTGAAAAGGGCAGGCACAC
AAAAACTGAAAAACGGGCAAGGCTGTGTCAGCTATGCAGTGAAGGTGTGG
TAGAGGATGAATATCATTTTGTACTC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000452 | genome | Sc0000452:21234..23257 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL82986_cuf0 |
| Biotype | protein_coding |
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