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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL77628_cuf2 >transcript:BL77628_cuf2-protein ID=transcript:BL77628_cuf2-protein|Name=transcript:BL77628_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=231bp
MVRTNDRELKQNLLKLIKETEKTFLQHTVGTPSEPSPYDVDICHKKQLQE
MRDSVKRTLETIHNEHNPYQYNEDDPVVREVEVKRAEAIEDLCKKIANER
QVFIQALLEECTVKLGAPPCKYAVIGLGSQATELVTPYSDLEFAILIGDE
KDNEDTRRYFLNLTHYLHLKVINLGETIIPAMAIPSLNDFQSDDPSRDWF
YDSVTPRGFAFDGFMPWASKTPFGRDQTKTN Run BLAST on NCBI mRNA from alignment at Sc0000159:517348..518398+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL77628_cuf2 ID=transcript:BL77628_cuf2|Name=transcript:BL77628_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=1051bp|location=Sequence derived from alignment at Sc0000159:517348..518398+ (Branchiostoma lanceolatum)
CAAACGTCGAAGAACTTGAATATGTGATATTTGGGTAGAAAAGATGATCA
CCTGATATAACGTATGAAAATTCAAATGAGACATATTTATGATACGTCAC
CCGAAAAGGTTAATATCATTTGACGAAGGTATGAGGTCGCGGAACTCTAG
TTAAACTTCATATGAATTCTCGTTCACCATGATGTTATAACCCTCACAGC
TACCAGTGTCTGTCTAACCCATAGGTGATCCAAATCAATCCAAACTTCGG
GAAGAAGCCGACTGTCTTAGGAAACTGGCTGACGTTTACCTGAAACGAGG
AATACAGACGAAAGAAGGAAGGAATTTCACACAAGCATCAGCTCTGTACC
ACGCAGCCATGGTCAGAACAAACGATAGGGAGCTCAAACAAAATCTCCTT
AAACTGATCAAAGAAACAGAAAAAACGTTTCTTCAACACACAGTGGGAAC
ACCCAGTGAACCGAGCCCATACGATGTAGATATCTGCCACAAAAAGCAGT
TGCAGGAAATGCGAGATAGTGTAAAGCGTACGCTAGAAACAATTCACAAC
GAACACAATCCCTACCAGTATAATGAAGATGATCCAGTAGTAAGAGAAGT
AGAGGTTAAACGAGCTGAAGCGATCGAAGACTTGTGTAAAAAAATCGCTA
ACGAAAGGCAAGTTTTCATCCAGGCGCTCCTTGAAGAATGCACAGTCAAA
CTCGGTGCTCCCCCTTGTAAATATGCAGTTATTGGCTTGGGCTCACAAGC
AACAGAACTAGTCACACCGTATTCTGATCTGGAGTTCGCCATTCTGATCG
GGGATGAGAAGGACAATGAGGACACACGACGGTACTTCCTCAACCTCACA
CACTACTTACATCTGAAGGTAATCAACCTTGGAGAAACTATCATCCCAGC
AATGGCGATTCCATCCTTGAATGACTTCCAATCTGACGACCCAAGTAGAG
ACTGGTTCTATGACTCTGTCACACCTCGTGGTTTCGCCTTCGATGGTTTC
ATGCCCTGGGCCAGTAAAACTCCTTTCGGGAGAGACCAAACGAAAACGAA
C Coding sequence (CDS) from alignment at Sc0000159:517348..518398+ >transcript:BL77628_cuf2 ID=transcript:BL77628_cuf2|Name=transcript:BL77628_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=693bp|location=Sequence derived from alignment at Sc0000159:517348..518398+ (Branchiostoma lanceolatum)
ATGGTCAGAACAAACGATAGGGAGCTCAAACAAAATCTCCTTAAACTGAT
CAAAGAAACAGAAAAAACGTTTCTTCAACACACAGTGGGAACACCCAGTG
AACCGAGCCCATACGATGTAGATATCTGCCACAAAAAGCAGTTGCAGGAA
ATGCGAGATAGTGTAAAGCGTACGCTAGAAACAATTCACAACGAACACAA
TCCCTACCAGTATAATGAAGATGATCCAGTAGTAAGAGAAGTAGAGGTTA
AACGAGCTGAAGCGATCGAAGACTTGTGTAAAAAAATCGCTAACGAAAGG
CAAGTTTTCATCCAGGCGCTCCTTGAAGAATGCACAGTCAAACTCGGTGC
TCCCCCTTGTAAATATGCAGTTATTGGCTTGGGCTCACAAGCAACAGAAC
TAGTCACACCGTATTCTGATCTGGAGTTCGCCATTCTGATCGGGGATGAG
AAGGACAATGAGGACACACGACGGTACTTCCTCAACCTCACACACTACTT
ACATCTGAAGGTAATCAACCTTGGAGAAACTATCATCCCAGCAATGGCGA
TTCCATCCTTGAATGACTTCCAATCTGACGACCCAAGTAGAGACTGGTTC
TATGACTCTGTCACACCTCGTGGTTTCGCCTTCGATGGTTTCATGCCCTG
GGCCAGTAAAACTCCTTTCGGGAGAGACCAAACGAAAACGAAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000159 | genome | Sc0000159:517348..518398 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL77628_cuf2 |
| Biotype | protein_coding |
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