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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL77594_cuf0 >transcript:BL77594_cuf0-protein ID=transcript:BL77594_cuf0-protein|Name=transcript:BL77594_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=280bp
MENNKTPGSDGLPKEFYVTFWNIIKDDLLSVFEEIFSEGHLCDSQKFSVI
TLLPKKGDPLDPKNRRPISLLNTDYKILTKVLNNRLKLVVASVLSEDQTC
GVPGRSIHCNLRLMRDIVTYANDNNLNCAVISLDQAKAFDRVNISFLQKT
LCRMGFGPVFRQWISILYNDICSSVLVNGSLSTSFLLSRGVRQGCPLSPL
LYALSLEPFAATVRADPDIHGIKLPGGREIKLSQYADDNSSIVTTDYSIH
RLFEVIDVYSKGSGSLLNLGKCEGLWLGRW Run BLAST on NCBI mRNA from alignment at xpSc0039797:14448..15657- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL77594_cuf0 ID=transcript:BL77594_cuf0|Name=transcript:BL77594_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1210bp|location=Sequence derived from alignment at xpSc0039797:14448..15657- (Branchiostoma lanceolatum)
ATGAGTCAACTAAGTCCTCTCTCTCGGTTCTTTCTGCTAAGGAAGCTGAG
GGAGCGTTTATACGCTCCAGAATCAAGCACTTTGTAGATGGTGAGAAATG
TACTTCTTTCTTTGTGCGACAGGCTTCTTCAAAATCTAGGAAGAAACGCA
TCTCGTCTGTTAGAAATTCCTCTGGTCAAATTGTTCATGAGGACGATTTG
ATCCTAGAGGTTTTTAAAGACTTTTATGAGGACCTATTCACTGAGGTACC
TATTGATGAATCTGCCGCTGACTCTTTGTGCGACAATCTCGAGAGTTCGC
TTGACTCAACGAGGTTTCTTCCTTAGAAGTTCCTCTCTCTGTCGTAGAGC
TGTCGTCTGCTCTGGGCAGTATGGAGAATAATAAAACTCCTGGTAGCGAC
GGGCTACCAAAAGAATTTTACGTCACATTCTGGAACATCATCAAAGATGA
CCTTCTCTCTGTTTTCGAGGAGATTTTTTCTGAGGGTCACCTTTGTGACA
GTCAGAAATTTAGTGTCATCACGCTCCTCCCAAAAAAAGGTGACCCTCTG
GATCCAAAAAATCGTCGTCCCATATCCTTGTTGAATACTGATTATAAAAT
TCTGACCAAGGTCTTGAATAACAGATTGAAATTAGTCGTGGCATCTGTTC
TCAGCGAAGATCAGACTTGCGGTGTCCCTGGTCGATCTATTCACTGCAAT
CTGCGGTTGATGAGGGACATCGTTACTTATGCTAATGACAATAATCTGAA
CTGCGCTGTCATCTCCCTTGACCAAGCCAAGGCGTTTGACAGGGTCAATA
TCTCTTTTCTGCAGAAAACACTCTGTAGGATGGGCTTTGGTCCTGTTTTT
CGACAGTGGATCTCTATTTTATACAATGATATCTGTAGCTCTGTTCTAGT
CAATGGATCCCTGTCTACTTCTTTTCTGCTCTCTAGGGGCGTTCGTCAGG
GCTGCCCCCTGTCACCCCTGCTGTATGCTTTGTCCCTGGAACCTTTTGCA
GCCACTGTCCGCGCTGATCCAGATATTCACGGTATCAAGCTGCCTGGTGG
CCGTGAAATTAAACTTTCTCAGTATGCTGACGACAATTCGTCCATTGTCA
CTACTGATTATTCTATTCATCGTCTCTTTGAAGTTATTGATGTTTATAGT
AAGGGGTCTGGGTCTTTGCTTAACCTCGGCAAGTGTGAAGGACTGTGGCT
AGGGAGGTGG Coding sequence (CDS) from alignment at xpSc0039797:14448..15657- >transcript:BL77594_cuf0 ID=transcript:BL77594_cuf0|Name=transcript:BL77594_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=840bp|location=Sequence derived from alignment at xpSc0039797:14448..15657- (Branchiostoma lanceolatum)
ATGGAGAATAATAAAACTCCTGGTAGCGACGGGCTACCAAAAGAATTTTA
CGTCACATTCTGGAACATCATCAAAGATGACCTTCTCTCTGTTTTCGAGG
AGATTTTTTCTGAGGGTCACCTTTGTGACAGTCAGAAATTTAGTGTCATC
ACGCTCCTCCCAAAAAAAGGTGACCCTCTGGATCCAAAAAATCGTCGTCC
CATATCCTTGTTGAATACTGATTATAAAATTCTGACCAAGGTCTTGAATA
ACAGATTGAAATTAGTCGTGGCATCTGTTCTCAGCGAAGATCAGACTTGC
GGTGTCCCTGGTCGATCTATTCACTGCAATCTGCGGTTGATGAGGGACAT
CGTTACTTATGCTAATGACAATAATCTGAACTGCGCTGTCATCTCCCTTG
ACCAAGCCAAGGCGTTTGACAGGGTCAATATCTCTTTTCTGCAGAAAACA
CTCTGTAGGATGGGCTTTGGTCCTGTTTTTCGACAGTGGATCTCTATTTT
ATACAATGATATCTGTAGCTCTGTTCTAGTCAATGGATCCCTGTCTACTT
CTTTTCTGCTCTCTAGGGGCGTTCGTCAGGGCTGCCCCCTGTCACCCCTG
CTGTATGCTTTGTCCCTGGAACCTTTTGCAGCCACTGTCCGCGCTGATCC
AGATATTCACGGTATCAAGCTGCCTGGTGGCCGTGAAATTAAACTTTCTC
AGTATGCTGACGACAATTCGTCCATTGTCACTACTGATTATTCTATTCAT
CGTCTCTTTGAAGTTATTGATGTTTATAGTAAGGGGTCTGGGTCTTTGCT
TAACCTCGGCAAGTGTGAAGGACTGTGGCTAGGGAGGTGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xpSc0039797 | genome | xpSc0039797:14448..15657 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL77594_cuf0 |
| Biotype | protein_coding |
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