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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL77539_cuf0 >transcript:BL77539_cuf0-protein ID=transcript:BL77539_cuf0-protein|Name=transcript:BL77539_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=216bp
MMNNMADSESRCHKQEHTSEKPHMCGECGYRASYRSILSQHMRTHTGEKP
YKCDQCDYSAAQKMTLERHQVKHTGEKLYMCEECGYRATKRSDLSRHIRS
HTGEKPFKCDQCDYSAARKSTLDQHQVKHTGEKPNMCGKCGYRTAHKSHL
SIHMRTHTGDKPYKCDQCDYSAAQKSTLDQHRVIHTGEKPYMCGECGYRT
VRKFNLSVHMRTHTGE Run BLAST on NCBI mRNA from alignment at Sc0001671:1971..3506+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL77539_cuf0 ID=transcript:BL77539_cuf0|Name=transcript:BL77539_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1536bp|location=Sequence derived from alignment at Sc0001671:1971..3506+ (Branchiostoma lanceolatum)
CGAACATCCGTTATCTTCAGTGGGTAATCAGGCACATGTTGTGACCCCTG
TTGACCCCAACTGACCTCCACACGGGTCACTGACTCACCGGTAGGAAAGG
AACGCGACGCGACGGTCAGGTTTTTCCAGCGATTTGATCTACTTGTCGTG
TTTTGGTGAGTACTAAAGACGGAAAAGGCTAGGGTAGATATTATTACTTA
ATGTCCGTCTGACTTATTCTGTCCAAAACAAATTATGCTATCGTTCGACC
TAGGACCGACGCATCGTGTTGTCTAAAATTATGGGGAGGGGGGCGAAAGT
TTGACATTTTAATTCATTTGTCAGACGAAACGTTAAGTTGCAGTAGAAAC
ATAATATATGCGGATTTCTATCCAAAATACTCCAACACCTAGAAATTATA
CCTGAGGCTGTAGCTCATAATTTTTCTCAACATACTGTTGATTATAAAGA
TGGCCGCCTTATAATTTGTTTACTTGTCTGTGAGCCAGTGTGAGGTCTTC
TCGTATAAATTCCATTTCAGCCAGAGTGATGATTTCCATGCATCTGCTTT
CTTCTGGTGTGCCGTATGCGTCGCGTATTCTCTCTGCCTCTAGCAGCATC
TGATGTTTTGTAACCGAGGAAATGAGCATGAAAGGACGTTGTACTTTTTG
ACAGTGCCAGAAGTTGCTCTGGAGTGATACAATCCAGTACAAGGCCACTA
CTACTGCATCAATATTTCAGTAACGTCTAACCGTTTCCAAAATCTATTTA
GTTGCTTGAGAAACTGCTACCTTGCATACCGTTGCCTTGTATTCAAGAAA
AACTTACAAGGGCAAATACCAGTAGGCAATTGCCATAAATTTATACTGAT
TGTGATTAATTTATCGAATGATAATCTTTCAGATAAATGATGAACAATAT
GGCTGATTCCGAATCTAGATGTCACAAGCAAGAGCATACCAGTGAGAAGC
CCCACATGTGTGGGGAGTGTGGGTACAGGGCATCTTATAGATCTATCTTA
TCCCAACATATGAGAACACATACAGGAGAGAAGCCCTACAAGTGTGACCA
GTGTGACTATTCTGCAGCTCAGAAAATGACTTTGGAACGACATCAAGTAA
AACACACTGGCGAGAAACTATACATGTGTGAGGAGTGTGGGTACAGGGCA
ACTAAGAGGTCTGACTTATCCCGACATATAAGGAGTCATACAGGAGAGAA
ACCCTTCAAGTGTGACCAGTGTGACTATTCTGCAGCCAGGAAATCGACTT
TGGACCAACATCAAGTAAAACACACTGGTGAGAAACCCAACATGTGTGGT
AAGTGTGGGTACAGAACTGCTCATAAGTCTCACTTATCCATACACATGAG
AACTCATACAGGAGATAAACCCTACAAGTGTGACCAGTGTGACTATTCTG
CAGCACAGAAATCGACTTTGGACCAACATCGAGTGATACACACTGGTGAG
AAACCCTACATGTGTGGGGAGTGTGGGTACAGGACAGTTAGGAAGTTTAA
CTTATCCGTGCACATGAGAACTCATACTGGAGAGAA Coding sequence (CDS) from alignment at Sc0001671:1971..3506+ >transcript:BL77539_cuf0 ID=transcript:BL77539_cuf0|Name=transcript:BL77539_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=648bp|location=Sequence derived from alignment at Sc0001671:1971..3506+ (Branchiostoma lanceolatum)
ATGATGAACAATATGGCTGATTCCGAATCTAGATGTCACAAGCAAGAGCA
TACCAGTGAGAAGCCCCACATGTGTGGGGAGTGTGGGTACAGGGCATCTT
ATAGATCTATCTTATCCCAACATATGAGAACACATACAGGAGAGAAGCCC
TACAAGTGTGACCAGTGTGACTATTCTGCAGCTCAGAAAATGACTTTGGA
ACGACATCAAGTAAAACACACTGGCGAGAAACTATACATGTGTGAGGAGT
GTGGGTACAGGGCAACTAAGAGGTCTGACTTATCCCGACATATAAGGAGT
CATACAGGAGAGAAACCCTTCAAGTGTGACCAGTGTGACTATTCTGCAGC
CAGGAAATCGACTTTGGACCAACATCAAGTAAAACACACTGGTGAGAAAC
CCAACATGTGTGGTAAGTGTGGGTACAGAACTGCTCATAAGTCTCACTTA
TCCATACACATGAGAACTCATACAGGAGATAAACCCTACAAGTGTGACCA
GTGTGACTATTCTGCAGCACAGAAATCGACTTTGGACCAACATCGAGTGA
TACACACTGGTGAGAAACCCTACATGTGTGGGGAGTGTGGGTACAGGACA
GTTAGGAAGTTTAACTTATCCGTGCACATGAGAACTCATACTGGAGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0001671 | genome | Sc0001671:1971..3506 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL77539_cuf0 |
| Biotype | protein_coding |
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