transcript:BL73553_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL73553_cuf0
Unique Nametranscript:BL73553_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL73553_cuf0

>transcript:BL73553_cuf0-protein ID=transcript:BL73553_cuf0-protein|Name=transcript:BL73553_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=179bp
ANLQAASRPNKRSTWDTPQEKGVGASALATRPRKRRVDKAEGGPRLKLPR
KRTNGVTESEHGNGEEVSGVLLGQKRCRIVQLGANPQSRKHTRRATDSLQ
TALDTKHCKQSKLKIASGVSSLDCQGKEQEDTESHDNVGIGEAVSPERRE
THRETSAIESTANANVSTGDFGECSQSKS
Run BLAST on NCBI

mRNA from alignment at Sc0000119:50743..51281+

Legend: CDSpolypeptideexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL73553_cuf0 ID=transcript:BL73553_cuf0|Name=transcript:BL73553_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=539bp|location=Sequence derived from alignment at Sc0000119:50743..51281+ (Branchiostoma lanceolatum)
GCCAATCTTCAGGCAGCCAGTCGGCCCAACAAAAGATCTACGTGGGACAC
TCCTCAGGAGAAAGGCGTCGGAGCTTCAGCTCTCGCTACAAGGCCCAGGA
AGAGGAGAGTTGACAAAGCTGAGGGTGGTCCCAGACTGAAGCTACCAAGA
AAGAGGACGAATGGTGTGACGGAATCTGAACACGGGAATGGGGAAGAAGT
TAGTGGTGTCCTCCTAGGTCAGAAGAGGTGTCGAATCGTCCAACTTGGAG
CCAATCCTCAATCTCGTAAACATACCAGACGGGCCACAGACTCGCTGCAA
ACCGCTCTTGATACGAAGCACTGCAAACAGTCCAAGTTGAAGATAGCCAG
TGGTGTTTCGTCACTAGATTGCCAAGGAAAGGAGCAAGAAGATACGGAAA
GCCATGACAATGTAGGGATCGGTGAGGCTGTATCGCCAGAAAGGCGGGAG
ACTCATCGAGAGACGAGTGCAATCGAATCGACGGCTAATGCAAACGTTTC
AACGGGAGACTTTGGCGAGTGTTCTCAATCAAAGTCTAG

Coding sequence (CDS) from alignment at Sc0000119:50743..51281+

>transcript:BL73553_cuf0 ID=transcript:BL73553_cuf0|Name=transcript:BL73553_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=537bp|location=Sequence derived from alignment at Sc0000119:50743..51281+ (Branchiostoma lanceolatum)
GCCAATCTTCAGGCAGCCAGTCGGCCCAACAAAAGATCTACGTGGGACAC
TCCTCAGGAGAAAGGCGTCGGAGCTTCAGCTCTCGCTACAAGGCCCAGGA
AGAGGAGAGTTGACAAAGCTGAGGGTGGTCCCAGACTGAAGCTACCAAGA
AAGAGGACGAATGGTGTGACGGAATCTGAACACGGGAATGGGGAAGAAGT
TAGTGGTGTCCTCCTAGGTCAGAAGAGGTGTCGAATCGTCCAACTTGGAG
CCAATCCTCAATCTCGTAAACATACCAGACGGGCCACAGACTCGCTGCAA
ACCGCTCTTGATACGAAGCACTGCAAACAGTCCAAGTTGAAGATAGCCAG
TGGTGTTTCGTCACTAGATTGCCAAGGAAAGGAGCAAGAAGATACGGAAA
GCCATGACAATGTAGGGATCGGTGAGGCTGTATCGCCAGAAAGGCGGGAG
ACTCATCGAGAGACGAGTGCAATCGAATCGACGGCTAATGCAAACGTTTC
AACGGGAGACTTTGGCGAGTGTTCTCAATCAAAGTCT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL73553gene:BL73553Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL73553_cuf0-E1BL73553_cuf0-E1-1564476830-321272Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL73553_cuf0transcript:BL73553_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000119genomeSc0000119:50743..51281 +
Properties
Property NameValue
Transcript idBL73553_cuf0
Biotypeprotein_coding