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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL72916_cuf0 >transcript:BL72916_cuf0-protein ID=transcript:BL72916_cuf0-protein|Name=transcript:BL72916_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=152bp
MVEGVFTILCQDEVTADTIQNEIRQRGRDFARSQDAAALRAASTWASKQF
GWVRSDLQLRVYGQTATWDFHAGSRSNQVVFHFPENKPVWERRGRWVCTY
NGIIKSLKILSKILGICGPIVLAFPPLSPWLGVGIGAAAIVTYAMSEMME
EI Run BLAST on NCBI mRNA from alignment at Sc0000008:2105857..2107588+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL72916_cuf0 ID=transcript:BL72916_cuf0|Name=transcript:BL72916_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1732bp|location=Sequence derived from alignment at Sc0000008:2105857..2107588+ (Branchiostoma lanceolatum)
ATATCGTCATTTCACGTGCCGTATACTTATACATTGCTTGTTCTAATGTC
CAAACATTCTTTGATGTATAAACCTATCTGTACCCAGTAAGGATTATCAC
CTCCTAGTATGTAATTGAATCTATCAACAGAACGGAGTGCATTGAACGCA
CTTGAACAAGCGGAGATAAAGGTGAATAGCTTTGAGCGTTTATCCTCATA
TCTTGAGCAATCCATGATATGATGTTTCACTTTCAAAGACTAAGTACTAT
CCCTACCTCGAAATATTGCATGCGGCCCTGCCTTTGATCTTTTTCGCAAT
AGCATCGTTTGGCTGACATCAGTATGAGTCGCTCTCTTATACTTAAAGAT
TTCTCATCTTCATTTGATGATTTAGCAGTTTACTTTTTTCATCGCAGCTA
GGTTCACGCATCTGTGGAATAGGCGATCGTACCTGGATCCGAAGTTTTGA
CCTGGCAAGCCGTGTATCGTTATTCTGCAGGTTAGTTTTTGCATTTTCTT
TGTATGAATTAATTCATTTATTTTCTCAAAACACAAGTCATGTAAATATC
ACATTCTGACCTCAGTGCTGTTTGTTCTTAACTTATACACTGAGTGAAAG
TAGTACAATTAGAAAGTAGCAACAGAAACATGGTCGAACGTACTTTGTTT
TGTCCTCAACATTGTGTGTGTGTGCGATTGTGTGCATGTGTCTGTCTCTA
TGTGTATCTCTCTCTCTCTCACACACTTTAGGCCATGGTGGAAGGTGTAT
TCACGATTCTATGTCAGGATGAGGTCACGGCTGACACAATACAAAATGAA
ATAAGGCAGCGAGGAAGAGACTTCGCGAGGTCGCAGGATGCAGCCGCTCT
GAGGGCAGCCAGTACATGGGCCAGCAAGCAGTTTGGCTGGGTGCGAAGCG
ACCTGCAGCTCAGAGTCTACGGACAAACCGCAACCTGGGACTTCCACGCT
GGGAGTCGTTCAAACCAGGTCGTCTTCCACTTTCCCGAGAATAAGCCTGT
ATGGGAGAGGAGGGGACGATGGGTTTGCACATATAACGGCATTATAAAGT
CCCTGAAGATACTGAGCAAGATTTTGGGCATATGTGGCCCTATAGTCCTT
GCATTCCCACCTTTATCGCCGTGGCTCGGTGTTGGAATAGGTGCTGCTGC
TATTGTCACGTATGCCATGTCTGAAATGATGGAGGAAATTTGATCTGTGC
TTTACACCGACATATAGCCATGTGCCATCGCAAAATGCCGCTCTTACGTC
AGAAAATTTATGATAACTGAGGAATACATGCCATTGTCACGCGAGATTTT
GCTTGCTTAAACACAAGTATGTTAACTGAGTGCGTCTTGGGACACGCCAA
TGCCGACCTCTAGGCGGCACTAGGCACTTCAACTATTCAAGACATAACAC
ACCGTGGAGTTTCTTTAGCTACGAACGTTGACAATACAAAACCCTTTTTG
TCTCCCCTATATCTATTGGAGTATGTATATAACACAAAATCCATGTATAA
ATATAACTTACTTAGTGCCTTATTTTCAATCTGTTCGTGCAAGCTATTTT
AAATTCGTAATATTGTAGTTAATGTTTTAATATGTGACTTTTACAAAACA
TGAGCCCCTTTGTAAATGATGACGCACTTCATGTACATATTTCTATGACA
TTATGATTATTGATGCGTTAAAACCCGACTTTGATTTGTAAAAGTTTGAT
GTTTCTATTCAGATATTCTTTATGTCGACTTG Coding sequence (CDS) from alignment at Sc0000008:2105857..2107588+ >transcript:BL72916_cuf0 ID=transcript:BL72916_cuf0|Name=transcript:BL72916_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=459bp|location=Sequence derived from alignment at Sc0000008:2105857..2107588+ (Branchiostoma lanceolatum)
ATGGTGGAAGGTGTATTCACGATTCTATGTCAGGATGAGGTCACGGCTGA
CACAATACAAAATGAAATAAGGCAGCGAGGAAGAGACTTCGCGAGGTCGC
AGGATGCAGCCGCTCTGAGGGCAGCCAGTACATGGGCCAGCAAGCAGTTT
GGCTGGGTGCGAAGCGACCTGCAGCTCAGAGTCTACGGACAAACCGCAAC
CTGGGACTTCCACGCTGGGAGTCGTTCAAACCAGGTCGTCTTCCACTTTC
CCGAGAATAAGCCTGTATGGGAGAGGAGGGGACGATGGGTTTGCACATAT
AACGGCATTATAAAGTCCCTGAAGATACTGAGCAAGATTTTGGGCATATG
TGGCCCTATAGTCCTTGCATTCCCACCTTTATCGCCGTGGCTCGGTGTTG
GAATAGGTGCTGCTGCTATTGTCACGTATGCCATGTCTGAAATGATGGAG
GAAATTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000008 | genome | Sc0000008:2105857..2107588 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL72916_cuf0 |
| Biotype | protein_coding |
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