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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL72895_cuf1 >transcript:BL72895_cuf1-protein ID=transcript:BL72895_cuf1-protein|Name=transcript:BL72895_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=147bp
MSQKRPMVFSPRSPNPCRSPFQLKKLSKKSLFSDSPKSTTHQVGCELCGI
PSCQQPGQQTSYACENCGHYNEAEPAHAHHTGCLCSKCREESLDKCADSD
VKKSLVGLNCTPEHRWVQGVRQHHKVDEGKLNPLSRMGLSASFEFNV Run BLAST on NCBI mRNA from alignment at Sc0000004:3979662..3983094- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL72895_cuf1 ID=transcript:BL72895_cuf1|Name=transcript:BL72895_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=3433bp|location=Sequence derived from alignment at Sc0000004:3979662..3983094- (Branchiostoma lanceolatum)
GACCATGATATGCTGTATGGAAGGGGCAGGTTTTTTAATTGGGGCACGCC
AATTGGGAGTTATGGTACCGTAGTTGGGGCACACGTACACAATTATTATA
TTATTTGATAATTGATAAGGCTTATCTGAAATTGACAATTCAGTATAACG
TTAGTTCAATCAAGTCCTTGGTTCAATGTACATATTCTGTTGCTACTTCT
ATCTTATAAAGGCTGATTACAAGTATATATGCCCACAACTCCTTTGAGGG
TGACACATTTGTTGCTCATAAAAACTATAGATCTGTGGTTACTGATTAGT
AGCAGCGGCATATACAGACCACTGCAGTATCAGAATACAGTAAATGTAAC
CATGAATGATGGTGATTATGATTGACTAATAGCTGTACTTTCTTGTCCTC
AAGCAGCAGGGACTGGCTTTATACAGTTCAAATGCCAGGGCTCTCCCCAC
ACTAACACCAGTACCTGTTTGTCACAACAAGGCTGTCTACAAGGGGGAAT
AACTTGTCAGGTCAGTACAAGTTGTCATCATTTGAGCTGGGAAAAATTGA
ACAATGAAACAACAGAAATCATGTTGAAATTAGACCAAGAAGGTTTAGAA
TGAAATAGCACACTTTTTCACTGCTTTGTTTCATGGGATAGTTTTTTAGA
TTTCAATTATCCTTTGTAAAAAGAGCAACCTTTGCAATTTGCTTTCAATT
GCTCCATGAGTTGTATTGCAATTAACTTATAAGGATGATAGGTCTAGCCT
CCAGTGCATTTAGATATAGAATTGGTTGCCTTTGAGTTTGACCTGTAGTC
AATGCAAAGAGTTTATATTCCTTGTAGTGTTGTACATCTGTATTGATGAA
TACAAATACTATGAGTGACTAGAAATACTTCTGCAGTGTGAAACAATGGT
ATACAATCACTAGAAATACTACTGCAGCATGAAACAAATGTTATTTTGCT
ACACAATACATGTATGTCAAGTAACATTGAACTTTTTATTATATTACAGA
ATGAGTCAGAAGAGGCCCATGGTGTTTTCTCCAAGATCGCCTAATCCATG
TCGGTCTCCATTTCAACTAAAGAAACTGTCGAAGAAATCTTTATTTTCTG
ATTCACCAAAGTCAACAACTCATCAGGTTGGATGTGAATTGTGTGGTATT
CCTTCCTGTCAACAACCAGGACAACAGACTTCATACGCGTGTGAAAATTG
TGGGCATTACAATGAAGCTGAACCGGCACACGCCCACCATACTGGCTGTC
TGTGTTCCAAATGTAGAGAGGAGAGCTTGGACAAGTGTGCTGACAGTGAT
GTTAAGAAGTCACTTGTAGGACTGAACTGTACTCCTGAACACAGATGGGT
TCAAGGGGTCCGACAGCACCACAAGGTCGATGAGGGCAAATTGAATCCTT
TATCCAGGATGGGGCTATCTGCCTCATTTGAATTCAATGTGTAAGCCCTG
TATCATATAAATTCTCTTGTGCTGTCCCATTGAATACCATGACTTGTTCT
TCAAATGTATTTAAAGGANAGAAATTCTCTTGTGCTGTCCCATTGAATAC
CATGACTTGTTCTTCAAATGTATTTAAAGGAGCACTCAAGTTCAGAAAGA
AAATGTTATGTTCCTTTAGATACCACCAGTTATTTTTTCTAATTAAAAGA
TTACATTATATTGACAATTTGACCTAGGACCAGCTGCAGTAATATTCACA
CAGCAGTAATGTTCTCATAAACCAGGGAACCGTTTTAATGGTCCCTGGTT
GGAGGGCAGACTAATTTGCAGCAGAGGAGTGTAAGAATCTTATCCTAAAT
CAAATCACACAAAAAACTCAAACTTTTATGAGTAAGCGCTTGAGCTACAA
TTTGTTAGGAATGCTTGTTGAACATTCAGGCACACATGTTAACATGCCTT
ACCCCTATTGCTGACATTACAGTGTGTCAAAGACACTTTGAGTTTTCAAA
GCCAATGTACTAAGATGTGTGCTTGATAGATGAACACACCATGTATATGT
GTAAGATTGCATATTATCTAAACAGGTTTGTTTTGTTCATAACTGATGTG
TGGTTAGCAAATGCCTCTTGTCTAATCTGAAGAAGCTATTATGGTATATA
ATGATTCTTGAACTGGAAGTTCTTGTATATTAGGGTATCTTTTTGTGCTA
CCAGTACTGTTAGATAGAAAAAAAGAAACAAGTCGGGATATAACAACAAA
CTATATTGAAAGAAAATGCAACGGTTGGACATTAGCCAGACGTCTTAACA
GTTGTACACACATACTGCTTTAGATCAGTTTTACAGCACTGTAAGCCTTT
GATTAAAAATGTATTAGCAAGAGGTTATATGCCCTTCCTTGTAACCCTCA
AACTTCTTTGTTAACTACAATGTAGGCTGACTTAATGAATTAATGAAGTA
TGAGTCATTTTGCTCCCTTTTTTATGGACAATTCAGTCAGCCTCTATAAA
AAAACAACAACTACAAACTCTACAAACAATAAATGAACCTTTTTAGATTG
ACGGAAAATTATCCTTCCACTTGTACCAGTATTCAGGATGCAGTTATTTA
ATGTGTGTATATTGTGGTATTCAATTCAAGAAATACATTGTATTTCAGCT
TTATATGATGACTAAGTGATGTTGAGACAAAGCCGTGATACCTCAGTGCA
ATGAAGCAGNTGATTCTTGAACTGGAAGTTCTTGTATATTAAGGTATCTT
TTTGTGCTACCAGTACTGTTAGATAGAAAAAAAGAAACAAGTCGGGATAT
AACAACAAACTATATTGAAAGAAAATGCAACGGTTGGACATTAGCCAGAC
GTCTTAACAGTTGTACACACATACTGCTTTAGATCAGTTTTACAGCACTG
TAAGCCTTTGATTAAAAATGTATTAGCAAGAGGTTATATGCCCTTCCTTG
TAACCCTCAAACTTCTTTGTTAACTACAATGTAGGCTGACTTAATGAAGT
AATGAAGTATGAGTCATTTTGCTCCTTTTTTTATGGACAATTCAGTCAGC
CTCTATAAAAAAACAACAACTACAAACTCTACAAACAATAAATGAACCTT
TTTAGATTGACGGAAAATTATCCTTCCACTTGTACCAGTATTCAGGATGC
AGTTATTTAATGTGTGTATATTGTGGTATTCAATTCAAGAAATACATTGT
ATTTCAGCTTTATATGATGACTAAGTGATGTTGAGACAAAGCCGTGATAC
CTCAGTGCAATGAAGCAGGCTGCTGTATGTTAATTGCAAATATATTTGTA
ATAGAAAGCATGTCATACACCAAAAGTATTGTGAACAATTGTTGTGCTTG
ATAGAGCAGCCAAAATTCAGGTTTCTTTAAACTTAAAGAGCTGGAAACGG
TTATGTATATTTGCAAAGGTGTGTACTATTCCTTGCAAATAAATGATTAC
TGTTCCACAATTGTTCACTGCCCTCTATTATTG Coding sequence (CDS) from alignment at Sc0000004:3979662..3983094- >transcript:BL72895_cuf1 ID=transcript:BL72895_cuf1|Name=transcript:BL72895_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=444bp|location=Sequence derived from alignment at Sc0000004:3979662..3983094- (Branchiostoma lanceolatum)
ATGAGTCAGAAGAGGCCCATGGTGTTTTCTCCAAGATCGCCTAATCCATG
TCGGTCTCCATTTCAACTAAAGAAACTGTCGAAGAAATCTTTATTTTCTG
ATTCACCAAAGTCAACAACTCATCAGGTTGGATGTGAATTGTGTGGTATT
CCTTCCTGTCAACAACCAGGACAACAGACTTCATACGCGTGTGAAAATTG
TGGGCATTACAATGAAGCTGAACCGGCACACGCCCACCATACTGGCTGTC
TGTGTTCCAAATGTAGAGAGGAGAGCTTGGACAAGTGTGCTGACAGTGAT
GTTAAGAAGTCACTTGTAGGACTGAACTGTACTCCTGAACACAGATGGGT
TCAAGGGGTCCGACAGCACCACAAGGTCGATGAGGGCAAATTGAATCCTT
TATCCAGGATGGGGCTATCTGCCTCATTTGAATTCAATGTGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000004 | genome | Sc0000004:3979662..3983094 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL72895_cuf1 |
| Biotype | protein_coding |
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