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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL69003_cuf0 >transcript:BL69003_cuf0-protein ID=transcript:BL69003_cuf0-protein|Name=transcript:BL69003_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=252bp
MFAARGALAGTRAARERRRKISELRDRERRRRQRRLRSVIIQEGTVKICS
LPTVCILLGVLACGAGTVMSMVSYDFLQVDFLMTNKNRSNITQNDDQESA
EDFDRVRRIQEAFFPDVGYSDNVHILGRGTNYPPQFRLVGPLLIGGGIFI
VLCGITALLENRDGETVRAPLIVLEPAPEQPRRPSANFDLLMSNSCPNFR
YLPEPVSVNQQRGYLKYPPSPAPLRSSCPQRDSVLRAPAGLDLGKSQHLN
VF Run BLAST on NCBI mRNA from alignment at Sc0000086:34330..36025- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL69003_cuf0 ID=transcript:BL69003_cuf0|Name=transcript:BL69003_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1696bp|location=Sequence derived from alignment at Sc0000086:34330..36025- (Branchiostoma lanceolatum)
GCCTTATCCAGCGACGCGTGCGATGCATCAATGGATGTAGTTCTCTCACG
TTGTTGTTGTTATCGCCTAGCGTGCGCGATACGGCAGCACGTAGTGTCTT
CAGAATTCAGAGAGAGTCGCGGCAGCAGAGCAGTCATCAGGTAGGATGTT
CGCCGCCCGTGGCGCTCTAGCAGGCACGCGAGCAGCAAGGGAGAGGCGAC
GAAAGATTAGCGAGTTACGTGACCGGGAGAGGCGACGGAGACAGAGAAGA
CTCAGGTCTGTTATCATTCAGGAAGGTACAGTTAAGATCTGTTCTCTACC
GACAGTTTGCATACTGTTGGGAGTGTTAGCGTGCGGAGCAGGAACGGTGA
TGTCTATGGTTAGTTACGACTTCTTACAAGTGGACTTTCTGATGACAAAC
AAGAACCGCAGCAACATCACGCAGAATGACGACCAGGAATCGGCGGAGGA
TTTCGACCGGGTTCGCCGAATACAAGAGGCCTTCTTCCCAGATGTAGGTT
ACTCCGATAACGTCCACATCCTCGGCCGGGGAACAAATTATCCACCCCAA
TTTCGACTGGTCGGTCCTCTTCTAATCGGCGGGGGGATCTTTATAGTTCT
GTGCGGAATAACAGCGCTGCTGGAAAACAGGGATGGCGAAACGGTACGCG
CCCCGCTGATTGTGCTGGAGCCTGCGCCCGAGCAGCCAAGACGTCCGTCC
GCGAACTTTGATCTGCTTATGTCGAATTCGTGTCCGAATTTCAGATACCT
TCCCGAGCCTGTGAGCGTGAATCAACAACGTGGGTACCTGAAATATCCAC
CCTCGCCCGCGCCCCTTCGCTCCTCCTGCCCCCAAAGGGATTCAGTGCTT
AGAGCGCCCGCAGGGCTTGATCTCGGGAAATCTCAACATCTCAACGTATT
CTAGATTGGGTTCCTCACTACGTACTCAAATAAATAGCGCCCAGGGACCC
GCGAAAACACTCAGATTTGCCAGAATTGTGTTCCTGCGATCGTTAGAGAT
CACATTTGTCGTGTGTAGCATGTTAAAGAGAGCTCTTCGGTGTGACGCGC
GGTCACTGTTCCACATATCTTTGTTGGCAATGTTACAGATTGTACTGAAA
TGATTGTTGGTAATGTTATTTGCAAATGCGAAATGTAAAAGAAGAATAAG
AAGTATCAGTCATTTCTGGTGATTAAATATCGCCTTTATGTGTTACATAG
TACCAGCGTATTGGACTAGTAATTTATGAATAGTAACCTGAGAAAACTGC
AAAAATCTAATCATGAAATTAGAAATTAGACACATGCCGTTATGTTCTTG
TTGCACGCCGTGTTTTGTGTGCTATTTCGTGAGCTGTTTTTTGATTGTAT
ATTTTCAATATTTTAAATGCGACATTCCAGGTTAAGGCAACATACATGCA
TAAGTATTTTTGCGAGCAATACTATTCCGTGTACGAGTATTTCAATATAA
AATTGTCCACGGATATGAACTATTGCACAGTTTTTGTAGAATACTAGTTC
TGTATGTCTGGATCTAGATTAAATTTCTCTTGTTTTCTGCATACAAGATC
ATTTCCTTTTATCACCGTGCCCCTGGAGCCAAAAAATATACACTTTGTTG
TAAACACAATTAAACTGTTACTTATATTTGAGTACGTTAATAACTTGCAA
TTAGCCTTCGGGCATGAATTTGCAATAAGGTTATTATTAAAGTGCG Coding sequence (CDS) from alignment at Sc0000086:34330..36025- >transcript:BL69003_cuf0 ID=transcript:BL69003_cuf0|Name=transcript:BL69003_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=759bp|location=Sequence derived from alignment at Sc0000086:34330..36025- (Branchiostoma lanceolatum)
ATGTTCGCCGCCCGTGGCGCTCTAGCAGGCACGCGAGCAGCAAGGGAGAG
GCGACGAAAGATTAGCGAGTTACGTGACCGGGAGAGGCGACGGAGACAGA
GAAGACTCAGGTCTGTTATCATTCAGGAAGGTACAGTTAAGATCTGTTCT
CTACCGACAGTTTGCATACTGTTGGGAGTGTTAGCGTGCGGAGCAGGAAC
GGTGATGTCTATGGTTAGTTACGACTTCTTACAAGTGGACTTTCTGATGA
CAAACAAGAACCGCAGCAACATCACGCAGAATGACGACCAGGAATCGGCG
GAGGATTTCGACCGGGTTCGCCGAATACAAGAGGCCTTCTTCCCAGATGT
AGGTTACTCCGATAACGTCCACATCCTCGGCCGGGGAACAAATTATCCAC
CCCAATTTCGACTGGTCGGTCCTCTTCTAATCGGCGGGGGGATCTTTATA
GTTCTGTGCGGAATAACAGCGCTGCTGGAAAACAGGGATGGCGAAACGGT
ACGCGCCCCGCTGATTGTGCTGGAGCCTGCGCCCGAGCAGCCAAGACGTC
CGTCCGCGAACTTTGATCTGCTTATGTCGAATTCGTGTCCGAATTTCAGA
TACCTTCCCGAGCCTGTGAGCGTGAATCAACAACGTGGGTACCTGAAATA
TCCACCCTCGCCCGCGCCCCTTCGCTCCTCCTGCCCCCAAAGGGATTCAG
TGCTTAGAGCGCCCGCAGGGCTTGATCTCGGGAAATCTCAACATCTCAAC
GTATTCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000086 | genome | Sc0000086:34330..36025 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL69003_cuf0 |
| Biotype | protein_coding |
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