|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL14212_evm0 >transcript:BL14212_evm0-protein ID=transcript:BL14212_evm0-protein|Name=transcript:BL14212_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=282bp
MNKQKESMDSELKVTLENCEQVEKEIQQHFTMLRSKLEKEEKEMITQIEV
TSPQGKITLIQTTQHTGPPLTAGKAKGVRRVWGAEWRPQESGKHTLGVCM
EDKSSLDVEVASNNPILRFGKEGSQQERFNKPVDVAVREDRLYVADSWNQ
RVQVFDLNGKFCSAFSVPGPATALAIQTDGNIFVKSGSEVMKFSSSGEQL
HKFPLSQHCTKPYGLALQRDGKVVVADHGKRSIFLFEANGKLVREVGGQV
DGKFDKPCFVCVDKEDNIIVSDEGNDCVVSGV Run BLAST on NCBI mRNA from alignment at Sc0000018:914189..915758- Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL14212_evm0 ID=transcript:BL14212_evm0|Name=transcript:BL14212_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=1570bp|location=Sequence derived from alignment at Sc0000018:914189..915758- (Branchiostoma lanceolatum)
ATGAACAAGCAAAAGGAAAGCATGGACAGTGAACTCAAGGTCACACTAGA
GAACTGTGAGCAGGTAGAGAAAGAAATCCAACAGCACTTCACAATGTTGA
GGTCAAAACTAGAGAAGGAAGAGAAGGAGATGATCACCCAGGTACAGAAG
ATTAAGAAGGCCGGCGAAAATCAAGTAGAAGATCACAAGGGAAAACTGAA
AAACACTAAAGAAGCACTTTCATTCTGTAGAAAGGTCTTAGATCGTGATT
TCAACACAGAACTTTTGTATCTAAGGCAACTAATGGAGGAAAGGCTTAAG
CAGCTGGCCTCAGAGAAAACAGGTGACAGACCTAAGACTGTGTCTTTCCA
ACCCTCAGATCTATCTTAGATTTCAGGGGGTTCCTTGTCAGCGTTTGCAG
GGTTCACTATCAACATTGAAGAACAGGTAGTAGAGAGTTTGTCCTGCTCT
ATCATAGTCATATCTGATATTGGAGATCTCACAGATGGGAATGTTGCACC
ACAGATAGAGGTGACCTCCCCCCAGGGCAAAATCACCCTAATACAGACAA
CACAACATACTGGTCCTCCACTAACTGCAGGGAAGGCAAAGGGAGTTAGG
AGGGTATGGGGTGCAGAGTGGAGACCTCAGGAGTCAGGAAAACACACACT
GGGGGTCTGTATGGAAGACAAGAGTTCTCTCGATGTAGAGGTGGCTAGTA
ACAACCCTATACTGAGGTTTGGGAAGGAGGGTAGCCAGCAGGAGAGGTTT
AACAAACCTGTAGATGTAGCAGTCAGAGAGGACAGGCTGTATGTGGCTGA
TTCTTGGAACCAGCGTGTGCAGGTGTTTGATCTGAATGGAAAGTTTTGCT
CCGCATTTTCAGTACCTGGACCTGCCACTGCACTTGCAATTCAGACAGAT
GGCAACATATTTGTGAAGTCTGGGTCAGAAGTGATGAAATTCTCATCATC
AGGAGAACAGCTGCACAAATTTCCTCTGAGTCAACACTGCACAAAACCGT
ATGGCCTGGCATTACAGAGGGATGGGAAGGTAGTTGTAGCTGATCATGGC
AAACGCAGTATCTTCCTGTTTGAGGCAAATGGGAAACTAGTGAGAGAGGT
CGGAGGTCAGGTGGATGGGAAGTTTGACAAGCCATGTTTTGTCTGTGTGG
ATAAAGAAGACAACATCATTGTGTCCGATGAAGGCAATGATTGTGTTGTG
TCAGGTGTTTGACAAGAATTTGAAGTTCAAACATAAGTTTGGTCAGGGGG
GTAGACAGCCACAGGACATGTGGTCTCCCATGGGGATGTCAGCTGACAGC
AGGGGGAACATAGTTCTGGCAAACTTTGGGGGTACAATTGGTGGTATTGG
ACATAGTGAGAAGCTTCAGGTGTTCTGCCCAGATGGCACCTGGGTCTCCA
CCATTAGCAGTGATGGGGACAAACTGAACCATCCGCACGGGGTGGCTGTG
ACAGAGGATGGACATGTGTTTGTAGCTGATACTAGAGACCACTGTATCAG
GAAGTACAGATATATGTAACAGTACAGAATGCCCTGGGTACAGGGGCTGT
CATTCCTTTATAAGTCACTC Coding sequence (CDS) from alignment at Sc0000018:914189..915758- >transcript:BL14212_evm0 ID=transcript:BL14212_evm0|Name=transcript:BL14212_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=1698bp|location=Sequence derived from alignment at Sc0000018:914189..915758- (Branchiostoma lanceolatum)
ATGAACAAGCAAAAGGAAAGCATGGACAGTGAACTCAAGGTCACACTAGA
GAACTGTGAGCAGGTAGAGAAAGAAATCCAACAGCACTTCACAATGTTGA
GGTCAAAACTAGAGAAGGAAGAGAAGGAGATGATCACCCAGATAGAGGTG
ACCTCCCCCCAGGGCAAAATCACCCTAATACAGACAACACAACATACTGG
TCCTCCACTAACTGCAGGGAAGGCAAAGGGAGTTAGGAGGGTATGGGGTG
CAGAGTGGAGACCTCAGGAGTCAGGAAAACACACACTGGGGGTCTGTATG
GAAGACAAGAGTTCTCTCGATGTAGAGGTGGCTAGTAACAACCCTATACT
GAGGTTTGGGAAGGAGGGTAGCCAGCAGGAGAGGTTTAACAAACCTGTAG
ATGTAGCAGTCAGAGAGGACAGGCTGTATGTGGCTGATTCTTGGAACCAG
CGTGTGCAGGTGTTTGATCTGAATGGAAAGTTTTGCTCCGCATTTTCAGT
ACCTGGACCTGCCACTGCACTTGCAATTCAGACAGATGGCAACATATTTG
TGAAGTCTGGGTCAGAAGTGATGAAATTCTCATCATCAGGAGAACAGCTG
CACAAATTTCCTCTGAGTCAACACTGCACAAAACCGTATGGCCTGGCATT
ACAGAGGGATGGGAAGGTAGTTGTAGCTGATCATGGCAAACGCAGTATCT
TCCTGTTTGAGGCAAATGGGAAACTAGTGAGAGAGGTCGGAGGTCAGGTG
GATGGGAAGTTTGACAAGCCATGTTTTGTCTGTGTGGATAAAGAAGACAA
CATCATTGTGTCCGATGAAGGCAATGATTGTGTTGTGTCAGGTGTTTGAA
TGAACAAGCAAAAGGAAAGCATGGACAGTGAACTCAAGGTCACACTAGAG
AACTGTGAGCAGGTAGAGAAAGAAATCCAACAGCACTTCACAATGTTGAG
GTCAAAACTAGAGAAGGAAGAGAAGGAGATGATCACCCAGATAGAGGTGA
CCTCCCCCCAGGGCAAAATCACCCTAATACAGACAACACAACATACTGGT
CCTCCACTAACTGCAGGGAAGGCAAAGGGAGTTAGGAGGGTATGGGGTGC
AGAGTGGAGACCTCAGGAGTCAGGAAAACACACACTGGGGGTCTGTATGG
AAGACAAGAGTTCTCTCGATGTAGAGGTGGCTAGTAACAACCCTATACTG
AGGTTTGGGAAGGAGGGTAGCCAGCAGGAGAGGTTTAACAAACCTGTAGA
TGTAGCAGTCAGAGAGGACAGGCTGTATGTGGCTGATTCTTGGAACCAGC
GTGTGCAGGTGTTTGATCTGAATGGAAAGTTTTGCTCCGCATTTTCAGTA
CCTGGACCTGCCACTGCACTTGCAATTCAGACAGATGGCAACATATTTGT
GAAGTCTGGGTCAGAAGTGATGAAATTCTCATCATCAGGAGAACAGCTGC
ACAAATTTCCTCTGAGTCAACACTGCACAAAACCGTATGGCCTGGCATTA
CAGAGGGATGGGAAGGTAGTTGTAGCTGATCATGGCAAACGCAGTATCTT
CCTGTTTGAGGCAAATGGGAAACTAGTGAGAGAGGTCGGAGGTCAGGTGG
ATGGGAAGTTTGACAAGCCATGTTTTGTCTGTGTGGATAAAGAAGACAAC
ATCATTGTGTCCGATGAAGGCAATGATTGTGTTGTGTCAGGTGTTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000018 | genome | Sc0000018:914189..915758 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL14212_evm0 |
| Biotype | protein_coding |
|
