Blg13986.0 (mRNA) - B. lanceolatum

Overview
NameBlg13986.0
Unique NameBlg13986.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at xpSc0040071:718..2342-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg13986.0 ID=Blg13986.0|Name=Blg13986.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1625bp|location=Sequence derived from alignment at xpSc0040071:718..2342- (Branchiostoma lanceolatum)
AGCACTCAGTAGTAGTTTTGCGTGGTAGGAGTTCAATGGTCCCCCAATTA TCGTTTACACTTCTACCGTGCAAAACATCCACCTAGTGCCACTTGAAAAC CAAGACAACTTGTGTTGATAACTCTCTTTTTGAAGTCGTTCAACCAGGAG ATTGCCAGGTGGGAGATGGAGCAGCCTACCGAGGAACAGTCTCTGTGACC GGAACAGGCAAGACGTGTCAACGCTGGGACAGTCAGACGCCTCATGCGCA CGACAGGACACATGCTAACTACCCATCATCCGGACTGGATCACAGCTACT GCCGGAATCCTGACGGGGATCGCGGAGTTTGGTGCTACACCACGGATCCT AACACTGTATGGGAGTATTGTGACGTCTGTGGTAAGGTCTGATTATGTAA CCTTTACTTTTGTGTTATGATCTCCTTCCATATTTATCAGCTATAACACC TGCTCCTCGACATGTCAATGTTTGCAGGCACATAAATCAATATCCTTTAA GGACTTCATATCTACACATCAATCAATATCCTTTAAAGTATACACATCTA CACATTAACACATCAATCAATACCTTTAAAGTGGAACGTAACGATGTGCG ATATAGATAGGAAGGGCGTTAGGAAAGGATAACGATGCTCAGCTTGGCAT GTTGGTGGGATATGGCATCATTTCCGAGTAAAACAATGGACCTTAAAATA GATGCAGACTCTTCCCAGACCTGTATACTTCATGTTGTCCCATTACTTCA TGTTTACTTCTTAAAAGAATATTAGGTCATCACATTTATGAATAAGCATT GCTTATATGAGCGAGTTTGACCTGTTCCATCGCCGTGTTGTTCTCGCCCT GCGCTGTCCCATTCTTGTGCTGATTTATCCCTGTGCTGTTCCAGCGTGCT ACTGGGAAGGTACAGCTGTGTTCTGCGACCCTGGTGACTGTGACCGGGGC AGCTACGTGCGGAGTGACAAATGTGGAGACGGACTCTGTTGCTGGACGGG CACGAAGATATACTGCTGTGATGGTGAGACATTGTTCCAGTGGAATAATT TGTGATATTCACAAGAAATCAATTCACAATGGTATATACAGACAGAGCGC TAAGCTATGTCAGGTGATATAGTTGAAAGAGATATATAGATGAAGACGGA TAAAGAATCATGTTACCAATGCGTTGTGAAGACAAACCCTCATTAGAAGT ATCATTGTAAAATTCTAACACATTAGCAACGATTTCATTTCTGTTTACTT TGACATTGGTCATTGCATTTACTTGATATCCACAGTTAGCTTAGTAATAC GATATGAATGTGGCTATTCTTCCTGCGGTCCTTTACAGGTGTGTAGAACG GTTTTACCTGGCCGTGCGGCTGACTTAGGTGACGACATTGCGAGGTGTCA GCTCAGTTCGACGACATGTTTGATTTGTTTTTTGGACAAGTCATTCTTAC ACACTAGTTAAATTAATCAAGTAATTAATCAGTATTGAAGTGTGCGACAA TCAGTTGCTAGTCCCACGCAGGGGCGTGTCACATGGCAGGAAGCTAAGCA ATCCGCACAACTTCAGTCAGTTCAAATGTCGTACTTCTCGCTTCATGCCA CTCTACAATGTTGTGTAAAGCTCCT

Coding sequence (CDS) from alignment at xpSc0040071:718..2342-

>Blg13986.0 ID=Blg13986.0|Name=Blg13986.0|organism=Branchiostoma lanceolatum|type=CDS|length=390bp|location=Sequence derived from alignment at xpSc0040071:718..2342- (Branchiostoma lanceolatum)
ATGCGCACGACAGGACACATGCTAACTACCCATCATCCGGACTGGATCAC
AGCTACTGCCGGAATCCTGACGGGGATCGCGGAGTTTGGTGCTACACCAC
GGATCCTAACACTGTATGGGAGTATTGTGACGTCTGTGCGTGCTACTGGG
AAGGTACAGCTGTGTTCTGCGACCCTGGTGACTGTGACCGGGGCAGCTAC
GTGCGGAGTGACAAATGTGGAGACGGACTCTGTTGCTGGACGGGCACGAA
GATATACTGCTGTGATGGTGTGTAGAACGGTTTTACCTGGCCGTGCGGCT
GACTTAGGTGACGACATTGCGAGGTGTCAGCTCAGTTCGACGACATGTTT
GATTTGTTTTTTGGACAAGTCATTCTTACACACTAGTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg13986.0Blg13986.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg13986.0-exon-xpSc0040071-1570713199:1962..2342Blg13986.0-exon-xpSc0040071-1570713199:1962..2342Branchiostoma lanceolatumexon
Blg13986.0-exon-xpSc0040071-1570713199:1320..1448Blg13986.0-exon-xpSc0040071-1570713199:1320..1448Branchiostoma lanceolatumexon
Blg13986.0-exon-xpSc0040071-1570713199:718..1004Blg13986.0-exon-xpSc0040071-1570713199:718..1004Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
xpSc0040071genomexpSc0040071:718..2342 -
Properties
Property NameValue
GeneIDBlg13986