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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000087:209009..215518- Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg03349.1 ID=Blg03349.1|Name=Blg03349.1|organism=Branchiostoma lanceolatum|type=mRNA|length=6510bp|location=Sequence derived from alignment at Sc0000087:209009..215518- (Branchiostoma lanceolatum)
ATGCGTGGCGTGACCGTGCTTGTCGGTACGGGACCTGCGACAATGGCACC
TGTTTGTGTTACCGCGGCTGGACCGGTCTGTACTGTCAGGACGGTATGTT
TCTCTTCGCCTCTGCCTTAACAAAAAAGCCCACGCTTTCACTGCTGTTGG
CTGTCTGGACTTTGGTACATGATTAGCGCAATTAAGAGACAATGTTGCCA
GTCTATCTTAAAAGTCAAGAGTTGATAGCTTATCCATACATTCACATTCA
TATGGAACTTAGGTTTTGCAACTCAAATGGACGACGCTGCTATTTGTGTT
GCCTCTTCCACTGACATGAACGATGACGACGTTCAGAAATTCAAACTCAG
AACATCCTTGAATTAGTTCCATGAGGTTAGTAGATCGCTGGATGACAGAG
TTCTTTGTACACAACCAAGTGCCTGTACCTAGCCAACGTTTTGGGACCAT
CACCAAAACGTCGGCTAGGTACAAGCAAGTGCATTTGATTGTGTACTTTC
CTCGTATTAGCCAAAACTAACAACATACGTTGATGAAGGTTACTAATAGA
CAAAAACCTGGTTTCCCAATCCTATCTTTAGTCACTGACGACAGACAGCG
GATGCTGTCTGAAACGTCTGTTCCAAATTTTATCCGGTTGCTTGAGTAAC
TATTGTTGGCAAGACTGACAACACCTTCTTCTGTGTTCCAAGTTTCAGTA
GACCCAAACACCACGCCTGTTCCAGAGCAGGGTCCCACACCAATCGCCGT
ACCTTTCGCCGCAACCGGTGCCATCGCCGCCAGCAGTGCCGGTATCGTCG
CGGTACTGATCCTAGCAGCGGCCGGCTTCATCTTCGTCCGCCGGTGGAGG
AAGAGGAGGAATGATGATGATGGAGAGACGATATACATCGACGATTTCTT
CCCTTTTGATAGAGAAAGTAAGTGATGAGCTCTTTTCGTCGTATAAACAG
TTTAATTTTCCTGTTCCTTATCATGCAATTTTTCATAGTCTGCATCCTAG
TACGTATATATACTTGATCAACGATTTTAAATCAAAATCAACAAGTGACT
CAGTAGTAGCCTAGATTCCACTCTTGTTAGCTTTAATCCGCTACTCTGCC
AACAGCGGACTAAAGCTAACAAGACTGGACTCAAGGCTACCTCGATACGT
AGATCATGTCCAAAAATTGATCATAACGATGTTTGATGTATATAAAGAGA
AGCAACGGCCACTTGATAAATGCCGTTCGTTTTTTTTCCTTAATTTGAAT
GAAAGTTTATCTAAGGTTGCACTTGACTGAGAAAAATTCTATTCGCTATA
TTCGTACACAAAATAAAGCGCTTTCTAAAAGGCAACTTGAGAAGGATATG
AGAACTCATGAAAGGCTTGTTGGTAAGTGCTTTACTTTCTGAACAGATAT
AGCGTATGAAATCTTTATAATGAATGTAGACCTTTATTGTACATATATAC
CCACTGGGTTCAGTACAGGTTACAACAGAAAACGTCAGAGTTTATAAATA
CATATAACAATAACAATGGTACTAACCAGTCTAATAATTACATGGCTTCT
TCTCGATCCTTAGTAATGGTGTAAATATAGGTACAGATGTGCTTTTTAAT
CAAGGTTTTGTGTTGCTGAGGTGTATAAAATGGGGAGACATATATTACAT
TGATTTATAAAGCTCAGCTTTTAAATAAGCTTTTCTTCTGTGTAGTTCAC
TGGAGAAGGATGCAGGAGCCCCCGCCGGTCCCTCCTCGGCCACAGTTCCC
AGGGTTGGAGGTCGACCCCAGCCGGGTGACCCTGGGTCAGAGGATCGGCA
GCGGGGCCTTCGGCGTCGTTTACGGGGCAGTCTTGAAGCGGGGCAGCGAC
ACAGAGGACGTCGTCGTCAAAACTGTCAGAGGTAAGAAACAGGCACAGAG
TGGGAAAGAGAAAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGGGGGGAGAGAGGGAGA
GAGGGAGAGAGGGAGAGAGAGAGAGAGAGNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGGGGGGGGAGAGAGGGAGAGGGAGAGAGAGAGAGAGAGGGAGAAAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGAGGAGAGAGGGG
GCAGACAGGCTGACGGATTGACAGAGGAGGCAGAGACCAATAATTACTTA
CCTGTCCTGTAAGAACCCAACACACATATGGAGAAGAGTAGGGATGACCC
GATACGCGGCGTGCTTCACTAAAAACCGCATTGCATACTACTAGCTACTG
TAAAAAGCATCATGCTTCACCTCAATTGAGGATAACTGCGTTACCTTGCT
TGAGTAATTATTTTTGGCGTGCGTTACCTTTACCCTTTTTCACGATTTCG
TTTTTTTAAGGCATGTTGACCACTCAGACCACGTCTTCTTACATATGGCA
TCTAATCTCTATATACTAGTACTTAAAGTTAGCTAAGCCACTGTCACATA
GCACGGAAATTGATCGGCTGACGAGTCTGTGAGCTCTAAATGACATTTTT
GGCAGTAAAACGCCCGGTGCCGTTTCTCTCAAAAATCACGCAATCCTTTA
TGGATTGGTCGATGTTCGCAATTCATTGAGCCCAGTTGAATATGATAAGG
TAACGTTGGGTAACATAAATTCACGGGGTACTTAAATTCGGGATTTTTCG
AAAACGGGGTATTTAGGGATATGTGCTAGATGCAACATCAGTAATACCGC
TAGAAATGCAAACTTGACAGACTAACGTATTCAGAACACTGTCTGAAAAG
CTTCGATAACCATGCATTAGAAGTTGGCTACGTCAAAAACTCTCCGTCCC
TTATTGTCACAGTCTGAGGGCTTCGTGGGAGAACTATACTACATAGTTGT
TCGCTGGTTTATAAGACAAATGTCACATCCGCTTCCTGCTCAACACAATT
ATTTACAATACAACTTATTAGAATCTCTTTTGCTAACCTACAACTGGACT
CTAAGTGTGATTAATCATCAAAACGCCTCTTTGTTGCTACAACCAATGGC
TACGGCACTACGGTGAATTTTCCCGCCGCCATATTCGTTACCCAGAATCC
TGCTATTCGGCAGACGACAAACGTTTGCGAGGAACACTTTTTTGTCTAAA
TGTTGTGTGTGATAGTGGACTGATGGCGATATTTTCCTCAAAGTTTGCTC
TTAGCACAAGCAGAAACACATGGACATAGTAGTATTACCATTTCTACGGC
ATCCAGCTAACGCCCCGATGAATAATGTACAAATTTCCATGACGGTGGGG
ATGAACTTTGAGTGACGTTCTACCGACTCAACACACGGGTTGTTCTCGGA
GGCCTGATGTGTGCGGTACGGCCGTTTTTTCGTGTATTTTTTTACTTGGA
CACGTCTATATCCATAGCCACTCTCCTCAAGCCAAGGATGGAACGAATAG
CTGCTGTATAAAATGTAATTAGCGGTAAGATATTCAAGACGAATCTTCTC
TCCCGAATTAATGTTCACCCCTGTCCGACAGCTCCGTCATTGTGCGTGCG
GCGGACGGTAGTTTCAAGTTGAAATATTATGGTGTCAGCACGACTAGAGA
CAAAATCTACCATATATATGATTAGTGCAAAGATAGTACATGATACTGAC
AGAATAATAGAAAAAAAGGATGGTTCATTGTTCTGCTAGATTGATTTCAG
TCAACCATTATCGGAAAAATCCCGAATTTATGTTACCCAACGTTAGATTT
TTAAGCGAAAAATACGCGCGACCCTCTGTTGATTTCAAAAGCAGGTGACC
TTCAATTCTGGCTATCAACAAATACGGCCGAAACTCGTCGACTCTGAAAT
TGGAGCTTTATCACGGTGGCTTTATAGCCTGGTTGTCTATGTTTCAAAAT
TTGCACAACAAGATTCTGTTCTTGCCTTCCCTAGACAACGCCAGTGAAGA
AGACAAGTTGAGTTTCCTGCAGGAAATCCGCGCAGTCGTAGACCTGGGTG
CGAACGACAACCTCCTCGGTCTGGTCGGCTGCTGCACCCTGGTGCGAGAC
CATCTGTATCTCATCACGGAGTTCATGCCGTACGGAGACCTGAAGAGCTT
CTTGATAAGATGCCAAGAGGTCAGTCAAGAGAACGTTTTGCGTCTTCTCT
CGGATTTTGGTTCATTTCCGCGTGAAGTGACAAGTGTAATGCTGGGATCA
CCCGGCCGGGTGGTTTGCGGGAACGAAATGCATGATAAAAAAGACAACAA
AACGTACAAAAAATTAGTCATAAGTGTTTGAAAATGTGACCCTAGCATCA
CACAGTGACTTTTATTTCTACAGGAAGAGACGACCGACAGTCCCTCAGAC
GACATTTACATCTTCCAAGCGCTCCAGATGTACCAGGTGGCCCGACAGAT
CGCAAGAGGCATGGTAAGGCCTGTTATACTTAACATATCAACTCACATCA
GCAAGTCAAGGCCCCTTACGTTTAAGCAATGATGTTACATATACATATAG
TTTCATATTTAAGCCAGTCAAATCATACTTCCCCGTATTTTCAATTGCAA
ATTATATCAGGATGGTGCCAATTCTAATCCTGTGTTGTAGGATGGAATAG
AAGGTTCAGATGAATTTGTTTCTGGCTTTCATTACTATTGTATCGACAAG
GGCTTAAGCAAACGCTAATCCTTACCCTAATCATAAGCATATTAGTATAT
CACTTACTGATGAGACACCTAAAGATGACGCGTTTACGTCTCTGCTGAAT
GTTCTTTAGGATCACATCGCCCGGTCTCGTTACGTCCACGGTGATCTAGC
CGCCCGGAACGTGCTGGTCGGGGAAGACCTGAAGGTGAAGATTTCCGACT
TCGGGCTGGCAGAAGACATCTACAGCCGAGGTTACAATCGGCAGGACCGG
CTGAGGAAGTTGCCATTAAAGTGGATGGCGCCTGAGCGGCTGCAGGATGG
GTCAGTCTACACCGCACAGAGCGACGTGTGAGTAACAATCCCAAAGGCTT
TTGTTTAACTATTTCTAAAGCCACTATCTCACTGCGACCAGCGATTTCAC
AGCGCGCTCAAGAATCTTTTAACGCTTTGTGTGTTTTGTTGTCTTTTGAG
TAATACTTGTACGCTTTGCATAACATTCCCATTATAAAGTCATAGGGTAG
CACAAATCCAACTTTGAACGCAGCGAGGTCGCCTACGTGTCGCGGGTCCA
GTGAGATAAGGGCTCAAAGTCCATATCATATCATCCCATGTATACCAGGC
AAAACTGTAGCATTAAATTTCAAAGGAATGCCAGGATGCACAATCGTAAT
GTTCCATATTTCTAACACACTCCATCCAGTAAGAAAATCAGCTAGCAAAG
AAGAGGGTTTTCTTTCTAATATCTGTTTGAATAATTGTAAAATGCGCATG
CGTTTCGCCACCGAACATCAAGATAAAAATCTAACATGCAATATGTAAGA
CAAAGCCATTCCCTGCTTCGCTAACTATAGCATAACCAATTTCTTGAGCC
CGGCCGTAAGCCGATTCCATATATGACGACTGACATTTACACTCATTCAC
AGGTGGTCTTTCGGCATAGTGCTGTACGAGATAAGTTCGCTAGGGGGCAA
TCCTTTCCCTGACGTGCCACCAGGAGAGCTCAAAGATCGTCTGCAGGCAG
GACACAGAATGGCCAAACCTGAGCGCTGTCCACAAGCCATGTAAGGATTA
TGTTATGATATTACTATCTGATTTATTTGTTTATCTATTCATATTTACCA
CATGTGGAATGATTGACATAACAGCTGGTGACTACCACCTTTTCAAGATG
ATAAGGTGTGAGGTTTGAGATATACGCGTTTGATGACCTCGACGAAAAGG
GTATAGTGCATGTTGCTCAGTAGCTTTGCCTGTGCCTGAAGTAAACTTAT
ATCCAGGAAGTGAGTGGGAAGATGGTGTCACCGCATTTGTCGGACTTTTG
TTAGGGACAGGAAGTAGAGTTCATAGGTGGCAGAACTAGAGGTCAATCCG
ACATGATAGGTCATGGGGTCATGATCAATGGAACATGCTACTAATTGACG
TGGACGTATTGTTTTTGGTCTGTGTGTTTTCGCAGTTAGATATTTTTCAT
TTCCTTTTCATGTTTACATTAGAGCGACAGAAAGTGATACATTTTAAAAG
TGATAAATGACATGTTATGTTAATAAAAACCTCACTTACATGATTAATCA
AGTCAATAAAATAAGCCATTTGAGAAACTCTATTTCACGGAGGCGTGAGG
TCTTCGAACTCTTGTTTTCTCTGTATATTACAGGTATGGCGTGATGATGC
AGTGCTGGAGTTGGCGGCCAACAGAGAGACCAACCTTCCGCCAACTGGAA
CTCACACTGGATAAAGACCTCTCCTTCTACGGGCCTGACTACGACAGAAT
AACTGGATAA Coding sequence (CDS) from alignment at Sc0000087:209009..215518- >Blg03349.1 ID=Blg03349.1|Name=Blg03349.1|organism=Branchiostoma lanceolatum|type=CDS|length=1629bp|location=Sequence derived from alignment at Sc0000087:209009..215518- (Branchiostoma lanceolatum)
ATGCGTGGCGTGACCGTGCTTGTCGTAGACCCAAACACCACGCCTGTTCC
AGAGCAGGGTCCCACACCAATCGCCGTACCTTTCGCCGCAACCGGTGCCA
TCGCCGCCAGCAGTGCCGGTATCGTCGCGGTACTGATCCTAGCAGCGGCC
GGCTTCATCTTCGTCCGCCGGTGGAGGAAGAGGAGGAATGATGATGATGG
AGAGACGATATACATCGACGATTTCTTCCCTTTTGATAGAGAAATTCACT
GGAGAAGGATGCAGGAGCCCCCGCCGGTCCCTCCTCGGCCACAGTTCCCA
GGGTTGGAGGTCGACCCCAGCCGGGTGACCCTGGGTCAGAGGATCGGCAG
CGGGGCCTTCGGCGTCGTTTACGGGGCAGTCTTGAAGCGGGGCAGCGACA
CAGAGGACGTCGTCGTCAAAACTGTCAGAGGTAAGAAACAGGCACAGAGT
GGGAAAGAGAAAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGGGGGGAGAGAGGGAGAG
AGGGAGAGAGGGAGAGAGAGAGAGAGAGNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGGGGGGGGAGAGAGGGAGAGGGAGAGAGAGAGAGAGAGGGAGAAAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGAGGAGAGAGGGGG
CAGACAGGCTGACGGATTGACAGAGGAGGCAGAGACCAATAATTACTTAC
CTGTCCTCTCCGTCATTGTGCACAACGCCAGTGAAGAAGACAAGTTGAGT
TTCCTGCAGGAAATCCGCGCAGTCGTAGACCTGGGTGCGAACGACAACCT
CCTCGGTCTGGTCGGCTGCTGCACCCTGGTGCGAGACCATCTGTATCTCA
TCACGGAGTTCATGCCGTACGGAGACCTGAAGAGCTTCTTGATAAGATGC
CAAGAGGAAGAGACGACCGACAGTCCCTCAGACGACATTTACATCTTCCA
AGCGCTCCAGATGTACCAGGTGGCCCGACAGATCGCAAGAGGCATGGATC
ACATCGCCCGGTCTCGTTACGTCCACGGTGATCTAGCCGCCCGGAACGTG
CTGGTCGGGGAAGACCTGAAGGTGAAGATTTCCGACTTCGGGCTGGCAGA
AGACATCTACAGCCGAGGTTACAATCGGCAGGACCGGCTGAGGAAGTTGC
CATTAAAGTGGATGGCGCCTGAGCGGCTGCAGGATGGGTCAGTCTACACC
GCACAGAGCGACGTGTGGTCTTTCGGCATAGTGCTGTACGAGATAAGTTC
GCTAGGGGGCAATCCTTTCCCTGACGTGCCACCAGGAGAGCTCAAAGATC
GTCTGCAGGCAGGACACAGAATGGCCAAACCTGAGCGCTGTCCACAAGCC
ATGTATGGCGTGATGATGCAGTGCTGGAGTTGGCGGCCAACAGAGAGACC
AACCTTCCGCCAACTGGAACTCACACTGGATAAAGACCTCTCCTTCTACG
GGCCTGACTACGACAGAATAACTGGATAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg03349.1-exon-Sc0000087-1570713199:215494..215518 | Blg03349.1-exon-Sc0000087-1570713199:215494..215518 | Branchiostoma lanceolatum | exon |
| Blg03349.1-exon-Sc0000087-1570713199:214602..214820 | Blg03349.1-exon-Sc0000087-1570713199:214602..214820 | Branchiostoma lanceolatum | exon |
| Blg03349.1-exon-Sc0000087-1570713199:213211..213823 | Blg03349.1-exon-Sc0000087-1570713199:213211..213823 | Branchiostoma lanceolatum | exon |
| Blg03349.1-exon-Sc0000087-1570713199:211874..211887 | Blg03349.1-exon-Sc0000087-1570713199:211874..211887 | Branchiostoma lanceolatum | exon |
| Blg03349.1-exon-Sc0000087-1570713199:211300..211484 | Blg03349.1-exon-Sc0000087-1570713199:211300..211484 | Branchiostoma lanceolatum | exon |
| Blg03349.1-exon-Sc0000087-1570713199:211006..211095 | Blg03349.1-exon-Sc0000087-1570713199:211006..211095 | Branchiostoma lanceolatum | exon |
| Blg03349.1-exon-Sc0000087-1570713199:210442..210659 | Blg03349.1-exon-Sc0000087-1570713199:210442..210659 | Branchiostoma lanceolatum | exon |
| Blg03349.1-exon-Sc0000087-1570713199:209729..209866 | Blg03349.1-exon-Sc0000087-1570713199:209729..209866 | Branchiostoma lanceolatum | exon |
| Blg03349.1-exon-Sc0000087-1570713199:209009..209135 | Blg03349.1-exon-Sc0000087-1570713199:209009..209135 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000087 | genome | Sc0000087:209009..215518 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg03349 |
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