Blg03263.0 (mRNA) - B. lanceolatum

Overview
NameBlg03263.0
Unique NameBlg03263.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000020:3046754..3051881+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg03263.0 ID=Blg03263.0|Name=Blg03263.0|organism=Branchiostoma lanceolatum|type=mRNA|length=5128bp|location=Sequence derived from alignment at Sc0000020:3046754..3051881+ (Branchiostoma lanceolatum)
ATGTTCCCGCAAGGAACCGTTAGGGTACTGTTCGCTCTAGGACGCAGCGG CGATGCCCTGTTGGAGAAAACCGTACAGAAAGAGATAAAAACAAACGGAG ACATCATACAAGAGGATTTTCGAGACACCTACAGGAACTTGACCACGAAA ACAGTCATGATCCTCAGATGGGCTGTTACGTTTTGCAGCGGCGCTAGATA CGTCATGAAAACCGACGATGACATGTTTGTGAACATCAAGACACTGGTGT CGAATCTTAAGTCTTTAGAACTGGAAGTTGACCTAAGTTCTGGTTTGCTT ATGGGACCTATCCAAACGGGTGTCCGCCCTATAAGAAGTAGAAGCAATAA GTATTACGTCTCGAAGGAAGATTTTAACGGTGACGTGTACCCAGACTACC TCAGCGGAACAGGTTACGTCATGTCCATGGGTGCGGTGAGAAGACTTTAC GTCACATCGCTGATGACGTCACCTATGCCAATGGAGGATGTATACATGGG GATCTGTGCAAAAAAGGCGGGAATTTCACCCCGGGACCACAGGTATATCG GTTTCACGTTAGAAACATTTAAGTTTGATTGACGGTCATTTTAGCTCAGG AAGCTGCATAATTTAGTATAAGACCAGCTTCATCAAGGAAAAGGGAGATA CACAAAATTCAAACTCCAGTAGAAAAACTCTTAACACTTCCAAGTTTATT TTTGTTCTAGCTTCGAAAAAATAGACAGTGGTCTTGGAGAAATATGGATA AAGGGATATTGTGAAATGTGTAACCGACTTATCCAGAACCAACTTGTCTC GGTAGTACGTAAACATTAACTCCATTCTATAGGGCAATTAGTTCATAAAA CTTGTACGTCCAAAAGCATTATTGAAAATCGAAATAATGAAAAGGAATCT ATTATCTATAAATCTTCATCGTATGTACCATATCACGTTATGTTTGTACA TTATCACCAATTGTTGTTCACTTGTAGTTAGCCTACGAACACGAATTCGC AATGAACTTTTATTGAGATAAATGTAACCTTAACCAAAAATATCATAAGT GTTTGGCTAATCTCCAAGCAGATCTAACGGTTGCAAAGACCGTATCCAAC TGGCAACTTTGCAATAAAAACTCCTTTTGCCAGTTGGATACGGTCTTTGC AACCGTTAGATATGCTTCTCTCTCTCTCTCTCTCCCATAGCTAGATATGC TTAGAGATTAGTATTTGGCTGCTCCTACCCTATTTTGTTGTCAATATACT TGAAATTTCCCCGAATTCGCGAAGCATCAATGTTCTATTATTTCTTTCCC TCGCAGTGGTTTCACATTCCACCAGTTCGGTTTCACCGTGTGCACCCATC GTCTGATCGTGACTTCCCACCACTACACCCCGACAGAACTCTTCACCATG TGGGCAGCTCTTCAGAGTAGTCCCGAATGCGGCCGGTTACAGACATACTT CTCAACCCTCTACGCAAAGCTAGTTAACATCGTCAGCTTTTTAGATATTC CAATATAGTGGTGCCTTGTTTATTTAAGGGCTGCGGTGCAATTGAAGAAT AACAATCTCTCATAATACGTTGTTATCATTTATGAATAGAAATTATTAGA TAAAATGGCTGTTTCACGATAAGTATAAATACTGTAACGTTACATTTTTA TAAACAAGACTTGTTTGCATGTGGTCATACGGGCCCTGAGAAATAAAGTT CACACTTCTCACCATGTGTTTGCGTGTTCTCACTAACAATGTTAAGTTAG GTATAAATAAAAATACTGATTGGAGGGCTTTGGTCAAATCGTCGTCTGTC CCCTCCCCTATTTACTATTTAGACAGTCCTATGGTCTACACGCCTCTCTG TAACTGTCCTTGCCAAATTTCTGAAATACACCTTGTTCAACGAAGTTCAC CAATTCTTCTAGCGGACAAAGTTTTGTCTGAAGTTTCCCTGCGCAAAATT CCAACATGTCCGTCACATCTCTTCCCATGTGGACGAATCGTACGAAAGTT TTATCAAGTGACGTCACCGCTTGTTTTAATTCGAGTTTTCTTGGTTTAGT TAAAGTGGAGTTTTTCTCAAACGACGTCTGCTCTTCGTGACGATCTCGTT CCCACATTTCCATGACAACGTGTGACGCGTAGGGCACCCACCGCGCATGC GTCAGTCCCAGTACGCTCAGCAATGGCGNTCAATATACTTGAAATTTCCC CGAATTCGCGAAGCATCAATGTTCTATTATTTCTTTCCCTCGCAGTGGTT TCACATTCCACCAGTTCGGTTTCACCGTGTGCACCCATCGTCTGATCGTG ACTTCCCACCACTACACCCCGACAGAACTCTTCACCATGTGGGCAGCTCT TCAGAGTAGTCCCGAATGCGGCCGGTTACAGACATACTTCTCAACCCTCT ACGCAAAGCTAGTTAACATCGTCAGCTTTTTAGATATTCCAATATAGTGG TGCCTTGTTTATTTAAGGGCTGCGGTGCAATTGAAGAATAACAATCTCTC ATAATACGTTGTTATCATTTATGAATAGAAATTATTAGATAAAATGGCTG TTTCACGATAAGTATAAATACTGTAACGTTACATTTTTATAAACAAGACT TGTTTGCATGTGGTCATACGGGCCCTGAGAAATAAAGTTCACACTTCTCA CCATGTGTTTGCGTGTTCTCACTAACAATGTTAAGTTAGGTATAAATAAA AATACTGATTGGAGGGCTTTGGTCAAATCGTCGTCTGTCCCCTCCCCTAT TTACTATTTAGACAGTCCTATGGTCTACACGCCTCTCTGTAACTGTCCTT GCCAAATTTCTGAAATACACCTTGTTCAACGAAGTTCACCAATTCTTCTA GCGGACAAAGTTTTGTCTGAAGTTTCCCTGCGCAAAATTCCAACATGTCC GTCACATCTCTTCCCATGTGGACGAATCGTACGAAAGTTTTATCAAGTGA CGTCACCGCTTGTTTTAATTCGAGTTTTCTTGGTTTAGTTAAAGTGGAGT TTTTCTCAAACGACGTCTGCTCTTCGTGACGATCTCGTTCCCACATTTCC ATGACAACGTGTGACGCGTAGGGCACCCACCGCGCATGCGTCAGTCCCAG TACGCTCAGCAATGGCGTCATGGTCATGTCGTGCCCAGAGTACACCACAA ACTTGGCAACGTCCGCCTTTTCCTCTACAAATCTTTCCATTCTTTTTGCT ATGGAGCTTAGAAGAGGTTGAATCGCAAGACGCGAATAGTTATTGAATGA TTCTCGTCTCAGTTGTTCCTGATCTTGGTTGATAAACTTGAGTACGTTCC GCGCATGCTCCCTCTCCAAGCATGCTTGAGTATGCGTAGTACACGGAAGT TTCAGCCTATTGCACACGTGACCAAATAAAGCGTCTATTATCTTAAATCG AACGTTAGCTACTTTGCTATCAAGAGTCTTTGCAACGGTTTCTAGCGCGG ATACGAACTCTGAGTCCTCGTGAAACCTTTTGGCATCTACTGATTTGAAT TGCTTCATGTACTCATTTCTCAGTGGACACTGACAGCTTGCACCACAAAA CAGTACGTTATTTTCTTGATGTACTCTTATCTTCGGTAAGTCATCCTGCA GTACACCATACATCAGCGCGGTGGCGCTTTGGTACGTTCTGGAATACGGT GTGGTGATGACAGTAAATTGGTCCTCTACGCCCTCAACGGTTAACAGTTT GCTGTCTATGTAAGCTCTTCGTAGTTTCTCCCCGACGCGAAGAAGTTGAA CTACCCCGGTTTGTGTTAATCTAGACGGCCCGCCGGCGCTGTTAGGATAC GGCGACATACTCGCTACACCGTTCGCAGAGCTTCGGAAGACGTTCGGACT TCTCCGTAACTTCTCGGCGCTCTTCACGAACGGCGAAAGAAGTGGGTCGG TCGGCCATTTGTCGGGGTCCAGTTTGCATGTCCAGGAGTTGTAGTTGTAC TTGACGTTGGGAAGCGTTTCCATGGGAACCCTGTCGCCATGGCGAGTCAC AACAAACACGGCTTTCAGGCGAAATCCCTCAGGGACCTGACCTACAGACG GAAAACAGACAGACAAATTGATAGGGTAGCCCAGACTTCAAACTTAGAGC GCTTCTTACATGTATATAGAAACAGGTTAAGCTCTACATATCAAATACAC AAGTCGGAGTACATACGCTACAGGTCGGTGTACATACGCTACAAGTCGGG GTACATACGCTACAGGTCGGGGTACATACGCTACAAGTCGGGGTACATAC TCTAAAAGTCGGGGTACATACGCTACAAGTCGGGGTACATACGCTACAAG TCGGGGTACATACGCTACAAGTCGGGGTACATACGCTACAAGTCGGGGTA CATACGCTACAAGTCGGGGTACATACGCTACAAGTCGGGGTACATACGCT ACAAGTCGGGGTACATACGCTACAAGTCGGGGTACATACGCTACAAGTCG GGGTACATACGCTACAAGTCGGGGTACATACGCTACAAGTCGGGGTACAT ACGCTACAAGTCGGGGTACATACGCTACAAGTCGGGGTACATACGCTACA AGTCGGGGTACATACGCTACAAGTCGGGGTACATACGCTACAAGTCGGGG TACATACGCTACAAGTCGGGGTACATACGCTACAAGTCGGGGTACATACG CTACAAGTCGGGGTACATACGCTACAAGTCGGGGTACATACGCTACAAGT CGGGGTACATACGCTACAAGTCGGGGTACATACGCTACAAGTCGGGGTAC ATACGCTACAAGTCGGGGTACATACGCTACAAGTCGGGGTACATACGCTA CAAGTCGGGGTACATACGCTACAAGTCGGGGTACATACGCTACAAGTCGG GGTACATACGCTACAAGTCGGGGTACATACGCTACAAGTCGGGGTACATA CGCTACAAGTCGGGGTACATACGCTACAAGTCGGGGTACATACGCTACAA GTCGGGGTACATACGCTACAAGTCGGGGTACATACGCTACAAGTCGGGGT ACATACGCTACAAGTCGGGGTACATACGCTACAAGTCGGGGTACATACGC TACAAGTCGGGGTACATACGCTACAAGTCGGGGTACATACGCTACAAGTC GGGGTACATACGCTACATGTACTGCTAA

Coding sequence (CDS) from alignment at Sc0000020:3046754..3051881+

>Blg03263.0 ID=Blg03263.0|Name=Blg03263.0|organism=Branchiostoma lanceolatum|type=CDS|length=1587bp|location=Sequence derived from alignment at Sc0000020:3046754..3051881+ (Branchiostoma lanceolatum)
ATGTTCCCGCAAGGAACCGTTAGGGTACTGTTCGCTCTAGGACGCAGCGG
CGATGCCCTGTTGGAGAAAACCGTACAGAAAGAGATAAAAACAAACGGAG
ACATCATACAAGAGGATTTTCGAGACACCTACAGGAACTTGACCACGAAA
ACAGTCATGATCCTCAGATGGGCTGTTACGTTTTGCAGCGGCGCTAGATA
CGTCATGAAAACCGACGATGACATGTTTGTGAACATCAAGACACTGGTGT
CGAATCTTAAGTCTTTAGAACTGGAAGTTGACCTAAGTTCTGGTTTGCTT
ATGGGACCTATCCAAACGGGTGTCCGCCCTATAAGAAGTAGAAGCAATAA
GTATTACGTCTCGAAGGAAGATTTTAACGGTGACGTGTACCCAGACTACC
TCAGCGGAACAGGTTACGTCATGTCCATGGGTGCGGTGAGAAGACTTTAC
GTCACATCGCTGATGACGTCACCTATGCCAATGGAGGATGTATACATGGG
GATCTGTGCAAAAAAGGCGGGAATTTCACCCCGGGACCACAGTGGTTTCA
CATTCCACCAGTTCGGTTTCACCGTGTGCACCCATCGTCTGATCGTGACT
TCCCACCACTACACCCCGACAGAACTCTTCACCATGTGGGCAGCTCTTCA
GAGTAGTCCCGAATGCGGCCGGTTACAGACATACTTCTCAACCCTCTACG
CAAAGCTAGTTAACATCTCGGGGTACATACGCTACAAGTCGGGGTACATA
CGCTACAAGTCGGGGTACATACGCTACAAGTCGGGGTACATACGCTACAA
GTCGGGGTACATACGCTACAAGTCGGGGTACATACGCTACAAGTCGGGGT
ACATACGCTACAAGTCGGGGTACATACGCTACAAGTCGGGGTACATACGC
TACAAGTCGGGGTACATACGCTACAAGTCGGGGTACATACGCTACAAGTC
GGGGTACATACGCTACAAGTCGGGGTACATACGCTACAAGTCGGGGTACA
TACGCTACAAGTCGGGGTACATACGCTACAAGTCGGGGTACATACGCTAC
AAGTCGGGGTACATACGCTACAAGTCGGGGTACATACGCTACAAGTCGGG
GTACATACGCTACAAGTCGGGGTACATACGCTACAAGTCGGGGTACATAC
GCTACAAGTCGGGGTACATACGCTACAAGTCGGGGTACATACGCTACAAG
TCGGGGTACATACGCTACAAGTCGGGGTACATACGCTACAAGTCGGGGTA
CATACGCTACAAGTCGGGGTACATACGCTACAAGTCGGGGTACATACGCT
ACAAGTCGGGGTACATACGCTACAAGTCGGGGTACATACGCTACAAGTCG
GGGTACATACGCTACAAGTCGGGGTACATACGCTACAAGTCGGGGTACAT
ACGCTACAAGTCGGGGTACATACGCTACAAGTCGGGGTACATACGCTACA
AGTCGGGGTACATACGCTACAAGTCGGGGTACATACGCTACAAGTCGGGG
TACATACGCTACAAGTCGGGGTACATACGCTACAAGTCGGGGTACATACG
CTACAAGTCGGGGTACATACGCTACATGTACTGCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg03263.0Blg03263.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg03263.0-exon-Sc0000020-1570713199:3046754..3047295Blg03263.0-exon-Sc0000020-1570713199:3046754..3047295Branchiostoma lanceolatumexon
Blg03263.0-exon-Sc0000020-1570713199:3048999..3049173Blg03263.0-exon-Sc0000020-1570713199:3048999..3049173Branchiostoma lanceolatumexon
Blg03263.0-exon-Sc0000020-1570713199:3051012..3051881Blg03263.0-exon-Sc0000020-1570713199:3051012..3051881Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000020genomeSc0000020:3046754..3051881 +
Properties
Property NameValue
GeneIDBlg03263