Blg03231.0 (mRNA) - B. lanceolatum

Overview
NameBlg03231.0
Unique NameBlg03231.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000020:3563208..3564688+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg03231.0 ID=Blg03231.0|Name=Blg03231.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1481bp|location=Sequence derived from alignment at Sc0000020:3563208..3564688+ (Branchiostoma lanceolatum)
ATGGCCAAAGTGAAACGTAAATATATAAGCGCGAGTGGCACAGACCGTAA
GTGATTTCATGTAAATAATGTCTAAAGAAGGTTTTAGAAATGCATTCCAA
GACACAACTGTATTACTGGGTTTCTACAGATTATGGTAACAGAAACAAGT
ATTCTCCATGGCAGGATAGTACAGAGAAACACTCAAATAAATACATCGAT
TATGTCATCTTACAATTTAAAGCCAACAGTTTGACTGGAGATTATATTGT
TCTTCAGTGTTTATTTTCCGTGTTTTGAGTTCAACTATTGTGCTTTCAGT
GGCTCATGTTAATTTTGGCACTTTTGTAGGTGGTATCAGCCTGGTTGCTG
TAAAGCAGCTGGCCAGAAGGACGAAAGCCACCAACCTGAGCCTTTTGCAG
GAGCCAGACATCCTGGCAAGGGTGTGTCACAAGCAGTGGTTCCCATTAAT
TAATGGGATCAACCCTGATGTGCCACAGCCCTTTCTTGTCCAGGAGTTGG
TCTCCAGCACAGAAGGCAGCATGATAAGCGTTGGCTTTCATTACCGGTAC
CTGTTAAACTGTGACGGGTCCAGCCGGGGGAGACCACAGTAAAAGAGGTC
AGGGACAACAGAGTGAAACAGGTGGCACACGGTGTGCAGTATCTGCACTT
TCGGAAGATACTGCCACAACGACATCAAGGTGGGTAAAATAAAGTATCAG
TGTTAATACTGGTACAGATGCCAAGACAAACACGGACATATGTTTGATAT
ATAGCATTTTAAAGGGATAAATGGTCAGTGCGATGCAAGAAAAATGATTG
TCAGTCCTCTGAAGTCATAAAATAAGTTTGAGAACGGAGGGTGCCAATAT
GTAACTGACAACAGTATGTGATAGTATAATGTTTTGTGGGCAAAGCCTGG
TGATTCTGCTATGGAATTCGAAGTTATGCACTATATTTGTTCAAATATAG
TGGAGTGGCTATTTTGTTGCAATGGATAATCATGTGCTTTTAAAATTGGT
TATTTGAATGCCAACACACAATATGTGTATATATTGTATTTCTAGGCTCC
ATTAATTCTATTAGTTTGATCATACTATCAGTCAAAAAAAGTAATCAACA
TTACCCTGCTTACTGCGTTGAAGTTGACCATTTGGTTGCAGTAACTTATT
AGTGTCTACTTTTGCAGTTTTAGACTGATAACGTCCTTCTGAGAAGGGGA
TCGGACCACGGCTCACAGCCAAGCTGATCGATTTTGGCTGCGCCTCCTGG
ACAGAGAACCCCATCGGCTCCCATTGTGGTGAAGGGGCTAGTAACCACAT
CGCCCCGGAGGTCCGAAAGGGCGAAGTGGTGACGACCGCCACCGACGTGT
ACAGCATGGGCAGACTTCTGGATGATGTATGCCGCGTCTACAAGCCGGTC
TCTAGTATCATAAGGACGGCCACCAAGGCTAAGCCGAACAGCAGGCAGTC
ATTGGCAGTCATGATCCAAGGGCTGGAGTGA

Coding sequence (CDS) from alignment at Sc0000020:3563208..3564688+

>Blg03231.0 ID=Blg03231.0|Name=Blg03231.0|organism=Branchiostoma lanceolatum|type=CDS|length=423bp|location=Sequence derived from alignment at Sc0000020:3563208..3564688+ (Branchiostoma lanceolatum)
ATGGCCAAAGTGAAACGTAAATATATAAGCGCGAGTGGCACAGACCGTGG
TATCAGCCTGGTTGCTGTAAAGCAGCTGGCCAGAAGGACGAAAGCCACCA
ACCTGAGCCTTTTGCAGGAGCCAGACATCCTGGCAAGGGGGATCGGACCA
CGGCTCACAGCCAAGCTGATCGATTTTGGCTGCGCCTCCTGGACAGAGAA
CCCCATCGGCTCCCATTGTGGTGAAGGGGCTAGTAACCACATCGCCCCGG
AGGTCCGAAAGGGCGAAGTGGTGACGACCGCCACCGACGTGTACAGCATG
GGCAGACTTCTGGATGATGTATGCCGCGTCTACAAGCCGGTCTCTAGTAT
CATAAGGACGGCCACCAAGGCTAAGCCGAACAGCAGGCAGTCATTGGCAG
TCATGATCCAAGGGCTGGAGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg03231.0Blg03231.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg03231.0-exon-Sc0000020-1570713199:3563208..3563253Blg03231.0-exon-Sc0000020-1570713199:3563208..3563253Branchiostoma lanceolatumexon
Blg03231.0-exon-Sc0000020-1570713199:3563537..3563628Blg03231.0-exon-Sc0000020-1570713199:3563537..3563628Branchiostoma lanceolatumexon
Blg03231.0-exon-Sc0000020-1570713199:3564404..3564688Blg03231.0-exon-Sc0000020-1570713199:3564404..3564688Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000020genomeSc0000020:3563208..3564688 +
Properties
Property NameValue
GeneIDBlg03231