Blg03230.0 (mRNA) - B. lanceolatum

Overview
NameBlg03230.0
Unique NameBlg03230.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000020:2676483..2678880+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg03230.0 ID=Blg03230.0|Name=Blg03230.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2398bp|location=Sequence derived from alignment at Sc0000020:2676483..2678880+ (Branchiostoma lanceolatum)
ATGCGTTGGAAACCACCACAGCCGTTCAACACTCCTTGGGCACCACAGAC CTACAACGCTACCCATATACGACCTGGCTGTTATCAGGTAAGTCTACCAA GATAGCTACAAGATGGGCAATGGATGTCATTTGAAGACAGCAGAACAACG TCCAGACTTTGCATGATGTACAAGATGACTAATAAACTTGTGGACGTACC AACTGATAAGTATCTAATGCCAGCTCAGAAGAGGACTAGAAATAGCCATG CTTTTAAGTACCAGAGTTATCAGCCAAGGATTGATGTGTTCAAAATTTCG TATTTCCCGAGAACCATAGTAGAATGGAACTCGCTGTCATCAAGTATTGT AGGAGCATCCTCACTAAGTAGCTTTAAAGAACGGTTGCAGTCAGATATGC AAAGACTAGGTGTAACAGACCGTTCGGTGTAATATGACCAGCTGCTACCG CGCCGCGTGCCTGCAAAGCTAGTGTGTTACGCCTAATGGCGGTTATACCG GCTATATAGATACAGATAAGATGTTTTAATCTCGTCCTCTATGCTCAGTA AGTCTAGATTCTTCAAGGAAAAAAGAGAAATGGGCGTGGCAGTAAAGTGT CAATCCAATCCAGCTTGACCATTTTTCTACACATGAATACATGCCTATAC TGATTTATACTGTTATGGTGATGTGCGTTTCCTCCTTTCACCTATACAGA CTGCCTGCCTCTATCTACCTGACGTCCGCCAGGAGTATGGCTGTCCACGG GATAACAAGTTCAGCGAGGACTGCCTGCACCTCAACATCTTCACCCCCCT CCCCTTCAACCCTTCATCAAAATTACCAGTGGCCATCTGGTTCCCGGGGA AGCGGTACAAGTATGGTTCAGCTACAGACCTGGTTCTTGACGGCAGATTT TTAGCCAATAAAACAAGGGCCATTGTAGTCACCACTAACTACAGACTTGG GGCTCTGGGCTTTCTGGTAGCTGGGGAGGGGGAGGGAGCAGCTACAGGGA ATTATGGAACACTGGATCAGATAGCTGCTATGCAATGGGTCCAGAATAAC ATAGGGAGCTTTGGAGGGGACAAAGACCAGGTGACCATCATGGGGCAAAG TTCAGGAGCAGATTCTGTGGCGCTTCATCTCCTGGCAGAAAATACTGAAT ACCTCTTCAAACAGGCCGTCATGATGAGTATTCCCTTTATTTCTCACAAG ACACGTGCTGAAGCCCTGCAGCTCAGCAAGGTTGTAGCTGAACTTCTGAA CTGTACCACAGGCAACATGACATGCTTTCGGGCTGCGGAAGCAGACATGG TCAATAAGGCTGGGTCAGAGTCTGAGCCTGCCGTCCCAACAGACATCATA CAGAAGTATGTGGAGTGGGCACCTCATGTTGATGGAATCACCGTCAAGAC TCAACTCCTTCAGGACATGTTCTTGCAAGGAAAGTTCCAGAAGAAGCCCT TTATCCTTGGTTCTACCACTGATGAAGCCTTTCCGATCATGTATTCTGCA TGGAGGGACAGCATGAGGAAAAGCTTGTACAAAGAAGTCATGCTTAGCGT TTTCCTGGGGAAAGCAGAATTAGTGCTGCAAGAGTACCCGCCAGATTCAT CTAGAGACCAACGCCCGACCCTATCACGTGCTTCCACGGACCATTATTAT GCCTGTCCTGCACGGAGGGTGATCCGAGCGGCCACCGACTTTGAACTGCC AGACGTGTGGCTTTACCGTTTTGATCAGATCATGACGAAGGCCAATGATG TGGCCGTGTGGTCACAGTTCGACCAGGAGTGCTATAGCCGCGTCTGTCAC GGATCAGACGTCCCCTATCTCTTCCAAACCCTGAAGCTAGCCGGACTGAA CGTGACAGATGAAGAACAGAGCACAGCCGACTCAATGGCCTACTACTTTG GAAACTTCCTCCACACCGGAGATCCCAACAACTCAGGATGGCGAGTTTCC TCCCAGCACCAGGTCCATCCACAACAGCCTGGTGACGCCATCAACTGGCC AAAGTACAACAAGCTCAGCAACTACGTCAACATGAAGTTCACTGCACCAA CTAACCAACTGGAACAGGGATATCTAGCCGAGAAGTGTGATTTCTGGGAC AAGAACTTTCCATAAACATTGACACAGCATCTCAAAATATGTGAAATTCC ATTACCGTTAGCTTTTAGATGAAGAATCTAGATTCTAATTTTAGTTATCA GCTTCTTTTGGGGATATCAGACCTAGATAACAATGATCTCCTTAAACTTG TTAGACACTCTTAAAGTTAGTTCATGATTGAACAGAAAGTATAGAAACAA TTCGAACAATTAACTGTTAATCGTTTATCTCCTTACAATTTTGCACATAC TTGTAAGTGTACGCTAAATCAACGGTAGGGGATATCAACATGTGTTAA

Coding sequence (CDS) from alignment at Sc0000020:2676483..2678880+

>Blg03230.0 ID=Blg03230.0|Name=Blg03230.0|organism=Branchiostoma lanceolatum|type=CDS|length=1503bp|location=Sequence derived from alignment at Sc0000020:2676483..2678880+ (Branchiostoma lanceolatum)
ATGCGTTGGAAACCACCACAGCCGTTCAACACTCCTTGGGCACCACAGAC
CTACAACGCTACCCATATACGACCTGGCTGTTATCAGACTGCCTGCCTCT
ATCTACCTGACGTCCGCCAGGAGTATGGCTGTCCACGGGATAACAAGTTC
AGCGAGGACTGCCTGCACCTCAACATCTTCACCCCCCTCCCCTTCAACCC
TTCATCAAAATTACCAGTGGCCATCTGGTTCCCGGGGAAGCGGTACAAGT
ATGGTTCAGCTACAGACCTGGTTCTTGACGGCAGATTTTTAGCCAATAAA
ACAAGGGCCATTGTAGTCACCACTAACTACAGACTTGGGGCTCTGGGCTT
TCTGGTAGCTGGGGAGGGGGAGGGAGCAGCTACAGGGAATTATGGAACAC
TGGATCAGATAGCTGCTATGCAATGGGTCCAGAATAACATAGGGAGCTTT
GGAGGGGACAAAGACCAGGTGACCATCATGGGGCAAAGTTCAGGAGCAGA
TTCTGTGGCGCTTCATCTCCTGGCAGAAAATACTGAATACCTCTTCAAAC
AGGCCGTCATGATGAGTATTCCCTTTATTTCTCACAAGACACGTGCTGAA
GCCCTGCAGCTCAGCAAGGTTGTAGCTGAACTTCTGAACTGTACCACAGG
CAACATGACATGCTTTCGGGCTGCGGAAGCAGACATGGTCAATAAGGCTG
GGTCAGAGTCTGAGCCTGCCGTCCCAACAGACATCATACAGAAGTATGTG
GAGTGGGCACCTCATGTTGATGGAATCACCGTCAAGACTCAACTCCTTCA
GGACATGTTCTTGCAAGGAAAGTTCCAGAAGAAGCCCTTTATCCTTGGTT
CTACCACTGATGAAGCCTTTCCGATCATGTATTCTGCATGGAGGGACAGC
ATGAGGAAAAGCTTGTACAAAGAAGTCATGCTTAGCGTTTTCCTGGGGAA
AGCAGAATTAGTGCTGCAAGAGTACCCGCCAGATTCATCTAGAGACCAAC
GCCCGACCCTATCACGTGCTTCCACGGACCATTATTATGCCTGTCCTGCA
CGGAGGGTGATCCGAGCGGCCACCGACTTTGAACTGCCAGACGTGTGGCT
TTACCGTTTTGATCAGATCATGACGAAGGCCAATGATGTGGCCGTGTGGT
CACAGTTCGACCAGGAGTGCTATAGCCGCGTCTGTCACGGATCAGACGTC
CCCTATCTCTTCCAAACCCTGAAGCTAGCCGGACTGAACGTGACAGATGA
AGAACAGAGCACAGCCGACTCAATGGCCTACTACTTTGGAAACTTCCTCC
ACACCGGAGATCCCAACAACTCAGGATGGCGAGTTTCCTCCCAGCACCAG
GTCCATCCACAACAGCCTGGTGACGCCATCAACTGGCCAAAGTACAACAA
GCTCAGCAACTACGTCAACATGAAGTTCACTGCACCAACTAACCAACTGG
AACAGGGATATCTAGCCGAGAAGTGTGATTTCTGGGACAAGAACTTTCCA
TAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg03230.0-exon-Sc0000020-1570713199:2676483..2676569Blg03230.0-exon-Sc0000020-1570713199:2676483..2676569Branchiostoma lanceolatumexon
Blg03230.0-exon-Sc0000020-1570713199:2677182..2678880Blg03230.0-exon-Sc0000020-1570713199:2677182..2678880Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg03230.0Blg03230.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000020genomeSc0000020:2676483..2678880 +
Properties
Property NameValue
GeneIDBlg03230