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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000020:932628..940223- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >Blg03217.0 ID=Blg03217.0|Name=Blg03217.0|organism=Branchiostoma lanceolatum|type=mRNA|length=7596bp|location=Sequence derived from alignment at Sc0000020:932628..940223- (Branchiostoma lanceolatum)
ATGTACTTAATATTTACTATGAAGGATGAGAACGTGATCCCCAGCCAAAG
TTAGCTGCCAACTCACAAGCTGACCCACTGCAGGAGTGTTGTACTGACTG
TTGTATTGACCTGTATGTCACTGATTTGTTCCTCTCCCTCTCTACAGTCC
GTAAGGAATGGGCAGTACGGGAGGATGGTGCGTTTGCCATGCAGCTTCAG
GATGAGGAAAGTGAGTACCAATTAATGACATGTTCAGCGAAGACAAGAAC
TGCGGACCTAGATCGACTAGACATATATGGTGGTTTAGGTCTGGACCTGT
ACCTGTACCTCAACAATTTAGCAAATTAACCTGACTGGTCTTCAATAATG
ACAGAAACATGAATAAATGTTAATTGCATGAGCGTCTTATGCAGAAAACC
GATTCTTTTGACTTTGAGAGGATTTTAAATCGGTATGGTGGCCTTGAAAA
GGAGACGTTTGGCAATGAACACCTGTACAATGTTTTCATCTTTTTCCAGG
TTAAGTTCTATCTCTGTGGTTGGAATAACACATTTTTAGTAACAGAATAA
GTTAAAAAGTTGTTTAGTTTATGACTTTTCAGGTAAAATCCCACTCTTTT
GATTATTTATATCAACCTTTTTCTTAAGTACAGTCAAACCTGCCTAGGCG
ACCACCTTTTCAACGCGACCACCTGGCCATGGCGACCGCTTTTTCTCGGT
CCCGAAAATTTTCCCCATAGGCACAAGCATTAAGCTGCCTGCCCAAGGCG
ACCACCCGTCCAACGCGACCGCGACCGCCACGAATTGGGACCGCACTGAG
CACAATCCCTGCCCATGGCGGCCGCCTAATTTTCAAGCGTGTGGTGACAT
CGGATCATTTTGCTGTAGGATTTAACGGAAATGTTTTCAAGACTTTGAAG
GACAAAAATATATGGAATAGCAATGTTATAGCATCGATTCCTCCATGAAG
TGTTTTAACAAAACATCCCCCCTATAAACATTGTAAAGACAAATGTTTGT
GATGTTGTTGTGCCTACCGCAAAGTCAGTTCGGTTTNGTTTTAATAAAAC
GTTCCCCCTATAAACATTGTAAAGACAAATGTTTGTGATGTTGTTGTGCC
TATCGTAATCTTATAGTTTACCGCAAACTCAGTTCGGTTTAAACTCAATT
TTGAAAACGAATACGTAGTGCATGGCGTCAAAAAGTCAGATTTCACAGAA
ATTACTATCTATTTCTTGTATTTTCAACAAAAATGTGTCTGCGTCTTACT
AAATTCCGCCGAAAATGGACTTCGCGGCGGGCAAAACATCGGGCGAGAAA
TGTTGTTCCTTGGTCCCGACGCCATCTTGGATTTGGCGCGGCCCGGATTT
GCCGTACCGCTGACCTTTCTAAAACACGATGCTTTTGTGTATGAACATTT
ACGAATACTCTTGCTATTAATGAAAATTAATATTCTTATTTTCTTTTTTT
TCCATGAATCTCACAAACCTTTATTGGACGCTGTGCGTTCTGCTGCACTG
ACTAATACCTTTCGATGCAGTCGCACAGAGCTTGGCGACGAAATCACACC
GTTCCGAAAACTTTTTTCCCCTTTTATCCAGCGGTCGGCGCCCCAAAAAA
GGCTGGGGCCAGCAGGTGTTTTCTAGGGATTTGTCTTAGGCCTTAAAACT
TCGATGATGTGCGTGTGTGTGTCTGTACTATTTAATGTACCGTGTGAATG
CGTGAGGGCGCTGCGAGATCATTGAGGCAACCATTGTTATGTAGTCAAAA
TTATGACGAGAATTTGTACACGATGTAGCGTTATACAATTATTACAACGA
TAACGGAAAATTTAATGTTTGTAGGATCTTTCTGTCAATGAGAATTGAAC
CTGGTGGGGGTCATGCTGTCTAAATTCACAGAATTTTCCATCCATTTACG
TACTGTATTTGAAAACCTCGACCTGGAAACATGTGAGTGGAATCCTCTTC
ATGGCGACCACCTGTCCATCGCGACCGTTTTTGCTTGGTCCGCCGGGTGG
TCGCCTTGGGCAGGTTTGACTGTAACTGAGAAATTGTCCTGTACAGAAGG
CAGAGTTAACATTGTTTTCAAGGAGTCTTCAATGCCCAAAATGTGTATGC
AAAGTCCTGAAATAATCTTAAGGTTAAATGTCTCTTTGGTCCTTGATTTG
TGAACCACAGTTGAGCAGCATTACTCGGGAAACATCATTCGGCGCCGTAC
CGTACGGAAGGACGTCGTCGTGGCGAAGGATGCGCAGCAGGAGGAGGACC
GCGTGGTTCAGGAGGCCATCATGAAGCGCATCGAAGAACAGCGGAGATTG
TAAGACGTCGTTTTTCTTCTTAACCTTCTTCCTGCTGCCTAACTCTGTAA
CCAATAGGGAATTGGGTGCCAAATGGCTACTTTAGTATGCTAAAGGTTAA
ATATGAACGATGGATCATTTCAAGAAGGAAACATACTTCGGTTGTAGTTT
GTTCAGTTTGACTAATACTGATATTTCTTTTTTTTTGTGTATGTGTGTTT
GATAAAGAGGAACTAGATTGTTCAGTTTAACTGGATACTGATATTTCTTC
TGTGTATGTGTACTTGATAAAGAGGAACTGGATTGTTCAGTTTGACTAAT
ACTGATATTTCTTCTCTGCACGTGTGTTTTATAGAGAGGAACTAGACCGA
GCTGTTGCAAGTAGCATGCAGGAAGCCCTGGAGAGAGAACAGGAGAGAAA
AGTCTTCCAAAAAGAGGCAGACGAGGTAAGGGACTGTTTCATAAGTTCTG
TGTTCTTTATAAACAGAATCAATCAGACATTCCCCCTACACCTCTCCCTT
ACATGTAGTTGCAGAATGAACTGTGCCAGCACCAACATTTCTATGTAGTT
TAAATGATTGTATGACGCTCTTGCTTTCAGAAGGGTGTACTTAAAGATCA
CTTAAAGTTTAAAGTAGTAAAGAACTTTTAAACATAGCACTTCCATGTCA
AGCTAGGAGAATTTATTTGCTAATTTCGTGCTGTATGTACTTTTCAGTAA
GGCATATATACACAAACGGCATGTTTAGATTTACTGTATTTATCACCGTT
TTATTTTGTTTTGTTTAGTACAGAACTTTCAAACATAGCACTTTCATGTC
AAGCTAGGAGAATTTATTTGCTAATTTCGTGCTATATGTACTTTTCAGTA
AGGCATATATTCACAAACAGCATGTTTAGATTTACTGTATTTATCACCGT
TTTATTTTGTTTTGTTTAGTACAGAACTTTCAAACATGGCACTTTCATGT
CAAGCTAGAAGAATTTATTTGCTCATTCCTTGCTATATGTACTTTTCAGT
AAGGCATATATGCAGAAACGGCAAGTCTAGATTTATTGTATTTGTCACCG
TTTTGTTTTGTTTGTTTGTTTGTTTGTTTTGTTTTGCTGTGTTGTGACGG
TGACCCCATCTTCCCACCTGCACTAGTTGTGGCTGACGTCCGAGCTCGAT
GCACAGAGGCGACAGGAGCTAGAGGATGAGGTTAGGAGTCCTGCCCGAAT
CCGAACTGTCTATCAACTCACTGTTTCTCTCTCTTCCTCTTTCAGCTACC
TCAACCACATGTCATCCTAAACACTAAACAAACTAAACAACATGTAATGC
CTGACTCACTCTCAATAAATAACAATTCATTTTTAACATATCTAGAGTAG
TGCTGCGTACCTAAACCCCGGACCTAACTTTTAGGTTCAAGTCCAAAATA
ACCTAAACATCTGGAAACAAGTCCGGACTTTAAAAAAAAATCTCTCGTGT
ATACTCTCCTTTTTGTTTTAAACCATCTTAAACCTTCCCTAGATCATGAA
ATTTGCACTGGAAAAATATGAAAACATTTTTGTTTTTGTGTTTATAAGTG
TCTTAACTTTTTATGTTTTACTACTGACCTGAACCTGAACCTCTGGATCT
AAATCCAGACCTGAACCTGAACACTGGTTTAGGTACACAGCACTAATCTA
GAGTCTAAATTATGGTTTATAAAGAATTTTTTCTATTAAGACTTTGAAGT
GTGTAGAGGTGTGTTAAACTCTTCTTTGTTGTGACAGTATGATGCATGTG
TCGAACTCACATTTAAAAAATTGATACATTCTTGTCAAAACCATCATAAT
TGTAATTGTAATTATTGTAAATCATTGTAAACCATAATCCTTGCTGCTTG
CTCAACATCCTGAGAAGCTGGTCATGTGATGTGCTTCAGCCAATCAAGAT
GCTGTATTTGATCATGGGATGTCCATCAGCCAATCAAGATGCTCTATTTT
TGATCATATGATGTGCTTCAGCCAATCAAGATGCTATGTTAGGTCATTGA
GGATGATGACCTTGCAAAATGAAGGATGTTCTTACTAGATGTTTAAGAAC
TTTTCAGACAGGCCCTGTTTCTTGCAGGAGTTGGCTAAGAAACTGCAGGA
TAGAGAAAGAAGGCGGCTGGAGAGAATCAGCGCCAAGAGGAGAGAGAAGG
CCATGGAGGCTGAGAAGTACCACCAGGATGCTGCGGCCGCTAGGGATGTC
GGTCAGTAGAAGTGAATCAAAGTGGTCTCGATCATACAGGGCTTGAAATA
CTGGATGCATGTGCACCTCTGTGCACCCAAAATTGGAGCTGTGCACTTAA
TTTTTTACTCTGGGTGCACCAGTGCACCTAGGTATTTTTGTACCCTACAG
GGTAACGGTACTATTTTTCACAAGTATTCAAAATATTATTGAAATCTAAG
TATCAGAAAAAGCAATATAACCTTGTTGCTACTGTTAGCTACTGTAAATT
AAGAGAATTACAGATTGAAGTTCTTAAGAGAGGCAGTAGCATTAAATTTG
TAATTATGTTTTGCTGACATTCAACTATATTTTATGTTGTGCACCCAAAA
TTCTTTCTGTGCACCTAATTTTTTTGGTTTGGTGCACTAGAAATAAATTT
CGAGCTCTGTCATATCAGTTTAGCTCACTGAATCTTCTACTGAGTATAAC
CCGAAAGACGCGATATGTATATTATTCCTACTTATACTATAAGTTGTTCA
TTGTACCAGGGAAATTTTCTTTAGCTTTTATTGACAAGCACAGTGAATAT
TGGACCACAGCTTAATGTCCCTTCCGAAGGAGTAACCGTTTCAGGTAGCA
TGGGAGTCAGACAAGCTCTACCCCGGGATGCAAAGTCTCAACCTCCATGT
CCAGAGGACGAGCTGCTCTTAGTCGTACCCATGTCTTAACTCATATACCA
ATGGGGCTGTTTCACTATTCAGTTAATCAGATTCTCCTCTAGTGTCTTCC
AAAAGTGTCCAGTGTTATCTTCTTGATAGAAGAGTTATCAAGGATCTTCC
TTTTTCTTCCCACCTAGGTGCGTCAGCTGACAGTCTGGAGACCGACCTCC
AGCTGATGAAGGTGGGGTCACCGCGCCGTACCGTGGAGCTGCCGCCCGAG
GGGTACCTGGACGACTTTGTGGAGAACAACGCGGACCCGGGGCTGAACGA
CGACAGCTGGGTGCCGCCGGAGGAGCGCGAGGAGGGGGAGGGGCAGGCCC
AGGCTGACGACGTGGTTGTTCCGCGCCCGTATGAGGCTGATGAGGTAAGC
TGGGTTTCCTTTTGTTTATTCGTTTAAGCCTAAGAAAAAAATGTCTGTAA
CAAAATTTGCTATATTGCTTGGATTCTGTTTTGAATTATCATCACTGAGA
TGTCAGATCCAAAATTTTGTGTCCCTTTCCAGTGGTCGACCCCAAAAAAG
GCTAGAGTCAGCAAATTTATTACTATGGTCGGTCGGGTTCCTATGCCTTA
TTTCGATACCTTTTAGTCATGGGTTGTTTTTCTTTTAATTGTCACCATGT
AACAAAACCAAAAGGCCACATAGGCACTTTGGTTCACCCAAAATTGCAGC
TGTGCACCTAATTTTTTACTGTCAGTTCGCCTGTGCAGGTATAAGTGTAG
GTTGCGTAGTACGTAAATGTACTACCGGTATTGTACACAGCATACTCTGG
ACACTTGTGTCAGAAAAAATGATAAACCTTTCTTGTATTGCTTACATTGT
GCAACCAAGATTTCCTTCTGTGCACCTACATTTCTAGGTTAGAAAATATA
GGTGACTAACTGACTCAATAGAAGACTGCTCGTGAAGAAGTATCACGTTC
TTGCTATGATTCAGATGGATTCACTGCAGGTGGTTGGAATAATTGTGAGT
GTGACATGATGAGTGTTACCAGGACCCTTCCAAATACCAGCATTAAAGCC
TTGAATAATTCTTCCCCCAGGCCTATGCTAGACTTCTGCAGGAACAGGAA
AAACAAAACGTGAATGTGTCCAGGAAAGACAGAACTGTCGCCTCGACTGC
ACAGGATGAGGTAGGACATCCAATGTACACAGTAGATGTACCTGTAGATT
GTTTGCACCTTTGAGTATGGCTTAATGTATTGAAATTTTGAATTTTAATT
TTCCATATCACACGGGGTTCTACTTGTATCACACGGGCTTCCATAGAATA
TTTAGAATACATTTCGAGCGAGCCGGTTGTGCCGCTGTCGAAAATTCGAA
TACCGGATACATGTCTGTCATGTCTCTTTTGAAATGCTGACTGGATTATG
CCTTTCCTTACATTGCAGGAAATAGCCAGATATCTGCAGGACCGAGAAAG
ACAACTATTTGTGAAAGGGATACGAGAGAGGGCCAAGATTAAACACTCCA
AATCAGACCATTCCCATGTAGGTCCAATCAGTTCATGTGTTGTTCAGTTT
TGTGTTACAATGCAATACAATTAGCCTCTACCTCATGGCTGGAAAAATAG
TAGAAATTGGCCAAATAGAGTAAATGGAGCCGACTTCCATACCATTTCTA
CTATTTTTCCAGCCATCCGCGGAGCGTGGTAGAGGCTACAATACAATAGG
AGCACATCAATAGCTTGTGGCAATTTTTCAGCTAGATGAATGAAGTGGGG
TGAAGAAGAAGATCACTGTATCAGAACGTTACTGACAAGTTAGAATATGA
TTCTCAATCTAAACACACATACCCAAAATAGTTACTCTAGCAACTGGATA
AAAATTTTGAAACAGATGTTTCAGACAGCATCTGCTGTCTTTCATCAGTG
ACTAAGGAAAGGACTGGGAAACCAGGTTTTATACCAAAACTCTGAACACA
CATTGTTATTTTCTTGAATATGTGTGTAACTTGTTGGGTAAAGTTGTGAT
GGAAAATATTTCTTCCCACGCTACTTTTACCTTTACTCTCTCTCTGTATT
TTTAAAAAATTTTTAAGAAGTTTTATCAAAACCCTCTTGTTTTCCCCTTT
CTCGGGAATGAAAATATTGTGACCGTACCATCAACTTCTCGCGATAGAAT
AGACTTAAAAAATCATTATTGTCTAAAACATGTTGCTTGAGCATCTTGCT
TTACCTCCACAGCTTCAACCTAAACTACATCAGGATTACAAGAAACATGC
CTCTGCACCTGCGAGTAACATAGTACGGGGCAGTAGTAGTGTGCACGGTA
CGAGTGACTCCACAGCTGGTGCAGCTAGCGGCTCGCTGATTGGTGCAACG
GGTGGCTCCGGAACCGGCTCACACGACAGACGCGCCGACTCACGGGGATC
TAGCCTCGGAAGGAACGAAACCATAAACACAGAGGTGAAGGTATGA Coding sequence (CDS) from alignment at Sc0000020:932628..940223- >Blg03217.0 ID=Blg03217.0|Name=Blg03217.0|organism=Branchiostoma lanceolatum|type=CDS|length=1170bp|location=Sequence derived from alignment at Sc0000020:932628..940223- (Branchiostoma lanceolatum)
ATGTACTTAATATTTACTATGAAGGATGAGAACGTGATCCCCAGCCAAAT
CCGTAAGGAATGGGCAGTACGGGAGGATGGTGCGTTTGCCATGCAGCTTC
AGGATGAGGAAATTGAGCAGCATTACTCGGGAAACATCATTCGGCGCCGT
ACCGTACGGAAGGACGTCGTCGTGGCGAAGGATGCGCAGCAGGAGGAGGA
CCGCGTGGTTCAGGAGGCCATCATGAAGCGCATCGAAGAACAGCGGAGAT
TAGAGGAACTAGACCGAGCTGTTGCAAGTAGCATGCAGGAAGCCCTGGAG
AGAGAACAGGAGAGAAAAGTCTTCCAAAAAGAGGCAGACGAGTTGTGGCT
GACGTCCGAGCTCGATGCACAGAGGCGACAGGAGCTAGAGGATGAGGAGT
TGGCTAAGAAACTGCAGGATAGAGAAAGAAGGCGGCTGGAGAGAATCAGC
GCCAAGAGGAGAGAGAAGGCCATGGAGGCTGAGAAGTACCACCAGGATGC
TGCGGCCGCTAGGGATGTCGGTGCGTCAGCTGACAGTCTGGAGACCGACC
TCCAGCTGATGAAGGTGGGGTCACCGCGCCGTACCGTGGAGCTGCCGCCC
GAGGGGTACCTGGACGACTTTGTGGAGAACAACGCGGACCCGGGGCTGAA
CGACGACAGCTGGGTGCCGCCGGAGGAGCGCGAGGAGGGGGAGGGGCAGG
CCCAGGCTGACGACGTGGTTGTTCCGCGCCCGTATGAGGCTGATGAGGCC
TATGCTAGACTTCTGCAGGAACAGGAAAAACAAAACGTGAATGTGTCCAG
GAAAGACAGAACTGTCGCCTCGACTGCACAGGATGAGGAAATAGCCAGAT
ATCTGCAGGACCGAGAAAGACAACTATTTGTGAAAGGGATACGAGAGAGG
GCCAAGATTAAACACTCCAAATCAGACCATTCCCATCTTCAACCTAAACT
ACATCAGGATTACAAGAAACATGCCTCTGCACCTGCGAGTAACATAGTAC
GGGGCAGTAGTAGTGTGCACGGTACGAGTGACTCCACAGCTGGTGCAGCT
AGCGGCTCGCTGATTGGTGCAACGGGTGGCTCCGGAACCGGCTCACACGA
CAGACGCGCCGACTCACGGGGATCTAGCCTCGGAAGGAACGAAACCATAA
ACACAGAGGTGAAGGTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg03217.0-exon-Sc0000020-1570713199:940175..940223 | Blg03217.0-exon-Sc0000020-1570713199:940175..940223 | Branchiostoma lanceolatum | exon |
| Blg03217.0-exon-Sc0000020-1570713199:940014..940076 | Blg03217.0-exon-Sc0000020-1570713199:940014..940076 | Branchiostoma lanceolatum | exon |
| Blg03217.0-exon-Sc0000020-1570713199:937925..938063 | Blg03217.0-exon-Sc0000020-1570713199:937925..938063 | Branchiostoma lanceolatum | exon |
| Blg03217.0-exon-Sc0000020-1570713199:937499..937589 | Blg03217.0-exon-Sc0000020-1570713199:937499..937589 | Branchiostoma lanceolatum | exon |
| Blg03217.0-exon-Sc0000020-1570713199:936744..936797 | Blg03217.0-exon-Sc0000020-1570713199:936744..936797 | Branchiostoma lanceolatum | exon |
| Blg03217.0-exon-Sc0000020-1570713199:935723..935846 | Blg03217.0-exon-Sc0000020-1570713199:935723..935846 | Branchiostoma lanceolatum | exon |
| Blg03217.0-exon-Sc0000020-1570713199:934680..934906 | Blg03217.0-exon-Sc0000020-1570713199:934680..934906 | Branchiostoma lanceolatum | exon |
| Blg03217.0-exon-Sc0000020-1570713199:933914..934003 | Blg03217.0-exon-Sc0000020-1570713199:933914..934003 | Branchiostoma lanceolatum | exon |
| Blg03217.0-exon-Sc0000020-1570713199:933557..933655 | Blg03217.0-exon-Sc0000020-1570713199:933557..933655 | Branchiostoma lanceolatum | exon |
| Blg03217.0-exon-Sc0000020-1570713199:932628..932861 | Blg03217.0-exon-Sc0000020-1570713199:932628..932861 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000020 | genome | Sc0000020:932628..940223 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg03217 |
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