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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000020:2149878..2154758- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg03213.0 ID=Blg03213.0|Name=Blg03213.0|organism=Branchiostoma lanceolatum|type=mRNA|length=4881bp|location=Sequence derived from alignment at Sc0000020:2149878..2154758- (Branchiostoma lanceolatum)
CGTCACCCTACTTATCTTATGAACGGAAAAGACGGAGAAATTGGGTGAGG
AGCCTGTTATTGTGAAGGGACCAACAGCGGGAAACTCGTCAGAAAACCAA
CAGTTTGAAGTTTTGTGAAGGATTCTATGGACGGACCAGAATGTCCACAG
TGATTTTGTTCGTGATTTTCTCCCTCATAGTTCAGCGTATTCCTTTGGGT
AAGTACATCTCTTTTTTATTGTCTTGTTGATAATATTAGATTTTATGAAT
GTATTTAACAGTACTGTAGAGAATTATGTATCTTATAAAGGCATAGATTT
AAAACTTACATAATCAAGTATGATGAACTCTGATGGGTGAGATTTTACAT
TAACCTGTTTCTGGTGTTGATAGAACAGTATTTTGACCCAATTTGACACA
TATTTGGTAACGTTCCAAATTGCAAGCATACAATACATTATTTGTTACAC
AATTTCTAAACCAGGAACATAGAAGCATAATATGTATATATACATTTTGT
TTTCAAGTTAGTATAATGCAACATACACAATATTGATAACATGTAGTAAG
AGGAACGGAAGGGGCAATGGCGGTAACGGAAAAGGTCACCTCCTCCTACA
AAAGAACAGTCCGTCCGGTCAAGAGCTACTCAACTGCAGTCAACACAACG
TTTGGGTTATCTATTCGACAAATTAGAGACGTGGTGAGTGTTTTACATCA
TGATGGTTGTGATTTTCATGCTAATTGCATTGTTGATGCCGTTCTTTCTC
GCTTTGAATATCATGTAAACATTTAGTAGGTGAATGAAATGCAGGTGTGA
ATGTGGGTCACTTTGTTTAAGTTCCAAATGTTATGTTCCAATTGTGTTGT
TCATGTCGCAACATTATTGACTGTATTTTATCTTCTCCATAGGATGAGAT
TGGACAGCGAGTTATAGTATTTACTTGGGTGCGGATGGTAAGTTTTTGTC
TTCCTTCATTTGGCAACGTCTCAGGGGCGGAGCTATTATCATAGTACTGC
GATTAAGTTGAAAATATTCTAGAAGTTCCGCGACCCCTTTCAAAGTTTTT
TTTAGCAACCGGGAAAATGTGGTTGTGGGAAGAACTTTTGGGAACTGTAT
TTTCAAAAATCGGTTAGCAGCTCTTAAGTTTAGGGCACATTGTTTCAAAT
GAGCTTCTATTTCTGGATCATATTATTGATTAGCAAGTGGGTGTGCTGTT
CGACATGTTTCAATAATTACTATCCTAATGTAAGTATTGCATCAAACATA
TTGTTTTACTACAGCTCTGGAGTGACGATTACCTTCAATGGGACCCAGAA
GAATACAACGGTACAACAGAGATACATCTACCATCGTCGGAAGTGTGGCA
TCCAGACATCTACCTACTGAATAAGTACGTCAAAATGTTGTTTTTGTTCT
ATTAGAATGGTAAATATGACATAGGGATATTGTTATTAATAATATAAATC
ATTTACCTTTTTCTACCTTATTGTTTTAATACTTCAGTTACCAGCTTGGA
GCTATGTCTCGAATATGTATACATAAATACGCTAGTATTCCTATATATTA
ATGTTTATTGACTTTGATAGCTTAAATGTATGTGGTGCACATTCTGCTAA
CTTAAATGTAATCAAGGAATACACTGAACAAATATTTCTTGAATATGTAT
TAAATCGGACTTTTACTTATTCTTACAGTGGAGACTTTGAGACCGACGGA
CGTCTTTTGGAAACTACAAACATCATTGTGCAGAATAACGGATCTATGAA
ATGGATTTTTCCGCAAAATTTCATATTTTCCTGCAAAATGGACATGGCTT
ATTTCCCTTTTGATGACCAGACATGTATGATGGAGTTCGGGTCATGGAGC
TATCACGGATTACACTTGAACTTGTTTAACGATTCCTACGTACTCGATGA
CATAGCATTAGACTTCGGTGAATGGGACGTTCTGGAATTAACATGGCACC
GAAAGGTTGGTACTATCATTTCTAACTATATCGTAAGTCACGAATCAACT
AGAACCAGAAGTCGCATTATGTAGAATTTAAACTGTTTCATATCCAAAAA
AATAGACTCACCGGAATTTTCAACTAAATCTTCAGCTTTGTGACCCAATC
AGTCTTGACACGTGACTTTATGCACGTGTGACGTCAGCTAAAGGTCAAAG
GTTGTCAGAAGTCGATATCGCCTCTCAAGCCAGAAGTAATTTATCGCTTG
TTTGATACCTTGGACATAATTCATAATAATAGTAAGAATCTCCTGTGTAG
TCCCATGTCTTTGTTGTTCATTTTTGACAGATTGTTTTTAACCAAATTGT
CTATTTTGTCATCAGATAACATACCGTGAGTGCTGTGACGAGCCGTTTCC
AACACTGGCCCTGAAGTTCCACCTCCGGCGCCGTATTCTCTACTACTTCA
TCAACCTTCTGCTGCCCTGCATGGTCCTTCTGGCGGTCAACCCTTTGGTG
TTCCTGTTACCGGCAGGGACCGGGGAGAGGATCGGCTTCTGTATGACCAT
CCAGCTGTCTGTCGTGGTGTTTCTACAGGTGGTGTCTGAGCACACGCCCC
AAACTGCGGATTCAATTCCCTTGATTGGTAATATTCATTTCGTTCTGGTA
AAGACGTTGACTGTTTGAAAGAAATTATGGGTTTGGCTGTTCAAGACGTC
AAATGTGCAGGGCTGTCTAACTGTCTAATGGCTGTAAGAAGGTTCATGAT
TCTAAGTACGCATGACCAGCAAAGTACATTGCTGGTTATATGCCGCAGGT
AAAGGCCAATAACATGTAAACGATTCTTGTCTCGATCCTTTTCTCGATTT
GCATGATGACAATGTCCAGGCATGTTTTGTTCATGTCTCGGGGGCATTCA
CCTTTGACATATTACCCATAATGCATTTCACCCTACATGCGTACTTAGCA
TCGTGGACCTCCTTATTGCAAAGGCAACGAAAATGGAATTGGAATTTCTA
CATGGACAGAATAGCAATCAATAACAATACAATAAGACTATCACATATAT
ATGTATTCTAGCATGATGTGGCAAATACGTTGATGTTGTCATTACGTTGG
TATTTAAATACAAATTCCTTATCCTTATCTTTCAGAACAATTCTTTACGG
CCACGATCTTCCTTGTGGGATCAACGGTGATGACAAACATCTTCCTCCTG
TACATCCACTACAAGGGGATGCTGCACATCCCGGTACCCAGCTGGATGAG
GACGCTGGTCTTGATCCATCTGGCCCGGCTAACAGGGATGACCGGAACCG
CTCAAACATTCTCCAAAATATCCCCCATGGATTATGTGGAGGACCTCATC
ATAGAAAATATGGACACAGACTTTGATGTAAGTCTTTTCAAAACTTACCC
CTGCTTGAAGTTTTCTGTGGGCTTTACTCTTCCGTATATCGTCCATATTT
ATCATGTTCTGTACAAAGACATCCATAAGAGAGCAATCGAATGTGGTATA
ATATAACAGACAACACTTTATACAGTCGAAAATACAAGTAGTTGCAAGCT
ACATTAAAGGCACTTAAAAAGTATAGACTCAAGGGCACATACTACAGTCT
AGACGAACAATTGATTGTGACTTATATAATATTGAATATTATCGTGAACA
TAATAATTATTGCAGTGCTTCTATTGTCACGGTTTGTACCTTTCCATTCA
TTACACTGCGAATATACGTTTCCATTAAATATCTACCGTGCTACAGAATA
AGTCTAACCGCATGCTTAAAACAAATGGATAAAATTCCTTTCCCTCCTAC
CGCGAAAGTATTTGAATTTATTTGTTCTTTCGTAGCATTGATTGTATCAT
CTCATGTGCATGTGCGTTGTATACAGTCTCGGCCCCCGTCCATGATGTCA
GGTCTACACAGCGTCAAGCCGTCCACAACCGCTTTGGAAAAAGACGACTT
CTTACACCATAAAGTGGACCTTCTGTACCGCAAGCTTGCCGATACAACGC
GCTCAATAGACGCCAAAGTCAGGACTATGTCTAGGCAAATGACAAGACAA
AGTACGCAGTACTTTTTAACATTTGAATGGAGATGTGTTGGCCTAGTTTT
GGATAGATTTTTGATGTATATGACTATTCTTGTGACTATAATAATCTCTG
TCGCGATTTTCACACAAGCCCCTCATTTCTAATATACTGTTGAGAAGAAG
CTCTACCTTTCTTCATAAAAATCTAAAAAGAAAATGTAGGAAGCTTTGTG
ATTGATTTTTTTCAATTTGAGAAATCCCTGATGACTTATATATAAGTTAT
CACCGTTTGGTATATTAAACAATTTAAGGACCTAGTCTGTTTTTTATTTT
TGCAATGTTTTGTTCAAACAATTGGCAGGGTCTGTATTTCTAACGTGTTC
CTTGGTTGAATCTAGTATAGTTGATTGATGCTCAATACATATACTGTTAT
TTTGTCGTTTGACATACCTTTATCCGACAGCGTCGTTATGTCGATCGGTC
ATCGGGAGATCTCACCCTTGAGTTTAGTACGCAAACTTAACTCGGAGTTG
CGTTTCAGAAATTTTCTGGAATGGTAGAAAGTTTTACTGTGACCTCGTTC
AGACCTAAATCAAATTTAAGTAACATTAACGTCAAAATTAGAACATCATG
CATAACGTAAAAGTATGACTGAAAATACAACAAAGCACACAAAGTGTAAC
AACGTTTTTTATAGATGGAATTTATTGAGCGCTCTGTCAAATAGGTCTCA
GCCCGGTCGCAGCTAAGACGCCGCCGTGGTAGAAAAGTAGTGTTACCTGG
ACTTTTGATGACGAAAACAGCTGCAGATCAGGCGCCCTGTATGTGGTGAT
AGCTACGTGCAACTTAGGTGAAGATAAACATTGACTAGTATAAAATTGAT
TTAAATGAGTATAATTTCAAAATGAATAAAC Coding sequence (CDS) from alignment at Sc0000020:2149878..2154758- >Blg03213.0 ID=Blg03213.0|Name=Blg03213.0|organism=Branchiostoma lanceolatum|type=CDS|length=1437bp|location=Sequence derived from alignment at Sc0000020:2149878..2154758- (Branchiostoma lanceolatum)
ATGTCCACAGTGATTTTGTTCGTGATTTTCTCCCTCATAGTTCAGCGTAT
TCCTTTGGTAAGAGGAACGGAAGGGGCAATGGCGGTAACGGAAAAGGTCA
CCTCCTCCTACAAAAGAACAGTCCGTCCGGTCAAGAGCTACTCAACTGCA
GTCAACACAACGTTTGGGTTATCTATTCGACAAATTAGAGACGTGGATGA
GATTGGACAGCGAGTTATAGTATTTACTTGGGTGCGGATGCTCTGGAGTG
ACGATTACCTTCAATGGGACCCAGAAGAATACAACGGTACAACAGAGATA
CATCTACCATCGTCGGAAGTGTGGCATCCAGACATCTACCTACTGAATAA
TGGAGACTTTGAGACCGACGGACGTCTTTTGGAAACTACAAACATCATTG
TGCAGAATAACGGATCTATGAAATGGATTTTTCCGCAAAATTTCATATTT
TCCTGCAAAATGGACATGGCTTATTTCCCTTTTGATGACCAGACATGTAT
GATGGAGTTCGGGTCATGGAGCTATCACGGATTACACTTGAACTTGTTTA
ACGATTCCTACGTACTCGATGACATAGCATTAGACTTCGGTGAATGGGAC
GTTCTGGAATTAACATGGCACCGAAAGATAACATACCGTGAGTGCTGTGA
CGAGCCGTTTCCAACACTGGCCCTGAAGTTCCACCTCCGGCGCCGTATTC
TCTACTACTTCATCAACCTTCTGCTGCCCTGCATGGTCCTTCTGGCGGTC
AACCCTTTGGTGTTCCTGTTACCGGCAGGGACCGGGGAGAGGATCGGCTT
CTGTATGACCATCCAGCTGTCTGTCGTGGTGTTTCTACAGGTGGTGTCTG
AGCACACGCCCCAAACTGCGGATTCAATTCCCTTGATTGAACAATTCTTT
ACGGCCACGATCTTCCTTGTGGGATCAACGGTGATGACAAACATCTTCCT
CCTGTACATCCACTACAAGGGGATGCTGCACATCCCGGTACCCAGCTGGA
TGAGGACGCTGGTCTTGATCCATCTGGCCCGGCTAACAGGGATGACCGGA
ACCGCTCAAACATTCTCCAAAATATCCCCCATGGATTATGTGGAGGACCT
CATCATAGAAAATATGGACACAGACTTTGATTCTCGGCCCCCGTCCATGA
TGTCAGGTCTACACAGCGTCAAGCCGTCCACAACCGCTTTGGAAAAAGAC
GACTTCTTACACCATAAAGTGGACCTTCTGTACCGCAAGCTTGCCGATAC
AACGCGCTCAATAGACGCCAAAGTCAGGACTATGTCTAGGCAAATGACAA
GACAAAGTACGCAGTACTTTTTAACATTTGAATGGAGATGTGTTGGCCTA
GTTTTGGATAGATTTTTGATGTATATGACTATTCTTGTGACTATAATAAT
CTCTGTCGCGATTTTCACACAAGCCCCTCATTTCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg03213.0-exon-Sc0000020-1570713199:2154561..2154758 | Blg03213.0-exon-Sc0000020-1570713199:2154561..2154758 | Branchiostoma lanceolatum | exon |
| Blg03213.0-exon-Sc0000020-1570713199:2154076..2154212 | Blg03213.0-exon-Sc0000020-1570713199:2154076..2154212 | Branchiostoma lanceolatum | exon |
| Blg03213.0-exon-Sc0000020-1570713199:2153822..2153866 | Blg03213.0-exon-Sc0000020-1570713199:2153822..2153866 | Branchiostoma lanceolatum | exon |
| Blg03213.0-exon-Sc0000020-1570713199:2153385..2153494 | Blg03213.0-exon-Sc0000020-1570713199:2153385..2153494 | Branchiostoma lanceolatum | exon |
| Blg03213.0-exon-Sc0000020-1570713199:2152804..2153080 | Blg03213.0-exon-Sc0000020-1570713199:2152804..2153080 | Branchiostoma lanceolatum | exon |
| Blg03213.0-exon-Sc0000020-1570713199:2152182..2152443 | Blg03213.0-exon-Sc0000020-1570713199:2152182..2152443 | Branchiostoma lanceolatum | exon |
| Blg03213.0-exon-Sc0000020-1570713199:2151432..2151673 | Blg03213.0-exon-Sc0000020-1570713199:2151432..2151673 | Branchiostoma lanceolatum | exon |
| Blg03213.0-exon-Sc0000020-1570713199:2149878..2150932 | Blg03213.0-exon-Sc0000020-1570713199:2149878..2150932 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000020 | genome | Sc0000020:2149878..2154758 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg03213 |
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