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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000037:1342029..1349602+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg02843.1 ID=Blg02843.1|Name=Blg02843.1|organism=Branchiostoma lanceolatum|type=mRNA|length=7574bp|location=Sequence derived from alignment at Sc0000037:1342029..1349602+ (Branchiostoma lanceolatum)
AAATTTCTCATGGTAACAGTAGTCATAGGAACCTGTTGAAGATGTCAACG
TATTTTACAAAGGCGGCCTCGAATTGTATTTCCTGCTATCTCTTTTCTCG
TGAAGTTGTTTTTGACAGAAAGTTGCCACGTATGACCAGGATATATCAAC
ACGACGCTGTCACTCTCCTCTCAATCTGAACCGGCATTGTTGTGTCTGTG
TGCACGACTATACACCATTCCCGAGCACGGATTCTTCACTCTGAGTTCAA
ACTATCCTTAGGTCGAAATGTTTCTCCGCGTTCTCCTTTGCTTTGTAGTT
GTAGTCAGCCTCTGTGCTGCTAAGGACATAGGGTATTACTCCGCGATCGT
GCGGGTGGAGAGGCTGCTGCTGGCGGAGAGGAAAATGGTCGGGAAGGTCA
AACAGTACATCAGCCAGGGCGGGCAGGTGACTGGGGATCTCAGGAGGTGA
GATTTCATCCTGTTACACAAGTTATAGTATTTACATAAGATTGCCTTGTG
ATTGATCTATGTTACAGTAACTTGCATTACTTAAAGTCTATCTCTTTACG
GGTATTCCACCGATGCAATGATTGCAAGAGTCCACAAATCAGAATAGCAC
TTGCAAAAGTGTGAAATTTGGAAATTTCCGACAGGAAAATGATCTTTTGC
TTTGTTTTGAATTGTCAGTTTTCATGCAAGTAGAATGATTTTAGTAATTA
TTCTGGATATTAATGAGGCATACCTGCCAGCATGTTACAATCCTGTGCAT
ACACTATAAACAAAAGAACAAAGGAATTTCGAGATTCAGAAAAAGCCGGC
GTCAAAATATCTCAAATCTGTAAGAGTTGCAAAATGACTTTGTTACAATA
CATCAGGCACATATCATTCTGTATCGTCACTTTCAATTGGACGAATATTA
AGCGCATGACATCATTTTTGTGCAGTTGTACGACTTTGTGTTTGTTTTGT
TGAACATGTAAAAACATATACCAAACCCACTATTTTTCAAAGTGGCGGAT
TTATGTAACCTGGTGGGTTAATATCAACAGGGATTACTACTTAAATTGAC
ATCAGTGAAACAAATAAAATGCACTGAATTGATGCTATGGTGATGTCATC
GTTTTCTGACTGATCGTAGTGCCATGGCGACGGCCTGGGTTATTATTTAT
TGATATAAGTTTGTTGCTATTGTTCGCCTCCCGTCCAACGGGAGACCAAG
CAAGCTAACGTCCACTGAAGGTAGTCCGTGGAGGGGGTACTGTGGAACAA
AAATTGACCCTGGGAAACCCAGCTGACCGAAAAACAACAATTCAGGCCTA
GATGCCCACCCTACCCGCCATAAATCCTGAAAAATAGCACTTACAGTATT
GTCAACGGTTTTAGCGCATGTTTGCCAGTGCGAAGATTTCTTCTGGTCAT
ACGAGAGTGGTTATCAAAGACAAATTAGATATCTAAGGTTTTTTTGTTTC
TCTCATGATGAAAACGTCTACATTGTTAGCACCACAACGATGCCGATTAC
TATAGTACGGGTAAGACACGCACGGACATTACAGAAATGCCTGAAAAATT
CTTGAGAAACGAACGTATAATATACTATCTGGCTACCCACTGAGGCGTAC
AAGTACCGCATGTCATTCTAAACGTACTAGAATTCACAAAAATAGGTAGC
TGGGGAACCATTGAAATGAAATGTGATATAGGACTTATATTGTTGCATTC
CAGCTACGTGGACAGCTATGACGACAGCTGGCTACATCCGCCTCGGGATG
ACCCCTTACATTTTGCCCACCATCCGGTTGGGGCTTATCTTTTGATCAAG
CGACTCAGTCAAAAGCATATGAAGGGCGTCTTCCAGCAGGCTCAAGATCT
GATTGGTACGTGTTATTCGAAGCGTAGTGTGTGTGTGTGTGTGTGCGCGC
GCGTGTACACGTGTGTGTGTGTGTGTGTGTGTGTGCGCGTGTGCACGTGT
GTGTGTGTGTGCGTGTGCGTGTGCGTGTGCGTGTGCGTGTGCGTGTGCGT
GTGCGTGTGCGTGTGTGTGTGCGTGTGCGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAAAGCATAAC
TCGAGAAGTCATAGATGGATCCTTATGATACTTGGTATCTTGGTAACGTT
AGGTGTTTGCAAAATGGTCCCCAGTGGCTTTTTAAGGTACTGCAGCCCGA
ATTTCGGTCCTTTTTTTCATTTTCATTTTTTCCTCATAGAGAAACCAAAC
ATACTGGTTGAGCTCCCGGACAAGGAGGATCTGGAGATGTCCGCGTTCGC
ACTGGTCCGGCTCCAGCTGGTCTACAACCTGGACATCAACAGCCTGGTCC
AGGGACAGGTGGTCATGACGGTGACGTCACCTCAGTCCGCGGTGCCGCAG
CACATTGCAGTGACCGGGATGGAGCCGACACTGACGCTGGACCTGTCTGA
CACCATGTTCATCGGGGACGTGGCATGTCGGCAGAACGACTCTGAGAGCG
GCATCTTGTGGTATAACTTCAACTTGGCCTCCGCTGACGGGCTGAATAGC
AGGGTTAAAGCTCTGTCAAGGATAGCCAGTGCCCACTCTAAGGTATGTTT
AGTCTCAACCCTTTGATATCACGAGCAATAATGCGTATTTACTTTGCTAT
ATGTGTGACAACATCTTTGTTGGTTATCGGATATTTCTTTCTGACAGAAT
TTTCGTTATCCAACAGATGAAGCAACACGAGAAAGCCTTTGCTATATATC
GGGAAGCATTGGATCTTGGTAAGCAAAACTAATCAGCTTTCCGTATCTTC
TATCTCATTTTTGTGTCTCCCATAGTCCAGTCATCTTGTCTTTGGTTATG
TGACGATCTTTCTTCTCTCAACTGTTTCCTTTTCCTAATCCATCGTCGTG
CAATTCGGTTCATGATAAACATGTTCATTTGTATGATTCCGAATAGATTT
CACAACAATATGACGAATATGTCTTTGTTGTTGATGTTCTTTTTTGTTAA
TCTAATTGTTTGGGTAATATGTGGACAATTATACAGGCCTTCTTTCCCTT
TGAGAGTTCTCCAGATGCCAACGGTAAACTTCTCGAGTGAATTCACATAA
AACTTCATGCAAATACATTTTGTTAATTAAAGAGACACACACCATGCCAA
ACAACAGCTTTCATCTGCGCTGTTTGTGGCAAACACTGCAAGAGTAAAGC
TGGACTCGTCGCCCACGGACGAGTCCACCGACGCTGAACAGATCGTCCGG
CAGGATGTAAAGGAGCTGATGACATGAATGAAAGCATGACCGTGTTCGTA
TGTTACAGATCCTGACAACCAGATCCTTTACGCGGACTATGACGACGCTA
TGCGGCTGGCAGCTCTCGGCGGCACCGCGGCGGATGAAGCACCAGCCAAG
TTAAAGGCCTCACTGGCCAAGTCCAGACACCTCTGTCGTCTGGACGTTCT
TCAGGTTCAATTACAATTGAATTCTACCATGTCTATAGATGTATTGTTCA
GCTACTGGTCGCACTTTTGATCTTAGCATTCACAATTTGCGAATATCTAA
GTCCGTATGAGCTCCATAGCGACATTTGTTTAGTTTAGGTTAGGTTTGCG
GCCGAAGAACTCATTCTTCTGTTCGATAACCAGGCTGCACAACGGTCAAA
GTCAGGAAACTTTAACTAAACCAACAATTGTTAATGCGTAACTCATACGG
ACTTGAATATACGCTCAAGTAGTGTGAAGGGGCCCTTCGCAAAATATTTA
AAAAAAGTTTACCAGACGTTCTGTTGTATAGAATGTAGCGCCTCGTCGAG
GTCTCAAGTGTCGTTACGTCCGAGACAGCCCACACCTTTACATCAGTCCA
GCCAAGATGGAGGTTCTTCACAGGAAGAACCCTCGCCTTGTCATGTACCA
TGACGTCATCAGTCAGAACGAGGCCAGGACATTCAGGAGTACGGGATTCC
CGAAGGTTGGACATTTTGTCCGTTTTTCTTCTTTACTACTTTCCAAGAAA
GCAGCTAAAGTTAGTGCATGTAATTGGATATTTGACAGTAATTTTGTGGA
CTTTGTGTAAGTGAAAAGGCCCAATCTGAGGAATTTATAAGCTTTAAACC
TCAATCATGATTTCTTTGACCTATCTACTGCTTAAATTTTGTTACAGTTT
CGACGGACTCTGGCTTTGGATGGTAAGGGTCGTGTCTACATCGACATCTA
CTCAGTCAGTGAAAGGCAAGTAAAAGCATAGTTTTCATAACATCATGCTG
GAATTGTGGTACATATGAACGTAGGCATGGATGTACCATGATCGAGGCTT
TGATCATACAATGTAGTCTATTGAGTTACACGTGTTTCAATTCTACTTTG
ATACTATTGATAGTGTTTTACTCAGTAAGACTAACTTTCTATCTGATACA
TCTGAACCTCTAGCGGTTCCATCCGTGATAAGGAGGACTCGTTTATAGGG
AAGATGAGCAGACGAGTCGGCCACCTGACCGGTTTGTCCACGGGACCGCC
GCATGCAGAGCCTATGATGGTGAGACAATGCTGAATTTTTCATTCGTAGT
ATTCGGTTTGAAACGGAGATGGGCGACGCCCAATGCACCATCGGTGCGGG
AAAGAACTTTGACTTTGAGTATTCGGTTACCAATGCATCATTACCACATT
CAAATGTGCCACTTTCCCCTCAGCCTTTTGTTACGGTATGGCAACTCAAC
TACAACGTAATAAAAATCAGAGATGTGGCTTTGACCTTGCTTTGATCATC
ACTTGCTATCAATGTGTTTCATGATACTTTTAAAGATTTCTTCAATGCGT
TACGTTGTTGTTGTTTCTATAGGTCTTTAATTTCGGGCTAGGGGGCGCTA
TTCAACATCACAAGGACTACATGGCGGTAAGGCTCAGACCGTGTTGTATT
GCGTTGTATTGTGTTGTTGTGTTGTATTGTGTTGTGTAGTGCTCATTGTG
TTGTATTGTATTGGTTAGTTGTGTTTTGTTGTGTTGTGTTGTAGTATATT
TCAGGGAGTGACGTTACAGCTTGGACCTGAGTGAAATATCACATACGCAA
CTCTAAACGAAATTATTAGGCGGTGTTTGGCGTTGATTTGATTTGTCTCC
TTTGTTTTTCCGATGCAAGCTGGTACCAAAGTGAAAGGGTTCGAAAGGAT
CAGACAATAAAGTTGTGATTAACAGTGTTCTAGTTAGGTTGACTAAGCTT
GTAAATGAGTAATTTTACCCAATGTGTACAAGCAACATCGATTTTCAGTT
TTATTAAGGGTTCTTTGTTGCAAAACAACATTTTTTTCCACCTAAAAAAA
CACATTTCTAGACAATAAACTTTGTTTCTCTCCTCTCTTTCTGACGAAAA
TTCCAACTACTTTCCCACAGGAAGCACACAAATACCAGACAGCCTTAGAT
GGGAACAGGATGATGACCTTTCTAATTTACGTGAGTCAGGATATCTGATT
CTATATAACGTAACCGTGACCTTCAGGTACCGTTGGCTGAGGCTGAAGGA
AAGTTCCACGGAGAAAGTCTAAAAACGTCAAAGAAAGTTTAAGTTTGTAA
AACCTGTTGTTGTGAGTTGTGTGGTGGCCAACAAAATGTACATGTTTCCG
TATTGCATTGGTCAAAAGTGTTGTTCTTTAGCTTCGTTGTTTGTTTGTTT
TTCGTTCCAGCTGAACGAAGTTGAAGCAGGCGGTGCTGTTGTCTTCCCTG
ATCTCGATCTCATCACTCCCGCTGTGCAGGTACATGACTTGTCTTTGTCT
TCTTACTGTAGCTTATATTTTAGCATAAATATTTACATGTGTGTATTATT
GGTTCACACGTGTGTAACTTATGATGTAACCGAGGTAATGTAGTATTTGA
CTTCGACTTTAAAGGCACCCAGAGCATTTTATAAGGCTTGAAAACTGGAA
ATATTCTAGTTGCTGTAGTCTTTTTGAAATTGACATTTAATGCCACTGTT
TACCACATTTGCGTGCGGATTTCTTATCAAAAGTGCTCAAAAGCGGCACA
AAAATAAGTTACATGGTGATCTTTTAGTTTCACGCGCCTAGTGTAAATAG
ACTGATACCATAGCCCAGCCCACTTCCGTCAAAACGTAGAAATGCAAAAT
TAAAACATAAAAATGCAAATATTTGACGGACATGCAGTCACTCTCTCATT
GGTTGAACCGCTATTTAAATTGTGATGGACAGTCAGGATCAGTCTATTAG
GGCTTGGATTTTCTATCAGTTTTCACCACACATCGTGATGGTATCTTTGC
TCCTTTAATGTCGATATGTAATAGTGTTATTGAAACTTACTATGTGTTGG
AATGACTAGAAATTGGATTTTTTATTCAAGTTTGAAGCCTAATAAAATGC
TCTGGATGCCTTTAAAATGTCTGATGCACAATCAGTTGATTTCCACATCA
TGAGCATGCCTTACCTGTCCTTTGCTTTCTTTCCAAGTATGGCGACCATT
TCCGATGAAGGTATGGTGACCATTTCCGAGGAAGGTATGGTGAAAAAAGT
CATGGAAATGTTTGATTTTTATTCCCAGAATGCCGCCCTGATGATTGAAA
ATCTGAACAAATCCGGAGACAACTTGCCGCGGTCACAACACGCGGGGTGT
CCGGTTCTCATCGGCTCCAAGTGGAGTAAGTGTTCCGAAACTTTATCTTC
AGCTAGTTATCTATTTAGTCAGTGAGTTTTGATAAGTTCTACCAAAAGCT
ATGGTAAAGATCATTCTAGATCTGTAAAAGGTTACTTTATTGGATTGTTA
TTAACAGCTTATGTTATGTCAGTGTGCATCGGTCTTTATCATGTTTGTTC
TTTTTTCACAGCGGCTATCAAGTATATACGTGAGTTTGGGAACGAGTTCA
AGCGGCCTTGTGGTCTCACACCAGACGAGTGATGGTCTCGCCACGATGTT
ATGATCACTATATTTACATTCTATTACGTCGTCTACATGTGCCTTTTCTG
CACGATTTGTCTAATAGACTACATGGACAATTGTCTAACGTCTAGTAATG
TTTTGTTTTAAATGCAGTTATGAATTTTGAATTCGTATTTTCTGGCGTTC
TTCCGTCGATGGCGTCAACGTACAAATGACGAAATATCAGAGTGTAATGA
CTGACGAGTACATTTTCTTTGACTTGAAGCAGCTATTCTAATTTACCTGA
AAATTTAATTTTTTGGTTATTTGTTTACTTTTCGTAAAATGATTACCTGT
AAATGGTAATGTCGTTGCTAGAAACTTTGCCCAGAGAGGTCTCTTAACGT
TACTTGGACCGTACAGGCAGTGCACATTCAGACACGGTGACCCGGTAGGT
TAAGTGTGACAGGTGCAACAACCGGATGCACCCCCTCCGGCAAAACAAAG
TAAAAACAATGGCCAACAGATGTAACAGGGGTCGCAACGTTATATTATAC
TACTATATACCTAGCTCAATTGCAGTCCAGTTATACCAAAAAATAGATGA
TGATTTTGGAGGCTTCTCTAGCTGACATTTAGACGACGATTGATTATGAT
GTCTGCCAATAAATCTATTACCAAGAATTTTCTGAATTATGTTTGTTGAT
ATACTTTTCTACAGTAGTGTCCTT Coding sequence (CDS) from alignment at Sc0000037:1342029..1349602+ >Blg02843.1 ID=Blg02843.1|Name=Blg02843.1|organism=Branchiostoma lanceolatum|type=CDS|length=1362bp|location=Sequence derived from alignment at Sc0000037:1342029..1349602+ (Branchiostoma lanceolatum)
ATGTTTCTCCGCGTTCTCCTTTGCTTTGTAGTTGTAGTCAGCCTCTGTGC
TGCTAAGGACATAGGGTATTACTCCGCGATCGTGCGGGTGGAGAGGCTGC
TGCTGGCGGAGAGGAAAATGGTCGGGAAGGTCAAACAGTACATCAGCCAG
GGCGGGCAGGTGACTGGGGATCTCAGGAGCTACGTGGACAGCTATGACGA
CAGCTGGCTACATCCGCCTCGGGATGACCCCTTACATTTTGCCCACCATC
CGGTTGGGGCTTATCTTTTGATCAAGCGACTCAGTCAAAAGCATATGAAG
GGCGTCTTCCAGCAGGCTCAAGATCTGATTGAGAAACCAAACATACTGGT
TGAGCTCCCGGACAAGGAGGATCTGGAGATGTCCGCGTTCGCACTGGTCC
GGCTCCAGCTGGTCTACAACCTGGACATCAACAGCCTGGTCCAGGGACAG
GTGGTCATGACGGTGACGTCACCTCAGTCCGCGGTGCCGCAGCACATTGC
AGTGACCGGGATGGAGCCGACACTGACGCTGGACCTGTCTGACACCATGT
TCATCGGGGACGTGGCATGTCGGCAGAACGACTCTGAGAGCGGCATCTTG
TGGTATAACTTCAACTTGGCCTCCGCTGACGGGCTGAATAGCAGGGTTAA
AGCTCTGTCAAGGATAGCCAGTGCCCACTCTAAGATGAAGCAACACGAGA
AAGCCTTTGCTATATATCGGGAAGCATTGGATCTTGATCCTGACAACCAG
ATCCTTTACGCGGACTATGACGACGCTATGCGGCTGGCAGCTCTCGGCGG
CACCGCGGCGGATGAAGCACCAGCCAAGTTAAAGGCCTCACTGGCCAAGT
CCAGACACCTCTGTCGTCTGGACGTTCTTCAGAATGTAGCGCCTCGTCGA
GGTCTCAAGTGTCGTTACGTCCGAGACAGCCCACACCTTTACATCAGTCC
AGCCAAGATGGAGGTTCTTCACAGGAAGAACCCTCGCCTTGTCATGTACC
ATGACGTCATCAGTCAGAACGAGGCCAGGACATTCAGGAGTACGGGATTC
CCGAAGTTTCGACGGACTCTGGCTTTGGATGGTAAGGGTCGTGTCTACAT
CGACATCTACTCAGTCAGTGAAAGCGGTTCCATCCGTGATAAGGAGGACT
CGTTTATAGGGAAGATGAGCAGACGAGTCGGCCACCTGACCGGTTTGTCC
ACGGGACCGCCGCATGCAGAGCCTATGATGGTCTTTAATTTCGGGCTAGG
GGGCGCTATTCAACATCACAAGGACTACATGGCGGAAGCACACAAATACC
AGACAGCCTTAGATGGGAACAGGATGATGACCTTTCTAATTTACGTGAGT
CAGGATATCTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg02843.1-exon-Sc0000037-1570713199:1342029..1342474 | Blg02843.1-exon-Sc0000037-1570713199:1342029..1342474 | Branchiostoma lanceolatum | exon |
| Blg02843.1-exon-Sc0000037-1570713199:1343732..1343883 | Blg02843.1-exon-Sc0000037-1570713199:1343732..1343883 | Branchiostoma lanceolatum | exon |
| Blg02843.1-exon-Sc0000037-1570713199:1344268..1344620 | Blg02843.1-exon-Sc0000037-1570713199:1344268..1344620 | Branchiostoma lanceolatum | exon |
| Blg02843.1-exon-Sc0000037-1570713199:1344745..1344796 | Blg02843.1-exon-Sc0000037-1570713199:1344745..1344796 | Branchiostoma lanceolatum | exon |
| Blg02843.1-exon-Sc0000037-1570713199:1345337..1345482 | Blg02843.1-exon-Sc0000037-1570713199:1345337..1345482 | Branchiostoma lanceolatum | exon |
| Blg02843.1-exon-Sc0000037-1570713199:1345810..1345983 | Blg02843.1-exon-Sc0000037-1570713199:1345810..1345983 | Branchiostoma lanceolatum | exon |
| Blg02843.1-exon-Sc0000037-1570713199:1346176..1346243 | Blg02843.1-exon-Sc0000037-1570713199:1346176..1346243 | Branchiostoma lanceolatum | exon |
| Blg02843.1-exon-Sc0000037-1570713199:1346442..1346547 | Blg02843.1-exon-Sc0000037-1570713199:1346442..1346547 | Branchiostoma lanceolatum | exon |
| Blg02843.1-exon-Sc0000037-1570713199:1346851..1346904 | Blg02843.1-exon-Sc0000037-1570713199:1346851..1346904 | Branchiostoma lanceolatum | exon |
| Blg02843.1-exon-Sc0000037-1570713199:1347399..1347757 | Blg02843.1-exon-Sc0000037-1570713199:1347399..1347757 | Branchiostoma lanceolatum | exon |
| Blg02843.1-exon-Sc0000037-1570713199:1348557..1348653 | Blg02843.1-exon-Sc0000037-1570713199:1348557..1348653 | Branchiostoma lanceolatum | exon |
| Blg02843.1-exon-Sc0000037-1570713199:1348840..1349602 | Blg02843.1-exon-Sc0000037-1570713199:1348840..1349602 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000037 | genome | Sc0000037:1342029..1349602 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg02843 |
|
