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Sequence
The following sequences are available for this feature:
mRNA from alignment at xfSc0000054:1..4848- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >Blg02344.5 ID=Blg02344.5|Name=Blg02344.5|organism=Branchiostoma lanceolatum|type=mRNA|length=4848bp|location=Sequence derived from alignment at xfSc0000054:1..4848- (Branchiostoma lanceolatum)
ATGATGTCAGTTCGCCAAAAAGTCAGATCTTACAAGAGAAGGTGGGTATA
ATGATTTGTATCTGTTATGTTTTTAGAAAAACATGTTATTCTGACCTGTA
AAAGAGGCAGTGATGTAGTTGTTTACTCAATTGTTTGTTCCTTTTTTTTC
TCAGGTTGATAGCAGAGGGGAAGTCAAAGGAGGAGCCCAAGTCTGTGACT
CTGAAAGTAGAGAACAGGGACATCGAGTGCCCAGCTTATGTAAGTAGATT
AGTTGCCTCTACATATTACCATACTCAAGTTGGCTTTGAAGCAACATTAT
CAGCTGTCTCGACTACAAAATTGGTTGTATATATAACAAAGTGTTTGATG
AAAAATTGAAATTTGGCATTAGAAGTAGAAGCTATGAATGTTCATGTTGA
TTTAACATTCTGTTCTTTTTCCCATTTTTCCAGTCTAAGTCCTTTTCCGT
CAGCAACACAGACTCGGCCAGCAATGTGGTGAAGATGTCACTACAGCAGT
TCGGAATCACTGTAAGTTGTCACCGTCACTCAAAATATAATGGTTTACTT
CACTAGGTAGACACATGAATGCTATAACTTCATTATAATCTACAATGATG
TAGATGCAGTAAAAAGGAGGTACAAATGTAATTGTAGAGACATAAGCTAA
TTTGATATTCTGAATGTATTCCAGGACGATGCCAGTAACTACAGACTATG
GGTGAAGTCAGGAAAAGACGAGGCTCCGTACCCGCTCATCGGGCACGAGA
TCCCCTTCGCCATCAAGATGTCTCACCTGCGTGACGCGGCTGTGACGGCT
GGGGACGATCACCTGGTGCTGCTGGATCAGGAGATCATGCCCAGTATGGA
CCACCTGTCCCCCGAGACACAGGTCCAGTTTGTACTGAGGGACAGCAGGA
AGACCAAAATTGTCATGGGTAAGCTACAATCATGTTTGTTTTAAGGGATC
TGATTTTTGTCCGAATTCTAAGGGTAACGGTGACGATGTTCTGTTAAGCT
CAGACTAACTTTTCCTTGTTCTTTTTCTTGAGCAGAAGACATTCCAAGTA
AGAAGCTGAAGAGGTTCAAGAAGTCTCCCATCATCAACTGGCCCTTCAAG
CGCACCTCCAGCAAGTCTGACATGCCTGACTCACCCTCAACATCAGAGGC
TAGGGGAAAGTATGTACTGCCAATGCTTTTCTCTACTGTAGATAAACAAA
AGATTGTGTTTCCTAGAAGTAGCAGTCTTCCTACAAGTATACTGTATTGT
GTTTCTTCAGCATCTCTTGTACTCCACATAAGTTTTGTGGATAAGCTACA
TTAGTAAACCTGAACCAGAACTAACCTAAGTGCTGTTCTGTTCTCCCCAG
GTTGTTTGGCCACCCTCTGGAGAAGGTCTGTGTGGACGGCCAGCTGCCCA
GACCCATCCTGGACCTGCTGACCTGCCTGTTCCAGAACGGGCCGTACGTC
ACCGGCATCTTCCGCAAGTCCGCCAACGCTCGCTGCTGCCGCGAGCTCAA
GGAGAAACTGGACAAGGAGGCTGAGTACAGCCTGAGCGAGTGCCCCATCC
ATGCTGTAGCAGCTGTGTTTAAGGTATGTTACAGCTGTTTCAAAGTCTTT
AACCTTCTCCCTGCGGCTACTTCAGAGTGCTAAAGGTTAAGGACTGTCTT
TTCAGCACAATAAACACTGCATGATGTCCCATCCTAAGGACAGCTACCCT
TTCCAGTAGTATGCATGTCGGAATTCAAAATCACGGCTGCTTAGTCCAGA
CATGAAGTTTGACGTTGTTCTGTTCGACAGTGACTGATATGTTTTCTCTC
CCTGTGTTTTCAGGACTTCCTCCGTAACCTGCCCCACAGCATCCTGCACA
GCGATCTGTACCAGGACTGGGTCGCCTGCAATACAGAACAGAACCTCTCA
GCCAAGGTCACCATTGTCAGAAGGTGAGGACTTCTGTTCCTGTTTTCTTT
AAGAAATTGTTAGAGAAGCTTTTTGTTTATCATTCTTCTTCTTTCAATTG
AGGCAGCTGCCTTCAGCGTTTCTGAAGATTATGCTAACAGATACAGTACT
TGAATCAGATTGGAGTCTTGAAACTGTCCAAGGTGGAACGGTAGTCTAAG
CATAAAGATGTTAGAACTGATGATGTTAAATGAGTTAGAAGAGCAACACA
ATAACCCCTGTCTGACGTTGGTTTCCAGAATACTTGACCAGCTTCCCAGC
GGTAACCTGACCCTGCTGCGGTACTTTGTGTGCATCCTGCACCACATCAG
CCTGAAGAGCGATGAGAACAACATGACCGCCTACAACCTGGCCATCTGCA
TCGCCCCCAGCATGCTCAACCCCCCACTGGAGGCCTGCGGGGACATCCAG
GCTGCTGCAACCAAACAGGTGGGTGGACTGGTACTGCAGGGGTTGAACCT
GGTCTGTTGGGATGTTACATTATCAGAGCTGATGCCGAATGGTTTTGTCA
TAGTGTTGGTGTAATGTTTTGTGGAATGAAGACAAATCAGAACAGGTGTA
AAGATCAAAGGCTATCACTCTCTTTGCTTTTTGGCTAGGACCCTGAAATT
TTCAAAAAGAAGTTTTGTTTGGGGCTTTCTTTTCTATTTTTGTATCTTTA
TTTCTGTTACTGGTAGAACCTAGTTTTTTTATCTCTTTGATGATACATGT
ACCTACTTAGTTTTGAAGGAGACTAACGACAGGTTGCCATTCTGCCTTGT
GTAGGTTCCAGAAGTGGTGCAGCTGCTGATCGAGCACTGTAAGGAGATTT
TCGGTGCAGACATCACGACCATCATGGGGGATGCGCCGCAGGATCCTGAC
CACAAGCTGCGGCAGGACTCCAGCGGTGACTCAGACTCTGTCAACAGCAT
GCAGGATTGTACAGGTAAGGAACAGTTCATTCACAGACCCTCGGTGACCT
TAACTTTTGATGTATAGGCTGAAAATTATGACTAGTTTTTCAAAGCTGTT
TTCAAAGATTGTTTTGATGGAATGCAGCAAACAATTCCAATAAATCGCAA
ATGTTTGGAACAGGAATAGCATGTGAGGAATGCAAGGTATTTGTAATTAT
AAGATAAGCCTTGAGGCCCTGTCAGGCTAAAAATAAACTATTGATGAGGT
ATTTTTGTAGAAACAAACCTTGTCCTCAGTGGGGGGAGTTATTAGATTAG
TCTTTGGCATTTGCTGGCTCACTGACAGTATAATTTGGCATCCCAAACAT
TTTTAGTGAAATAGTTATACAGATCATGATAGAAACAGCTTTTCCATGAT
ATGGAGTGAAGTATGACTTTAATATCTGAAAACAACTAGTAGTTAAGAAT
ATTTGACACATGAGTCCTGACCAGAAGTTTTTGTTTGTGTACAGGAGTGA
TGAGACGGGACGACTCCTCCCTGGACAGCCTGGAGCGCGAGCTGTACATC
TCCGAGATGGAGTCCAGCCCGCGGACGCAGCACGGCGACCAGTTCTCCCC
CTCCAGCCTGAGCAGGGACTCTGGGCTGACGCTCAGCGACACCAACCTGT
ACCACCCTGAGGAGGAGCATGCTGGGAGCTCCGACAAGTCTCGCTACGAT
GCGAAGTACCAGCACGAGCGGTGCAACAGCGACAGCTCGCAGCACCAGAT
GAGCTCTGTCCTGGATAACATGTCTCTGGGCTCCAGTTCCGGCTACTCCT
CTCTCTCGCACGACTCCACACCGATCCCCCCTCCCCGGAGGAACCGGAGA
AAGTCAGAGCCGCCACCTCCACCAGCGAAGCTACTGAGAATGAGGAAGAA
CTCGGACGAGAGAATAATCCCCGAGTACATCAAGCAGATCAAACAGCTGC
AGATTGAGAGCCAGAAAATGATCAGTGAGACGGAGGTCTACTCCCCGGAA
AAGGACACTGTTCCTCACAGGAGGGTGACTGTCACTGGCGCTGTGGACAG
ACCGAACACACTGGACTTGTTTAGAGACGTCAGAAAGAACAGTAACTCCT
CTGACCTCTCGCCCTCGTCGGACAGCGTGTTTTCTGGATCGGAGAACAAC
TCGCGCCGATCCAGCGATGCCTCCCTACAGAGAGCCCTGGGAAATCTTGT
CACCGTGTCGCCCAGAGTGTCAGATTCCCATGGTCCTCCCGCCCCGCCAC
CGAGGAAGGAGGTGTCTGCTGAAGCCGTGAGGCTGAATATTGCCCTTGGG
CTACACAACAAGAGGCCGTCAACAGACTATGGTGTACATGTTGCATACTC
ACGGCCTCACACGGCAACTCCTCCGGCCCCAAAGGCAGAGGAGGGGCCGT
ACTTCGCCTCTTCACCCTCAAAGATGTCATCACGACAAGCTGAGACACCA
CCCAAGTCATCTCCCACGTTGGCAGCAAGGCCCACTCCAGCCAGCAGCCT
CACCAACCTGAGGAAGGGTCCCCATGCCCTGCTCAGAAGTAAGAGTTCTG
GGACTCTGATCACAACCGGCTTAGAGATGTCCCTGGAATCGCTCACGTCC
AGTGATAGCAACCTGCAGGTGTTCCACGCCCGCAGCAGTTCCGAGAGCGA
CACACTGGACGAGAGGCCATCTGCCCTTCGGCAGAGAACCTTCACCAGCC
CCAATCCTTTGGATTTAAAAGAGCCAAAGGTTACAGCAGAACAGGTCTTT
GAAGTTGTTGACAGGAAGAAACCGAACCTCCCTCCCTCCTACCAGGAGGC
AGTGAGTCGCAGCCGTCAGTACCCCATCTCCAGCGGCATGCAGGGTCTCA
CAGTACAGACTGTGAAAACCATGCGCATGCAGAGGCAAGATAAAACCATT
GAGACGCCAAACGAGCCTGTGTGGAAGAAGCAAAGTGAAACGGTGTGGGA
AAAGCAGTCCAGCGAATCAGGGCGAAACAAACGACCTAGTGAACCAGT Coding sequence (CDS) from alignment at xfSc0000054:1..4848- >Blg02344.5 ID=Blg02344.5|Name=Blg02344.5|organism=Branchiostoma lanceolatum|type=CDS|length=2759bp|location=Sequence derived from alignment at xfSc0000054:1..4848- (Branchiostoma lanceolatum)
ATGATGTCAGTTCGCCAAAAAGTCAGATCTTACAAGAGAAGGTTGATAGC
AGAGGGGAAGTCAAAGGAGGAGCCCAAGTCTGTGACTCTGAAAGTAGAGA
ACAGGGACATCGAGTGCCCAGCTTATTCTAAGTCCTTTTCCGTCAGCAAC
ACAGACTCGGCCAGCAATGTGGTGAAGATGTCACTACAGCAGTTCGGAAT
CACTGACGATGCCAGTAACTACAGACTATGGGTGAAGTCAGGAAAAGACG
AGGCTCCGTACCCGCTCATCGGGCACGAGATCCCCTTCGCCATCAAGATG
TCTCACCTGCGTGACGCGGCTGTGACGGCTGGGGACGATCACCTGGTGCT
GCTGGATCAGGAGATCATGCCCAGTATGGACCACCTGTCCCCCGAGACAC
AGGTCCAGTTTGTACTGAGGGACAGCAGGAAGACCAAAATTGTCATGGAA
GACATTCCAAGTAAGAAGCTGAAGAGGTTCAAGAAGTCTCCCATCATCAA
CTGGCCCTTCAAGCGCACCTCCAGCAAGTCTGACATGCCTGACTCACCCT
CAACATCAGAGGCTAGGGGAAAGTTGTTTGGCCACCCTCTGGAGAAGGTC
TGTGTGGACGGCCAGCTGCCCAGACCCATCCTGGACCTGCTGACCTGCCT
GTTCCAGAACGGGCCGTACGTCACCGGCATCTTCCGCAAGTCCGCCAACG
CTCGCTGCTGCCGCGAGCTCAAGGAGAAACTGGACAAGGAGGCTGAGTAC
AGCCTGAGCGAGTGCCCCATCCATGCTGTAGCAGCTGTGTTTAAGGACTT
CCTCCGTAACCTGCCCCACAGCATCCTGCACAGCGATCTGTACCAGGACT
GGGTCGCCTGCAATACAGAACAGAACCTCTCAGCCAAGGTCACCATTGTC
AGAAGAATACTTGACCAGCTTCCCAGCGGTAACCTGACCCTGCTGCGGTA
CTTTGTGTGCATCCTGCACCACATCAGCCTGAAGAGCGATGAGAACAACA
TGACCGCCTACAACCTGGCCATCTGCATCGCCCCCAGCATGCTCAACCCC
CCACTGGAGGCCTGCGGGGACATCCAGGCTGCTGCAACCAAACAGGTTCC
AGAAGTGGTGCAGCTGCTGATCGAGCACTGTAAGGAGATTTTCGGTGCAG
ACATCACGACCATCATGGGGGATGCGCCGCAGGATCCTGACCACAAGCTG
CGGCAGGACTCCAGCGGTGACTCAGACTCTGTCAACAGCATGCAGGATTG
TACAGGAGTGATGAGACGGGACGACTCCTCCCTGGACAGCCTGGAGCGCG
AGCTGTACATCTCCGAGATGGAGTCCAGCCCGCGGACGCAGCACGGCGAC
CAGTTCTCCCCCTCCAGCCTGAGCAGGGACTCTGGGCTGACGCTCAGCGA
CACCAACCTGTACCACCCTGAGGAGGAGCATGCTGGGAGCTCCGACAAGT
CTCGCTACGATGCGAAGTACCAGCACGAGCGGTGCAACAGCGACAGCTCG
CAGCACCAGATGAGCTCTGTCCTGGATAACATGTCTCTGGGCTCCAGTTC
CGGCTACTCCTCTCTCTCGCACGACTCCACACCGATCCCCCCTCCCCGGA
GGAACCGGAGAAAGTCAGAGCCGCCACCTCCACCAGCGAAGCTACTGAGA
ATGAGGAAGAACTCGGACGAGAGAATAATCCCCGAGTACATCAAGCAGAT
CAAACAGCTGCAGATTGAGAGCCAGAAAATGATCAGTGAGACGGAGGTCT
ACTCCCCGGAAAAGGACACTGTTCCTCACAGGAGGGTGACTGTCACTGGC
GCTGTGGACAGACCGAACACACTGGACTTGTTTAGAGACGTCAGAAAGAA
CAGTAACTCCTCTGACCTCTCGCCCTCGTCGGACAGCGTGTTTTCTGGAT
CGGAGAACAACTCGCGCCGATCCAGCGATGCCTCCCTACAGAGAGCCCTG
GGAAATCTTGTCACCGTGTCGCCCAGAGTGTCAGATTCCCATGGTCCTCC
CGCCCCGCCACCGAGGAAGGAGGTGTCTGCTGAAGCCGTGAGGCTGAATA
TTGCCCTTGGGCTACACAACAAGAGGCCGTCAACAGACTATGGTGTACAT
GTTGCATACTCACGGCCTCACACGGCAACTCCTCCGGCCCCAAAGGCAGA
GGAGGGGCCGTACTTCGCCTCTTCACCCTCAAAGATGTCATCACGACAAG
CTGAGACACCACCCAAGTCATCTCCCACGTTGGCAGCAAGGCCCACTCCA
GCCAGCAGCCTCACCAACCTGAGGAAGGGTCCCCATGCCCTGCTCAGAAG
TAAGAGTTCTGGGACTCTGATCACAACCGGCTTAGAGATGTCCCTGGAAT
CGCTCACGTCCAGTGATAGCAACCTGCAGGTGTTCCACGCCCGCAGCAGT
TCCGAGAGCGACACACTGGACGAGAGGCCATCTGCCCTTCGGCAGAGAAC
CTTCACCAGCCCCAATCCTTTGGATTTAAAAGAGCCAAAGGTTACAGCAG
AACAGGTCTTTGAAGTTGTTGACAGGAAGAAACCGAACCTCCCTCCCTCC
TACCAGGAGGCAGTGAGTCGCAGCCGTCAGTACCCCATCTCCAGCGGCAT
GCAGGGTCTCACAGTACAGACTGTGAAAACCATGCGCATGCAGAGGCAAG
ATAAAACCATTGAGACGCCAAACGAGCCTGTGTGGAAGAAGCAAAGTGAA
ACGGTGTGGGAAAAGCAGTCCAGCGAATCAGGGCGAAACAAACGACCTAG
TGAACCAGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg02344.5-exon-xfSc0000054-1570713199:4808..4848 | Blg02344.5-exon-xfSc0000054-1570713199:4808..4848 | Branchiostoma lanceolatum | exon |
| Blg02344.5-exon-xfSc0000054-1570713199:4610..4694 | Blg02344.5-exon-xfSc0000054-1570713199:4610..4694 | Branchiostoma lanceolatum | exon |
| Blg02344.5-exon-xfSc0000054-1570713199:4338..4415 | Blg02344.5-exon-xfSc0000054-1570713199:4338..4415 | Branchiostoma lanceolatum | exon |
| Blg02344.5-exon-xfSc0000054-1570713199:3931..4174 | Blg02344.5-exon-xfSc0000054-1570713199:3931..4174 | Branchiostoma lanceolatum | exon |
| Blg02344.5-exon-xfSc0000054-1570713199:3690..3813 | Blg02344.5-exon-xfSc0000054-1570713199:3690..3813 | Branchiostoma lanceolatum | exon |
| Blg02344.5-exon-xfSc0000054-1570713199:3276..3498 | Blg02344.5-exon-xfSc0000054-1570713199:3276..3498 | Branchiostoma lanceolatum | exon |
| Blg02344.5-exon-xfSc0000054-1570713199:2926..3035 | Blg02344.5-exon-xfSc0000054-1570713199:2926..3035 | Branchiostoma lanceolatum | exon |
| Blg02344.5-exon-xfSc0000054-1570713199:2481..2670 | Blg02344.5-exon-xfSc0000054-1570713199:2481..2670 | Branchiostoma lanceolatum | exon |
| Blg02344.5-exon-xfSc0000054-1570713199:1985..2144 | Blg02344.5-exon-xfSc0000054-1570713199:1985..2144 | Branchiostoma lanceolatum | exon |
| Blg02344.5-exon-xfSc0000054-1570713199:1..1504 | Blg02344.5-exon-xfSc0000054-1570713199:1..1504 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0000054 | genome | xfSc0000054:1..4848 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg02344 |
|
