Blg02126.0 (mRNA) - B. lanceolatum

Overview
NameBlg02126.0
Unique NameBlg02126.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000450:164888..167893+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg02126.0 ID=Blg02126.0|Name=Blg02126.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3006bp|location=Sequence derived from alignment at Sc0000450:164888..167893+ (Branchiostoma lanceolatum)
ATCGGACCCTACGACGATAGCTACTATATTGTCTTAACCCAAACGAATCC TAATATTAGCTCTTACAGAGTGAGCAAACTGTATCTTAGTGTCGCAGGGT ACTATGGACGCTGTTGCTACTCAACAGACACGCCCGTTATAGTCTGGATG TCACCCGAAGACAAAACCAATGTTTGCACAAGCCCACGCCTTATTTCCAC ACGTCAGCCTTCTCTATATAAGTCCCAGTCAACCGTACACTACCAGCCAC AATTAGCAGAGACATTGTAGAAGGCACACGCCGTGAGGAAGGATTATAGC ACAGTTTGGATTTAAAGTTTTGTATAATCTCGTCCTCGGATTCTATTCCA AAATGGCGGATGGATGCTGTGCGAACTGCAGCAAGGTTATGCTGTTCATT TTCAACAGCATCTTCTTCGTAAGTACCTTTGTTGATATTGCATTGCCGCT ACTTTTCTTTACTTCGTGGTGGAAAAATTAAATGAAGAAGAGACTGCTTT TTATTGTCTCTTTGCTCTAGAAAAAGACGTTGAAGGTGAAGAAAATGGGA ACTGCTTTTTAATCTGGTGTTTATCATGTCAATATGTTTTGCTGCCCCGG TCCCGTTAATTCCTTATCTCAGGCATTGGTGATAGTTCCACAGATCACAA GTAAAACAATAAAACACTCATATCTATTTCCTTCTCAGTTTAAGATATAT ATATATATGTATATACTTATATACATCATAAGGCGTGTGATGGCACCGCA CAGTAAGATAAAGACTTCTCGTGGACTTTCAACACTGGTCTTTCTCAGTG GCGTGGTGGCCAGAGCCAAACTGCTTAGTCATTCAATCGATCCATGAAGA AATTTCGAATTTAATAAAGCGCTGATCACCGATTTGAAATCAAAACCACA AGCATCATACCAGTGACATCGAATGTCTAAATTATTCTATTGCCTTAAGT GTGGTATTTTCAATTTTTGACAAGTACAATTCAACAGATTTGTGGCGTTG TGTTGGCGATATCTTACGAAAGGTTTTTGAGTTACCTTTATGAAATCTTT TAGGTTGCCGAAATATTTCGCAGTATCTCCATACGTATTTCGGAAAATCA AACTCTGCTTAATTATCGTTTTTCGTGCAGTGATTGTTAGGGTGTTGGCC CAGAACCCGGAGGTCCTGGTTTCGAATCCCCTGACATGCCACAGACGTTT TTCCATCGGAAAAGGCACTTTGCACGACTTTCCTATATTTTTATCTCCGC CCAGGTGTAAAATGGGTACCTGACTTCTGTTGGACAGGTAGAAGGAGAGG GTTAGGCTCCGCCTTCCAATATCGTACTAGGCACAGTGGATAACAACCCA CAACCCCACGGCCTCAAAAAGCCCACGAGACTACCTTTACCTTTTTTACC TCCCCCCCAGCTGGCAGGCCTGGGCCTGTTGGGTGCAGGTGTGTGGGGGC TGGTGGACCCTTCCCTGCGGAACCTGCTCCTCCTGGACCTCAGCTTCTTC AACTCCGTGGCCATCATGTGCATTGTAGCCGGCAGCCTCGTCATTATCGT CTCCTTCCTTGGCTGCTGCGGCGCCATCATGGAAAATAAGTGTATGCTGA TCACGGTAAGGCCTAAGGATGAAATACACCAAAAATAATAACTCAAGCAT CTAGATAAATTTTTGAAACAGACGTTTCAGACAGCATCCGCTATCTTTCG TCAGGGACTAAGGAAAGATCTGGCAGAACCACATTTTGCCTAAGCCTAAG GAACACGAATTAGTGCCAAAGCTCGAACCAAAAGATATTCAATATTTTAA CAGAAACAATATATTAATGGCACAGGCGACATTAGTGTGAGGTATCCATA GCGATAGTCACAACATTCCCCATTATGTAAGGTGAACATTTCAACAATTG AGTCGGAAGTCGTGCACAGCATCTTCCTGGCACTACTCTGCCGCCACACA TATATTTGCTTTTAATGAAGTGAATGTTGTGCTCCTTTTTCCAGTTTGCT GTGTGCCAGTTCCTCATCTTTGGACTGATGCTCTCCGCCGGAATTGTGGG GCTTGTTTACAAGGATAGGGTAAGTCCATGTGATCTTGAACCAAAATAAA GGTAACAGCTTTTTCAGCATAGCTACTTTTAAGGACTTTGATATCTCTTA GTCTAAAGCCGTATTTGTCCATCTATCTATTNTGGTTTCGTTTATTAGAT CTCCATTCAGTGTAACACCACTATTCTTCCTGGAGTCCATTTAAAATTAT ACAAATTACAGCAACGGAAATATACAGCAAATTTTATACAATAAACAGAA AACTAACATAAGTCGAACTCAAAGCCAGATAAATAACAAGTCAAGGTCAA ATACGATGAATCAAATGTACAGCAAACTATACAAACAAAACGTACATTTG AAATTAACAGCAAACTTGATAAAGGAAACTCAAATTCGGATAGCGCTAAT TGCTGACCTTTTCCCGCCCCAACAGTTCAAGTGTTGCGGCTACAGCAGCT ACAACAACTGGAGAAGCCCAGGCGCTGTGACGTCATGTGACTGTAGCGGG GAGACGACGGCGGACGCAGCAACGTACTGTGATGCTACTACGCCTGCGTA CTACAGGGTGGGTTGGGCATGCGCATTTGTCCCCTACTGGACACCATTGA ATGGTCGATTTACTGTCTGCTTCCTTTTCCCGATTTTGAAAAATCAAAAA ATGGGTTTCGTAGCATTGCATTTTGTTGCAAATGCAACTTTAGCTAGTCT TCATACGAAACTGATTTATCCTGTATGTTCGAATAGTATCTAACGTTCAC CACTAATTTTGCTCTCTTGCGAAATTGGTACGAACTGCAGTTGAAAAAAT TGTGCTTGTTTTCTCCAGTCCTGTCAGACCCTGTTTACCGACTACATGTA CTGGGGCGTGCAGACGGCTGCCATCATAGTCATGTCTCTCTCCAGCATCC CAGTAAGTCATGTCATTCAGTACATTGTAACTCCGGGAAGGAGGGTAACC TCCTGA

Coding sequence (CDS) from alignment at Sc0000450:164888..167893+

>Blg02126.0 ID=Blg02126.0|Name=Blg02126.0|organism=Branchiostoma lanceolatum|type=CDS|length=606bp|location=Sequence derived from alignment at Sc0000450:164888..167893+ (Branchiostoma lanceolatum)
ATGGCGGATGGATGCTGTGCGAACTGCAGCAAGGTTATGCTGTTCATTTT
CAACAGCATCTTCTTCCTGGCAGGCCTGGGCCTGTTGGGTGCAGGTGTGT
GGGGGCTGGTGGACCCTTCCCTGCGGAACCTGCTCCTCCTGGACCTCAGC
TTCTTCAACTCCGTGGCCATCATGTGCATTGTAGCCGGCAGCCTCGTCAT
TATCGTCTCCTTCCTTGGCTGCTGCGGCGCCATCATGGAAAATAAGTGTA
TGCTGATCACGTTTGCTGTGTGCCAGTTCCTCATCTTTGGACTGATGCTC
TCCGCCGGAATTGTGGGGCTTGTTTACAAGGATAGGTTCAAGTGTTGCGG
CTACAGCAGCTACAACAACTGGAGAAGCCCAGGCGCTGTGACGTCATGTG
ACTGTAGCGGGGAGACGACGGCGGACGCAGCAACGTACTGTGATGCTACT
ACGCCTGCGTACTACAGGTCCTGTCAGACCCTGTTTACCGACTACATGTA
CTGGGGCGTGCAGACGGCTGCCATCATAGTCATGTCTCTCTCCAGCATCC
CAGTAAGTCATGTCATTCAGTACATTGTAACTCCGGGAAGGAGGGTAACC
TCCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg02126.0Blg02126.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg02126.0-exon-Sc0000450-1570713199:164888..165305Blg02126.0-exon-Sc0000450-1570713199:164888..165305Branchiostoma lanceolatumexon
Blg02126.0-exon-Sc0000450-1570713199:166298..166492Blg02126.0-exon-Sc0000450-1570713199:166298..166492Branchiostoma lanceolatumexon
Blg02126.0-exon-Sc0000450-1570713199:166882..166956Blg02126.0-exon-Sc0000450-1570713199:166882..166956Branchiostoma lanceolatumexon
Blg02126.0-exon-Sc0000450-1570713199:167363..167494Blg02126.0-exon-Sc0000450-1570713199:167363..167494Branchiostoma lanceolatumexon
Blg02126.0-exon-Sc0000450-1570713199:167756..167893Blg02126.0-exon-Sc0000450-1570713199:167756..167893Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000450genomeSc0000450:164888..167893 +
Properties
Property NameValue
GeneIDBlg02126