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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000294:296542..304785- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg02107.6 ID=Blg02107.6|Name=Blg02107.6|organism=Branchiostoma lanceolatum|type=mRNA|length=8244bp|location=Sequence derived from alignment at Sc0000294:296542..304785- (Branchiostoma lanceolatum)
GTCTGACCACATGCATACACGTTGCGTCTGTTTGAGATAAGCAAACACCT
TGCGTCTATTTGGGATAAGCAAACACCTTGCGTCTGTTTGGGATAAGCAA
ACACATTTACGTTTGTTTGCCGGATAATCAGGTGAGGTCATACAGCGGAC
AAAGGTCACAGTGCACGAGGGTCAACGTGCAACTGAACTGGCCGTCTGTG
TATGAATATGACCGATGTAACATGCCGGTTAACATCCCAACTATACTTCG
ATCAGGTGTCAGGCTGCCTATTTTAGGACTTGGAACATGGAAGGTGACTA
ATATCTATTGATTTTACATGTTAAACATGGTTCAGGGGACATATGTTGAT
CGTACTTCTCGGACTTTTGACACCTGCCTGCCCGTCCCAAATGCTTCCGG
CAAGGAGGTTAAGATGATTTTAACGTCCTTGCTTCAGGCACGAATTCATG
CCACGCTTACGGCATAACAGCGTTATGCGACGGAAAGGTTTCATTATCGC
TAGTAACTATATACCTCTGTTATTTGATATACGACTTCCACAGTTCGACA
ATGTTCGGCTCTGGAAAATAAATCTTGGTCTGCAGTTAAACNCACACACA
CACACACACACACACACACACACACACACACACACACACACACACACACA
CACACACACACACACACGCACACAATCCACTAAGTACTTTTAAATAAGCT
TGCAGTCAACTTTGAATATTATGATTTTTGTTGCCGCGTCATTTCAACAA
ATGGATTTCACTACTGAAGATAGCTGTAGGATCATGAAACTGCAACCTGT
GTGTTTTAGTGGTAGATTGTAAATGTTCATCGTCACCAAGGTAAATGGTT
TGGTCTGGTATAATCATTCCTGTCTGATGACTTAAATCTTGTACGTTTTC
TACCTTTATATTCCGCGTAACTGTCATGTGTAATCAACCATTGGCATATC
AAAACCGCGAAAAACGTCGTCATTTATGTTTCTTAGCATGATATCATCCA
ATCTTTCTTAGTAGCTAATCAAATATGTCCTTTATGACTGTGAATAGTCC
AAACCGAACGAAGTCGCCACAGCCGTGAAGGTGGCCATCGGTGCAGGGTA
CCGACACATCGACACCGCGTGGAACTATGGGAACGAGGCGGAGGTGGGGC
AGGGGGTGAGGGCTGCCATCAGGGACGGGACGGTGGAGCGGAGAGAGCTG
TTCATCGTCACCAAGGTAAGACGTAAAATCCCCTCTCTCCCTGGACCCGC
GGCACGTTGGCGGCGTCACAGCGTCCTAGACTGGATTTTATATTGGGAAT
ATCATGCCGTTGATACGTACCAGTATGACTGAAAAGACAACAAAACACAT
GCACGAAGCTTGAAAAGATTCGTTTTTCATCGATGAAATCGGCTGGTCGC
AGCGAGTCGCCAGCGTGCCGCGGTTCCAGTGAGATAGGGGTTTTAGTCGG
TAGCTCAGAAATACACTGATATATGTTCGGTAGCTACAAATAGTCCACTT
TGGGCTCAGTGATAGATTTGTTCAACATATTTTGCTGACGATAAGATCCA
TGCATGCCACTGGTTATTTCACTAATCATGTGACGCGAACAGATATCATC
TCCTCTTTAAAATCAGTGCACCTTTTACCTCATGTCTGTACAGCTGTGGT
GCACGTTCCATCGGCCTGAGGACGTGAAACTGGGCATAGCGGACAGTCTG
GACAAACTGGGTCTAGACTACGTGGATATGTACCTCATGCACGGTCCGCA
AGGCTTTAAGGTTAGCATAGCATACTTTGGACAGGGTGAACTGGCGTGTA
TCAAACTTTGAATGGCCAAACATGCAAGTGGTATACGTCCTAGCAATGTC
ATAGTTGCAGGTAAACGTAAATTCGTAATCAGTTAGATCTTTTATTGCTT
TTTAAAGGTGAGATACAGCAATAACCAAAATTCCCTTCCATTTTGCTTAT
AAAGGTAATTTCAAATCAAGGTTTGAAACATCTAGTGCACAATCTAGGCC
GAAATCTAGGCCGAAATCTATGACGCAAAGTCACATGTAGGCCGCAATCT
AGGCCGCAAAGTAAAATGTAGGCCGCAATCAAGGCCGCAAAGTAAATTGT
AGGCCGCAATCTAGGCCGCAATCTAGGCCGCAATCTAGGCCGCAATCTAG
GCCGCAATCTAGGCCGCAAAGAAAAATCCAGGCCGCAATCTAGGCCGCAA
AGTAAAATCTAGGCCGCAAAGTAAAATCTAGGCCGCAATCTATGCCGCAA
AGTAACATGTAGGCTGCAATCTAGGCCGCAATCTAAGCCACAATCTAGGC
CGCAAACTAAGCCGCACAGTAGGCCGCAATCTAGGCCGTACAGTAGGTCG
CAATCTAGGCCGCAATCTAGGCCGCAATCTAGGGCGCAATCTAGGCCGAC
AAGTAAAATGTAGGCCGCAATCTAGGCCGCAATCTATGCCGCACAGTAAA
ATGTAGGCCGCAATGTAAAATCTAGGCCGCAGTCTAGGCCGCAAAGTAAA
ATGTAGGCCGCAATCTAGGCCGCAATTAGAGCCGCACAGTAGGCCGCAAT
CTAGGCCGCAAAGTAAAATGTAGGCCGCAATCAAGGCCGCAAAGTAAATT
GTAGGCGGCAATCAAAGTCACATGTAGGCCGCAATCTAGGCCGCAAAGTA
AAATGTAGGCCGCAATCTAGGCCGCAAAGTAAAATGTAGGCCGCAATCTA
GGCCGCAAAGTAAAATGCAGGCCGCAATCTAGGCCGCAATCTAGGCCGCA
CAGTAAAATCTAGGCCGCAATGTAAAATCTAGGCCGCGATCTAGGCCGCA
AAGTAACATGTAGGCTGCAATCTAGGCCACAATCTAGGGCGCCATATATA
GGCCGCAATCTAAGCCGCACAGTAGGTCGCAATCTAGGCTGCAATCTAGG
CCGCAATCTAGGCCGCAATGTAAAATCTAGGCCGCAATGTAAAATCTAGG
CCGCAATGTAAAATCTAGGCCGCGATCTAGGCCGCAAAGTAAACTGTAGG
CCGCAATCTAGGCCGCAATCTAAGCCGCACAGTAGGCCGCAATCTAGGCC
GCAATCTAAGNGTAGGCCGCAATCTAGGCCGCAAAGTAAAATGTAGGCCG
CAATCTAGGCCGCAATCTAAGCCGCACAGTAGGCCGCAATCTAGGCCGCA
ATGTAAAATCTAGGCCGCATCTAGGCCGCAACTGAGTAAAATGTAGGCCG
CAATCTAGGCCGCAATCTAAGCCGCACAGTAGGCCGCTTTGTGTTGTGTT
GTGCTATGTAGTATTGTGTTGTGTCGGTTTGGTTGTGTCATTTCAATAAG
AGAAACACCTGTGTGCCGCAGGGACCCAAGATACGCCCGACCAGCGACAG
TGACTATGATGATACAGACTATGTTGACACTTGGCAGGTTAGAAGCAATT
ATCATTGATATGTTTCAAAGCATGTACCTTCAGATATTGTATTCAAATAT
TTTTCTCTAGTTATTGATCAAGGTCACATTGTACACGTCACATGTTTTCA
CATGTTTTAGATTCCTATAGTGATCATCAAAGGTGGCTATATTAGCTATC
TTTGCTGATATATAGTGCAATAGGACGGACGAGGAAGGGTGGTAGGACCA
TTTGTAGATGGACAGTTTTACCTCCATTATAACGTTCTGCGCCTTTAATT
TTACTTTATCCGTAGCTGGTGGTGTGACGTTCCCTCCATATCCATCCCCT
ATGATCCTTCCCGTGTCGTCCCTATAAATGAACTATGAATTACAGTACCA
CTGATGTAATTCGTGTTTAGGCCATGGAGTCTCTTGTTGATGAAGGTCTG
ACCAGATCTCTGGGCGTGTCAAACTTCAACAGCCGGCAGGTTGACAGAGT
ACTGCAAGCGTGCAGAATCAAACCTATCGTTAATCAGGTGCGTTTAATGC
TAATGGCAATATTGCATACCACTGATTTTAAACGTTAAACATTGTACAAT
ACTAACTATTTGTCACTGTTCTGCTTTTCACTAAATCACCCAACAATACT
AATCATATCTAGATTGATCAAAGACTCTTTGTGATTTATTCAACCGACGT
TTCGGTGATCAGGGCAATTATGACCGGTTCACTCTGCAACGCAGCTGTAG
CTATTACAGATGCGGCCCTAAAAGTACTTGTAATCAAACTTTGTGTCGTT
TTTCTCCAGGTAGAACTGCACCCATACCTGCCCCAGCTGGACCTGATCAA
GTATTGTCAATCCAAGGATATCATCCTTACTGCCTACAGTCCCTTCGGCT
CGACCCCTGAAGTTGGAAAGTAGGTTGATCGTGTCCATTTTCCTCTCGTT
CAGACGAGAGAAAATCAGTGATGACATGATGTTTGTGATTTATGTTTCAG
AAGCATTGATGTCTCATAAAAGCATAAATGGTGTACAGATATATCAAGCT
TAATGACGTGGTGGCATATGTGGAGAAAATTTTGTACATTTAAAGAACAA
TTGAATCTCGTCCTGATGAGATGCCTTTTCTTTTTTACCTATTTCCTGGC
CGAGGAAAACTTTTGAGGATGTAGTGATCACAATGAAAACTATGTTACCG
TAGGTGACTGATGATGTTGCTTTCTTTCTTTCTTTCTTTCTTCTCACTGC
ATTTCTAGTGAGCCACGCTTATTGGAAGACCCAGTCGTTGTGACGATAGG
GAAAAGGCACGGGAAAACTCCCGCACAGGTCCGACTTCATATTTGTTGAC
TATGTCGCAGCCTATGAATTTGAAACACGGCATGATCTGGATCGAAAATG
CACATTGAGAAAATGCCATGTGACCCTAACGTACTGATTTAGTAACCAGC
GATCTATACTTCGATAGGCCCATGGGCTATCTTGTAGAGAAAATGGACGA
GAGAACACGTTTTCTCCTTTTCTTTTGAATTGATGATGAAGTGTTCCATG
TAGGTACTGCTCCGCTATCACCTTGAACGTGGGCTCTCCGTCCTGGCAAA
GAGTATTACCCCGGCCAGGATCCTGCAGAACCTAGAGGTACGTACGTATC
GTCATGCCCTCGCCTCAGATTCTTCACATTTGAATATATGGCTTTAGGGT
GGCGTTACATAGACATGTGTGAAATAATGGTATAGGGAATGTTTCAAGAA
GATGTGATGCAACGTTCTCTTCCGTGACTTGTTTTCAGAGAATCACATCA
GACTGTGCTTTCTCTGTAACAGTGATGTTCACCCCAGTATAAAAAAGCTA
CCTGATGGATTGCACATATAAGTAATCTGTTCTTCATTTTGTTGTTTCTT
AGGTGTTCGACTTCAGACTTACAGAAGATGACATCAGGAGTCTGAACAGT
CTGAATAGGAATCACCGATACGTCACGTGGCAATAGTGAGTATTTACTGA
ACGCATTTTCTGACGTGAGTAAACCCAGTGCTCTCCCTTCTCGGACCATC
AATAAAACGTAGCAGGCAACCGCCACTACGAACGACAACAGGAATTATAT
ATAACGTTGGGTAACATAAATTCGGGATTTTTCCGATAATGGTTGACTGA
AATCAATCTAGCAGAACAATAAACCATCCTTTTTTTCTATTATTCTGTCA
GTATCATGTACTATCTTTGCACTAATCATATATATGGTAGATTTTGTCTC
TAGTCGTGCTGACACCATAATATTTCAACTTGAAACTACCGTCCGCCGCA
CGCACAATGACAGTGCTGTCGGACAGGGGTGAACATTAATTCGGGAGAGA
AGATTCGTCTTGAATATCTTACCGCTAATTACATTTTATACAGCAGCTAT
TCGTTCCATCCTTGGCTTGAGGAGAGTGCTATGGATATAGACGTGTCCAA
GTAAAAAAAATACACGAAAAAACGGCCGTACCGCACACATCAGGCCTTCG
GGAACAACCCGTGTGTTGAGTCGGTAGAACGTCACTCAAAGTCAACCCCC
ACCGTCATGGAAATTTGTACATTATTTGTCGGGGCGTTAGCTGGATGCCG
TAGAAATGGTAATACTACTATGTCCATGTGTTTCTGCTTGTGCTAAGAGC
NCCCCACCGTCATGGAAATTTGTACATTATTCATCGGGGCGTTAGCTGGA
TGCCGTAGAAATGGTAATACTACTATGTCCATGTGTTTCTGCTTGTGCTA
AGAGCAAACTTTGAGGAAAATATCGCCATCAGTCCACTATCACACACAAC
ATTTAGACAAAAAAGTGTTCCTCGCAAACATTTGTCGTCTGCCGAATAGC
AGGATTCTGGGTAACGAATATGGCGGCGGGAAAATTCACCGTAGTGCCGT
AGCCATTGGTTGTAGCAACAAAGAGGCGTTCTGATGATTAATCACACTTA
GAGTCCAGTTGTAGGTTAGCAAAAGAGATTCTAATAAGTTGTATTGTAAA
TAATTGTGTTGAGCAGGAAGCGGATGTGACATTTGTCTTATAAACCAGCG
AACAACTATGCAGTATAATTCTCCCACGCAGCCCTCAGACTGTGACAATA
AGGGACGGAGAGTTTTTGACGTAGCCAACTTCTAATGCATGGTTATCGAA
GCTTTTCAGANTAATTCTCCCACGAAGCCCTCAGACTGTGACAATAAGGG
ACGGAGAGTTTTTGACGTAGCCAACTTCTAATGCATGGTTATCGAAGCTT
TTCAGACAGTGTTCTGAATACGTTAGTCTGTCAAGTTTGCATTTCTAGCG
GTATTACTGATGTTGCATCTAGCACATATCCCTAAATACCCCGTTTTCGA
AAAATCCCGAATTTAAGTACCCCGCGAATTTATGTTACCCAACGTTATAT
TATGTATTACGTTCGTGAAAGTTCTGACGGTAATACTTTTCAATTTACGG
GCCGATTTATACTGAACTACTGGCACACTAGTTTCTTATAGCCATACGTC
TTGCATTATAATGGTGTATTGCGTTTAAGCCATTTCACTTTTGTTTCAGC
TCCAGGACACATAAATATTACCCCTTCGATGACCAGTCAAGATCGGCACA
ATGACACTTGAAATATCACCCTACCCAAACTGGCCAACTGAATTATGTAA
CTATAATATCTGTCGTGACGATCAGTTCATAAAGATGTGTAAACTGTCAT
TATCTTTACTTAAAATGTTATATATATGGAGTACAATTATTGGGGTAGAA
TAGTTCAATTTCTGCCTCATTTTTATGAATATAAAATTCTCAAGGTTAGT
TTGTTGAACTGTACGACGTGGTCCATTATTAAAGGTAGCGACGTGCATCA
ATGCAGGTAGCTCTATACATACTATTACCGTCATTTACTGCAGACACATA
GTAGAATGTTATCTGTTTATTTGTTCAATACTTTATTTGAAAATCAACTG
TGGAGTTTAAGACACTGATAGCAATGTATGCATGTACGTGGATTGCTCCA
AGTGACGTGTCGACTAAATTTACATTCGTAGAAAGTCACATCCACCATGG
TTGATTATGCGGAGTCATTGAAGGGGAAGTACTTGTGGGTCTTGCAGCTG
AAAAGGGATGGAAAAGACTGTTACATATTGTGTATCATTATAGACGCAGA
AAGTTTGTGATAGAAATCAGACGCAAGTTTGCCATTTACACTGAATTTTC
ACAAATACCTAGATGTCTCACTACACTAGTAACTATAACAACGTTTGGTG
AATCATAGACGTAACATGAAGAGAAGTACATCAAGGGGTTCTTACAATGA
CCAGTCAACATAGCGGTTCTTCCGGTCTAGGCTGCCCAGCGTCTTGATAT
CGTCGGCGGTCAGCGAAAAGTCGAGAACCTGAAAAGAAGTATAAAAAAGT
TTCAATGTGCACGCAATATCTTCTGGATTGAGCAATAGGTCTATGAACAT
GGCATCGTGATATGGAGATGTTCCAAGTACTGTAGTTAAAATAAGAAGTA
CGTTTGATGAACATTATGTTGAGTTGAGAAGTAGAAATGTTTGGGTACTT
TACCTGTAGGTTTTCCTTGATCCTACTTGGGGTGACACTTTTCGGGATGA
CAACAATCCCGCGATCCAAGTGATAGCGCAGCAGGACCTGTAATTATTAA
TCAACAACCGCGTTTTCATTGAAAGTTCACACATTTACTAGTAGATGTCA
TGTGCGACCACTTGCAACTAAAAATGTGTTAACGAAAATGCTATAGACCT
GTGCAGGTGTCTTCCCATGGTTCTTAGCGATGTCCAGGACGACAGGGTCC
TCCAGAACCCTGGCCTCTCCTGGCTGGGCACTGCAGGGAAGGGGAAAATC
AAGGTACATGTTGGATACGTTTCATCAAGCACACTGAAACATTT Coding sequence (CDS) from alignment at Sc0000294:296542..304785- >Blg02107.6 ID=Blg02107.6|Name=Blg02107.6|organism=Branchiostoma lanceolatum|type=CDS|length=942bp|location=Sequence derived from alignment at Sc0000294:296542..304785- (Branchiostoma lanceolatum)
ATGCCGGTTAACATCCCAACTATACTTCGATCAGGTGTCAGGCTGCCTAT
TTTAGGACTTGGAACATGGAAGTCCAAACCGAACGAAGTCGCCACAGCCG
TGAAGGTGGCCATCGGTGCAGGGTACCGACACATCGACACCGCGTGGAAC
TATGGGAACGAGGCGGAGGTGGGGCAGGGGGTGAGGGCTGCCATCAGGGA
CGGGACGGTGGAGCGGAGAGAGCTGTTCATCGTCACCAAGCTGTGGTGCA
CGTTCCATCGGCCTGAGGACGTGAAACTGGGCATAGCGGACAGTCTGGAC
AAACTGGGTCTAGACTACGTGGATATGTACCTCATGCACGGTCCGCAAGG
CTTTAAGGGACCCAAGATACGCCCGACCAGCGACAGTGACTATGATGATA
CAGACTATGTTGACACTTGGCAGGCCATGGAGTCTCTTGTTGATGAAGGT
CTGACCAGATCTCTGGGCGTGTCAAACTTCAACAGCCGGCAGGTTGACAG
AGTACTGCAAGCGTGCAGAATCAAACCTATCGTTAATCAGGTAGAACTGC
ACCCATACCTGCCCCAGCTGGACCTGATCAAGTATTGTCAATCCAAGGAT
ATCATCCTTACTGCCTACAGTCCCTTCGGCTCGACCCCTGAAGTTGGAAA
TGAGCCACGCTTATTGGAAGACCCAGTCGTTGTGACGATAGGGAAAAGGC
ACGGGAAAACTCCCGCACAGGTACTGCTCCGCTATCACCTTGAACGTGGG
CTCTCCGTCCTGGCAAAGAGTATTACCCCGGCCAGGATCCTGCAGAACCT
AGAGGTGTTCGACTTCAGACTTACAGAAGATGACATCAGGAGTCTGAACA
GTCTGAATAGGAATCACCGATACGTCACGTGGCAATACTCCAGGACACAT
AAATATTACCCCTTCGATGACCAGTCAAGATCGGCACAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg02107.6-exon-Sc0000294-1570713199:304493..304785 | Blg02107.6-exon-Sc0000294-1570713199:304493..304785 | Branchiostoma lanceolatum | exon |
| Blg02107.6-exon-Sc0000294-1570713199:303571..303738 | Blg02107.6-exon-Sc0000294-1570713199:303571..303738 | Branchiostoma lanceolatum | exon |
| Blg02107.6-exon-Sc0000294-1570713199:303026..303142 | Blg02107.6-exon-Sc0000294-1570713199:303026..303142 | Branchiostoma lanceolatum | exon |
| Blg02107.6-exon-Sc0000294-1570713199:301399..301464 | Blg02107.6-exon-Sc0000294-1570713199:301399..301464 | Branchiostoma lanceolatum | exon |
| Blg02107.6-exon-Sc0000294-1570713199:300899..301015 | Blg02107.6-exon-Sc0000294-1570713199:300899..301015 | Branchiostoma lanceolatum | exon |
| Blg02107.6-exon-Sc0000294-1570713199:300517..300626 | Blg02107.6-exon-Sc0000294-1570713199:300517..300626 | Branchiostoma lanceolatum | exon |
| Blg02107.6-exon-Sc0000294-1570713199:300108..300177 | Blg02107.6-exon-Sc0000294-1570713199:300108..300177 | Branchiostoma lanceolatum | exon |
| Blg02107.6-exon-Sc0000294-1570713199:299799..299882 | Blg02107.6-exon-Sc0000294-1570713199:299799..299882 | Branchiostoma lanceolatum | exon |
| Blg02107.6-exon-Sc0000294-1570713199:299451..299533 | Blg02107.6-exon-Sc0000294-1570713199:299451..299533 | Branchiostoma lanceolatum | exon |
| Blg02107.6-exon-Sc0000294-1570713199:296542..297886 | Blg02107.6-exon-Sc0000294-1570713199:296542..297886 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000294 | genome | Sc0000294:296542..304785 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg02107 |
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