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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000294:296542..305221- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg02107.1 ID=Blg02107.1|Name=Blg02107.1|organism=Branchiostoma lanceolatum|type=mRNA|length=8680bp|location=Sequence derived from alignment at Sc0000294:296542..305221- (Branchiostoma lanceolatum)
TGTCTGCTTAGCCTTTACTTTGTTAATATGGGTACCCCACAGTTCAGTCC
AGTTGTTGATGTAACGCCTAGGCTAGGTACGGGTGGCTTTTTGTAAGTTG
CTAGGGCCTGTCCACAGAACTGTTGTAGGTGGTTACATTTGGGGTTCGTT
TGTTTGTTATGTGCATTATGTAACATTTTTCGGGATTAAACTGCATGATT
TGCTTTGCCATTCCTCGATCTGCGTTCAGATCTGCTTGCAGGAGTTGTGA
ATCATTCTGTGTAGATAACTCTATATATAACAGGCAGTCATCGGTAAATA
ACCTCACAAATGTTGTTCAAATCAAGCTGGCCTGGCAAGTCATATATGTA
CAAGAGGAAGAGCAACTTGGTTCCTTGTGGAACGCCTGACGCAACTCTAT
TAAATTGGAGCTGAGGCCTTCCCTTCTACCACTGCCGTCTGACCACATGC
ATACACGTTGCGTCTGTTTGAGATAAGCAAACACCTTGCGTCTATTTGGG
ATAAGCAAACACCTTGCGTCTGTTTGGGATAAGCAAACACATTTACGTTT
GTTTGCCGGATAATCAGGTGAGGTCATACAGCGGACAAAGGTCACAGTGC
ACGAGGGTCAACGTGCAACTGAACTGGCCGTCTGTGTATGAATATGACCG
ATGTAACATGCCGGTTAACATCCCAACTATACTTCGATCAGGTGTCAGGC
TGCCTATTTTAGGACTTGGAACATGGAAGGTGACTAATATCTATTGATTT
TACATGTTAAACATGGTTCAGGGGACATATGTTGATCGTACTTCTCGGAC
TTTTGACACCTGCCTGCCCGTCCCAAATGCTTCCGGCAAGGAGGTTAAGA
TGATTTTAACGTCCTTGCTTCAGGCACGAATTCATGCCACGCTTACGGCA
TAACAGCGTTATGCGACGGAAAGGTTTCATTATCGCTAGTAACTATATAC
CTCTGTTATTTGATATACGACTTCCACAGTTCGACAATGTTCGGCTCTGG
AAAATAAATCTTGGTCTGCAGTTAAACNCACACACACACACACACACACA
CACACACACACACACACACACACACACACACACACACACACACACACACA
CACGCACACAATCCACTAAGTACTTTTAAATAAGCTTGCAGTCAACTTTG
AATATTATGATTTTTGTTGCCGCGTCATTTCAACAAATGGATTTCACTAC
TGAAGATAGCTGTAGGATCATGAAACTGCAACCTGTGTGTTTTAGTGGTA
GATTGTAAATGTTCATCGTCACCAAGGTAAATGGTTTGGTCTGGTATAAT
CATTCCTGTCTGATGACTTAAATCTTGTACGTTTTCTACCTTTATATTCC
GCGTAACTGTCATGTGTAATCAACCATTGGCATATCAAAACCGCGAAAAA
CGTCGTCATTTATGTTTCTTAGCATGATATCATCCAATCTTTCTTAGTAG
CTAATCAAATATGTCCTTTATGACTGTGAATAGTCCAAACCGAACGAAGT
CGCCACAGCCGTGAAGGTGGCCATCGGTGCAGGGTACCGACACATCGACA
CCGCGTGGAACTATGGGAACGAGGCGGAGGTGGGGCAGGGGGTGAGGGCT
GCCATCAGGGACGGGACGGTGGAGCGGAGAGAGCTGTTCATCGTCACCAA
GGTAAGACGTAAAATCCCCTCTCTCCCTGGACCCGCGGCACGTTGGCGGC
GTCACAGCGTCCTAGACTGGATTTTATATTGGGAATATCATGCCGTTGAT
ACGTACCAGTATGACTGAAAAGACAACAAAACACATGCACGAAGCTTGAA
AAGATTCGTTTTTCATCGATGAAATCGGCTGGTCGCAGCGAGTCGCCAGC
GTGCCGCGGTTCCAGTGAGATAGGGGTTTTAGTCGGTAGCTCAGAAATAC
ACTGATATATGTTCGGTAGCTACAAATAGTCCACTTTGGGCTCAGTGATA
GATTTGTTCAACATATTTTGCTGACGATAAGATCCATGCATGCCACTGGT
TATTTCACTAATCATGTGACGCGAACAGATATCATCTCCTCTTTAAAATC
AGTGCACCTTTTACCTCATGTCTGTACAGCTGTGGTGCACGTTCCATCGG
CCTGAGGACGTGAAACTGGGCATAGCGGACAGTCTGGACAAACTGGGTCT
AGACTACGTGGATATGTACCTCATGCACGGTCCGCAAGGCTTTAAGGTTA
GCATAGCATACTTTGGACAGGGTGAACTGGCGTGTATCAAACTTTGAATG
GCCAAACATGCAAGTGGTATACGTCCTAGCAATGTCATAGTTGCAGGTAA
ACGTAAATTCGTAATCAGTTAGATCTTTTATTGCTTTTTAAAGGTGAGAT
ACAGCAATAACCAAAATTCCCTTCCATTTTGCTTATAAAGGTAATTTCAA
ATCAAGGTTTGAAACATCTAGTGCACAATCTAGGCCGAAATCTAGGCCGA
AATCTATGACGCAAAGTCACATGTAGGCCGCAATCTAGGCCGCAAAGTAA
AATGTAGGCCGCAATCAAGGCCGCAAAGTAAATTGTAGGCCGCAATCTAG
GCCGCAATCTAGGCCGCAATCTAGGCCGCAATCTAGGCCGCAATCTAGGC
CGCAAAGAAAAATCCAGGCCGCAATCTAGGCCGCAAAGTAAAATCTAGGC
CGCAAAGTAAAATCTAGGCCGCAATCTATGCCGCAAAGTAACATGTAGGC
TGCAATCTAGGCCGCAATCTAAGCCACAATCTAGGCCGCAAACTAAGCCG
CACAGTAGGCCGCAATCTAGGCCGTACAGTAGGTCGCAATCTAGGCCGCA
ATCTAGGCCGCAATCTAGGGCGCAATCTAGGCCGACAAGTAAAATGTAGG
CCGCAATCTAGGCCGCAATCTATGCCGCACAGTAAAATGTAGGCCGCAAT
GTAAAATCTAGGCCGCAGTCTAGGCCGCAAAGTAAAATGTAGGCCGCAAT
CTAGGCCGCAATTAGAGCCGCACAGTAGGCCGCAATCTAGGCCGCAAAGT
AAAATGTAGGCCGCAATCAAGGCCGCAAAGTAAATTGTAGGCGGCAATCA
AAGTCACATGTAGGCCGCAATCTAGGCCGCAAAGTAAAATGTAGGCCGCA
ATCTAGGCCGCAAAGTAAAATGTAGGCCGCAATCTAGGCCGCAAAGTAAA
ATGCAGGCCGCAATCTAGGCCGCAATCTAGGCCGCACAGTAAAATCTAGG
CCGCAATGTAAAATCTAGGCCGCGATCTAGGCCGCAAAGTAACATGTAGG
CTGCAATCTAGGCCACAATCTAGGGCGCCATATATAGGCCGCAATCTAAG
CCGCACAGTAGGTCGCAATCTAGGCTGCAATCTAGGCCGCAATCTAGGCC
GCAATGTAAAATCTAGGCCGCAATGTAAAATCTAGGCCGCAATGTAAAAT
CTAGGCCGCGATCTAGGCCGCAAAGTAAACTGTAGGCCGCAATCTAGGCC
GCAATCTAAGCCGCACAGTAGGCCGCAATCTAGGCCGCAATCTAAGNGTA
GGCCGCAATCTAGGCCGCAAAGTAAAATGTAGGCCGCAATCTAGGCCGCA
ATCTAAGCCGCACAGTAGGCCGCAATCTAGGCCGCAATGTAAAATCTAGG
CCGCATCTAGGCCGCAACTGAGTAAAATGTAGGCCGCAATCTAGGCCGCA
ATCTAAGCCGCACAGTAGGCCGCTTTGTGTTGTGTTGTGCTATGTAGTAT
TGTGTTGTGTCGGTTTGGTTGTGTCATTTCAATAAGAGAAACACCTGTGT
GCCGCAGGGACCCAAGATACGCCCGACCAGCGACAGTGACTATGATGATA
CAGACTATGTTGACACTTGGCAGGTTAGAAGCAATTATCATTGATATGTT
TCAAAGCATGTACCTTCAGATATTGTATTCAAATATTTTTCTCTAGTTAT
TGATCAAGGTCACATTGTACACGTCACATGTTTTCACATGTTTTAGATTC
CTATAGTGATCATCAAAGGTGGCTATATTAGCTATCTTTGCTGATATATA
GTGCAATAGGACGGACGAGGAAGGGTGGTAGGACCATTTGTAGATGGACA
GTTTTACCTCCATTATAACGTTCTGCGCCTTTAATTTTACTTTATCCGTA
GCTGGTGGTGTGACGTTCCCTCCATATCCATCCCCTATGATCCTTCCCGT
GTCGTCCCTATAAATGAACTATGAATTACAGTACCACTGATGTAATTCGT
GTTTAGGCCATGGAGTCTCTTGTTGATGAAGGTCTGACCAGATCTCTGGG
CGTGTCAAACTTCAACAGCCGGCAGGTTGACAGAGTACTGCAAGCGTGCA
GAATCAAACCTATCGTTAATCAGGTGCGTTTAATGCTAATGGCAATATTG
CATACCACTGATTTTAAACGTTAAACATTGTACAATACTAACTATTTGTC
ACTGTTCTGCTTTTCACTAAATCACCCAACAATACTAATCATATCTAGAT
TGATCAAAGACTCTTTGTGATTTATTCAACCGACGTTTCGGTGATCAGGG
CAATTATGACCGGTTCACTCTGCAACGCAGCTGTAGCTATTACAGATGCG
GCCCTAAAAGTACTTGTAATCAAACTTTGTGTCGTTTTTCTCCAGGTAGA
ACTGCACCCATACCTGCCCCAGCTGGACCTGATCAAGTATTGTCAATCCA
AGGATATCATCCTTACTGCCTACAGTCCCTTCGGCTCGACCCCTGAAGTT
GGAAAGTAGGTTGATCGTGTCCATTTTCCTCTCGTTCAGACGAGAGAAAA
TCAGTGATGACATGATGTTTGTGATTTATGTTTCAGAAGCATTGATGTCT
CATAAAAGCATAAATGGTGTACAGATATATCAAGCTTAATGACGTGGTGG
CATATGTGGAGAAAATTTTGTACATTTAAAGAACAATTGAATCTCGTCCT
GATGAGATGCCTTTTCTTTTTTACCTATTTCCTGGCCGAGGAAAACTTTT
GAGGATGTAGTGATCACAATGAAAACTATGTTACCGTAGGTGACTGATGA
TGTTGCTTTCTTTCTTTCTTTCTTTCTTCTCACTGCATTTCTAGTGAGCC
ACGCTTATTGGAAGACCCAGTCGTTGTGACGATAGGGAAAAGGCACGGGA
AAACTCCCGCACAGGTCCGACTTCATATTTGTTGACTATGTCGCAGCCTA
TGAATTTGAAACACGGCATGATCTGGATCGAAAATGCACATTGAGAAAAT
GCCATGTGACCCTAACGTACTGATTTAGTAACCAGCGATCTATACTTCGA
TAGGCCCATGGGCTATCTTGTAGAGAAAATGGACGAGAGAACACGTTTTC
TCCTTTTCTTTTGAATTGATGATGAAGTGTTCCATGTAGGTACTGCTCCG
CTATCACCTTGAACGTGGGCTCTCCGTCCTGGCAAAGAGTATTACCCCGG
CCAGGATCCTGCAGAACCTAGAGGTACGTACGTATCGTCATGCCCTCGCC
TCAGATTCTTCACATTTGAATATATGGCTTTAGGGTGGCGTTACATAGAC
ATGTGTGAAATAATGGTATAGGGAATGTTTCAAGAAGATGTGATGCAACG
TTCTCTTCCGTGACTTGTTTTCAGAGAATCACATCAGACTGTGCTTTCTC
TGTAACAGTGATGTTCACCCCAGTATAAAAAAGCTACCTGATGGATTGCA
CATATAAGTAATCTGTTCTTCATTTTGTTGTTTCTTAGGTGTTCGACTTC
AGACTTACAGAAGATGACATCAGGAGTCTGAACAGTCTGAATAGGAATCA
CCGATACGTCACGTGGCAATAGTGAGTATTTACTGAACGCATTTTCTGAC
GTGAGTAAACCCAGTGCTCTCCCTTCTCGGACCATCAATAAAACGTAGCA
GGCAACCGCCACTACGAACGACAACAGGAATTATATATAACGTTGGGTAA
CATAAATTCGGGATTTTTCCGATAATGGTTGACTGAAATCAATCTAGCAG
AACAATAAACCATCCTTTTTTTCTATTATTCTGTCAGTATCATGTACTAT
CTTTGCACTAATCATATATATGGTAGATTTTGTCTCTAGTCGTGCTGACA
CCATAATATTTCAACTTGAAACTACCGTCCGCCGCACGCACAATGACAGT
GCTGTCGGACAGGGGTGAACATTAATTCGGGAGAGAAGATTCGTCTTGAA
TATCTTACCGCTAATTACATTTTATACAGCAGCTATTCGTTCCATCCTTG
GCTTGAGGAGAGTGCTATGGATATAGACGTGTCCAAGTAAAAAAAATACA
CGAAAAAACGGCCGTACCGCACACATCAGGCCTTCGGGAACAACCCGTGT
GTTGAGTCGGTAGAACGTCACTCAAAGTCAACCCCCACCGTCATGGAAAT
TTGTACATTATTTGTCGGGGCGTTAGCTGGATGCCGTAGAAATGGTAATA
CTACTATGTCCATGTGTTTCTGCTTGTGCTAAGAGCNCCCCACCGTCATG
GAAATTTGTACATTATTCATCGGGGCGTTAGCTGGATGCCGTAGAAATGG
TAATACTACTATGTCCATGTGTTTCTGCTTGTGCTAAGAGCAAACTTTGA
GGAAAATATCGCCATCAGTCCACTATCACACACAACATTTAGACAAAAAA
GTGTTCCTCGCAAACATTTGTCGTCTGCCGAATAGCAGGATTCTGGGTAA
CGAATATGGCGGCGGGAAAATTCACCGTAGTGCCGTAGCCATTGGTTGTA
GCAACAAAGAGGCGTTCTGATGATTAATCACACTTAGAGTCCAGTTGTAG
GTTAGCAAAAGAGATTCTAATAAGTTGTATTGTAAATAATTGTGTTGAGC
AGGAAGCGGATGTGACATTTGTCTTATAAACCAGCGAACAACTATGCAGT
ATAATTCTCCCACGCAGCCCTCAGACTGTGACAATAAGGGACGGAGAGTT
TTTGACGTAGCCAACTTCTAATGCATGGTTATCGAAGCTTTTCAGANTAA
TTCTCCCACGAAGCCCTCAGACTGTGACAATAAGGGACGGAGAGTTTTTG
ACGTAGCCAACTTCTAATGCATGGTTATCGAAGCTTTTCAGACAGTGTTC
TGAATACGTTAGTCTGTCAAGTTTGCATTTCTAGCGGTATTACTGATGTT
GCATCTAGCACATATCCCTAAATACCCCGTTTTCGAAAAATCCCGAATTT
AAGTACCCCGCGAATTTATGTTACCCAACGTTATATTATGTATTACGTTC
GTGAAAGTTCTGACGGTAATACTTTTCAATTTACGGGCCGATTTATACTG
AACTACTGGCACACTAGTTTCTTATAGCCATACGTCTTGCATTATAATGG
TGTATTGCGTTTAAGCCATTTCACTTTTGTTTCAGCTCCAGGACACATAA
ATATTACCCCTTCGATGACCAGTCAAGATCGGCACAATGACACTTGAAAT
ATCACCCTACCCAAACTGGCCAACTGAATTATGTAACTATAATATCTGTC
GTGACGATCAGTTCATAAAGATGTGTAAACTGTCATTATCTTTACTTAAA
ATGTTATATATATGGAGTACAATTATTGGGGTAGAATAGTTCAATTTCTG
CCTCATTTTTATGAATATAAAATTCTCAAGGTTAGTTTGTTGAACTGTAC
GACGTGGTCCATTATTAAAGGTAGCGACGTGCATCAATGCAGGTAGCTCT
ATACATACTATTACCGTCATTTACTGCAGACACATAGTAGAATGTTATCT
GTTTATTTGTTCAATACTTTATTTGAAAATCAACTGTGGAGTTTAAGACA
CTGATAGCAATGTATGCATGTACGTGGATTGCTCCAAGTGACGTGTCGAC
TAAATTTACATTCGTAGAAAGTCACATCCACCATGGTTGATTATGCGGAG
TCATTGAAGGGGAAGTACTTGTGGGTCTTGCAGCTGAAAAGGGATGGAAA
AGACTGTTACATATTGTGTATCATTATAGACGCAGAAAGTTTGTGATAGA
AATCAGACGCAAGTTTGCCATTTACACTGAATTTTCACAAATACCTAGAT
GTCTCACTACACTAGTAACTATAACAACGTTTGGTGAATCATAGACGTAA
CATGAAGAGAAGTACATCAAGGGGTTCTTACAATGACCAGTCAACATAGC
GGTTCTTCCGGTCTAGGCTGCCCAGCGTCTTGATATCGTCGGCGGTCAGC
GAAAAGTCGAGAACCTGAAAAGAAGTATAAAAAAGTTTCAATGTGCACGC
AATATCTTCTGGATTGAGCAATAGGTCTATGAACATGGCATCGTGATATG
GAGATGTTCCAAGTACTGTAGTTAAAATAAGAAGTACGTTTGATGAACAT
TATGTTGAGTTGAGAAGTAGAAATGTTTGGGTACTTTACCTGTAGGTTTT
CCTTGATCCTACTTGGGGTGACACTTTTCGGGATGACAACAATCCCGCGA
TCCAAGTGATAGCGCAGCAGGACCTGTAATTATTAATCAACAACCGCGTT
TTCATTGAAAGTTCACACATTTACTAGTAGATGTCATGTGCGACCACTTG
CAACTAAAAATGTGTTAACGAAAATGCTATAGACCTGTGCAGGTGTCTTC
CCATGGTTCTTAGCGATGTCCAGGACGACAGGGTCCTCCAGAACCCTGGC
CTCTCCTGGCTGGGCACTGCAGGGAAGGGGAAAATCAAGGTACATGTTGG
ATACGTTTCATCAAGCACACTGAAACATTT Coding sequence (CDS) from alignment at Sc0000294:296542..305221- >Blg02107.1 ID=Blg02107.1|Name=Blg02107.1|organism=Branchiostoma lanceolatum|type=CDS|length=942bp|location=Sequence derived from alignment at Sc0000294:296542..305221- (Branchiostoma lanceolatum)
ATGCCGGTTAACATCCCAACTATACTTCGATCAGGTGTCAGGCTGCCTAT
TTTAGGACTTGGAACATGGAAGTCCAAACCGAACGAAGTCGCCACAGCCG
TGAAGGTGGCCATCGGTGCAGGGTACCGACACATCGACACCGCGTGGAAC
TATGGGAACGAGGCGGAGGTGGGGCAGGGGGTGAGGGCTGCCATCAGGGA
CGGGACGGTGGAGCGGAGAGAGCTGTTCATCGTCACCAAGCTGTGGTGCA
CGTTCCATCGGCCTGAGGACGTGAAACTGGGCATAGCGGACAGTCTGGAC
AAACTGGGTCTAGACTACGTGGATATGTACCTCATGCACGGTCCGCAAGG
CTTTAAGGGACCCAAGATACGCCCGACCAGCGACAGTGACTATGATGATA
CAGACTATGTTGACACTTGGCAGGCCATGGAGTCTCTTGTTGATGAAGGT
CTGACCAGATCTCTGGGCGTGTCAAACTTCAACAGCCGGCAGGTTGACAG
AGTACTGCAAGCGTGCAGAATCAAACCTATCGTTAATCAGGTAGAACTGC
ACCCATACCTGCCCCAGCTGGACCTGATCAAGTATTGTCAATCCAAGGAT
ATCATCCTTACTGCCTACAGTCCCTTCGGCTCGACCCCTGAAGTTGGAAA
TGAGCCACGCTTATTGGAAGACCCAGTCGTTGTGACGATAGGGAAAAGGC
ACGGGAAAACTCCCGCACAGGTACTGCTCCGCTATCACCTTGAACGTGGG
CTCTCCGTCCTGGCAAAGAGTATTACCCCGGCCAGGATCCTGCAGAACCT
AGAGGTGTTCGACTTCAGACTTACAGAAGATGACATCAGGAGTCTGAACA
GTCTGAATAGGAATCACCGATACGTCACGTGGCAATACTCCAGGACACAT
AAATATTACCCCTTCGATGACCAGTCAAGATCGGCACAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg02107.1-exon-Sc0000294-1570713199:305098..305221 | Blg02107.1-exon-Sc0000294-1570713199:305098..305221 | Branchiostoma lanceolatum | exon |
| Blg02107.1-exon-Sc0000294-1570713199:304493..304654 | Blg02107.1-exon-Sc0000294-1570713199:304493..304654 | Branchiostoma lanceolatum | exon |
| Blg02107.1-exon-Sc0000294-1570713199:303571..303738 | Blg02107.1-exon-Sc0000294-1570713199:303571..303738 | Branchiostoma lanceolatum | exon |
| Blg02107.1-exon-Sc0000294-1570713199:303026..303142 | Blg02107.1-exon-Sc0000294-1570713199:303026..303142 | Branchiostoma lanceolatum | exon |
| Blg02107.1-exon-Sc0000294-1570713199:301399..301464 | Blg02107.1-exon-Sc0000294-1570713199:301399..301464 | Branchiostoma lanceolatum | exon |
| Blg02107.1-exon-Sc0000294-1570713199:300899..301015 | Blg02107.1-exon-Sc0000294-1570713199:300899..301015 | Branchiostoma lanceolatum | exon |
| Blg02107.1-exon-Sc0000294-1570713199:300517..300626 | Blg02107.1-exon-Sc0000294-1570713199:300517..300626 | Branchiostoma lanceolatum | exon |
| Blg02107.1-exon-Sc0000294-1570713199:300108..300177 | Blg02107.1-exon-Sc0000294-1570713199:300108..300177 | Branchiostoma lanceolatum | exon |
| Blg02107.1-exon-Sc0000294-1570713199:299799..299882 | Blg02107.1-exon-Sc0000294-1570713199:299799..299882 | Branchiostoma lanceolatum | exon |
| Blg02107.1-exon-Sc0000294-1570713199:299451..299533 | Blg02107.1-exon-Sc0000294-1570713199:299451..299533 | Branchiostoma lanceolatum | exon |
| Blg02107.1-exon-Sc0000294-1570713199:296542..297886 | Blg02107.1-exon-Sc0000294-1570713199:296542..297886 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000294 | genome | Sc0000294:296542..305221 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg02107 |
|
