Blg02095.1 (mRNA) - B. lanceolatum

Overview
NameBlg02095.1
Unique NameBlg02095.1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Full-screen view
Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000294:80676..84679-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg02095.1 ID=Blg02095.1|Name=Blg02095.1|organism=Branchiostoma lanceolatum|type=mRNA|length=4004bp|location=Sequence derived from alignment at Sc0000294:80676..84679- (Branchiostoma lanceolatum)
ATCAACTCGGAATCAAGATGGCCGCCACGTTAGCAATGTTTTTTCGATAA
CACATCACGGACTTTTGAAGCGCTTAAAAGTTAAGGAAAACTTCACCAAT
TTTTAACAGTTTGTAGGGATTTATTTAAAAGAGTCTATAGCATCGAACTG
GGGGGAAAAGGATGCACTGGTTAGAACAGAGCTCGCAGAAATGACTGTCG
ATCCCAGGATTGTTTGTGTGTGTCACAGTTATAAAAGCATGCCAGGTCAC
CGGTCTGAGTCATCATCATCCGCACACTGACAGCTGGTGCGACGTAAGGC
GTGTTGTCGTACCCTACTTCAGAAACATCTGTGTAACAACAAGGCACAGG
TAAGAGATGATCTATTATATGATCGGACGACCAGCGTTGGCCGTTTAGAA
ATACTGGTCTAAATTCACAAAAATTATGGCCTCTTTCATAAAAAATAAAA
ATAAAAAATTCACATAACATATAGGTCAAAATGGCATCTGGGTTAGTTCA
GCGTTTTATCAGTGCAGTTTACATGGCAGTAATTGCGAGTTTGAAGAGAA
AAGAAGGTAAGAAGTTAAGTGTCAGAACTGTAAACAACTGGAATTCTTTA
CCGGATAAAGAAGATAGCATAAACCAGTTCAAGACTAGGCTAGATGAGCA
CTGGGAAGGGCGCAAGTACACAGTGTGAACAAGTGAAGACCAGGACATAA
CAGGCGGATGCCTGCTCTCCTGTAAGAAGTACATGTATGAAGGTTTCAAG
GTAAGATACAGGTAAAAATTTTCTGTTATGATTCATCCCATGTCTTTACC
TTTGCATAGGAAAGAAAGCCGTTCCTGTGGTCTGAAGAAGATGGCGGGTC
ACTTCAGAAGTTACGTGTGGGACCCCACCCTCATCCTGCTGCAGATCATC
ACTGTGCAGAGTGTGTTCTACGGGGGAATGGGACTCTGGATATTCATCAT
CGACTTCTTTGCAGACGAGACTAGATCGCTGGATCAAATATTTTCATATG
AGGTAATAAACTAAGGAACTACTTTGTCCTCTTTCGTGGCGGTTGTATTG
TAGTTGGGTTTGGTGTTTTCCCCAACAGGCACATTTTGAAAATCTTTGAT
TTGACTGGAGTTTCCTTCTTTGTCACCTCTACAATATTTATTGTTTCATC
CAACCAATGACCTTGCTCCAACTATACGCTTGTCTCACTAAAGGAAACAA
TGCCTCACTAAAGGAAACAATGTCTCACTAAAGGAAACGACACCCAAATG
CTTACCTACCTATTGTTTGTAGCAATTACATGTCTATTTTCAGTATTCCT
TTTACTCTTAGCCCCTTCACACTCTGTTTGGTGTCCTGCTGGTACATTAC
AATGCAATGATTTAAAAATAAAGCTATGATGTAAAATGTATGTTACAGGC
TTTGTTTTGGCTTTACACCTTTTTAGTAAGCCTAAAAAGAAGAACCTATT
GTAATTGGTAATTACAGTTGTAATTATGATTGACATATTTTCCTCCTCAT
CTGACTCCTCACATCTGTCACCCTGCAGCTTCTAGACTTCAGGTCATCCC
GGGGCAGACTAATGATGGCAGCGTATGTATTAAATGCACTTACAGGGTAA
GGAACTTTCCTCATTGGGCATTCTGCTTCTGAACTTACTGCTTATCAAGT
TGTCACATTATAGTCTCTTCTCCATTGTATTGATGTCTCTATAGAGTGGA
TTTGTCAGATGCTTCCATCTAAAAGAGTCATTGGATTCTTAAATGGTAGA
TGTTCATGTATTTTTTTTTTAAAGGAATTAGACCTAAAATCTTATCAGAT
GGTGTTTGCTGATTTATTTCTAACAGGAATTACATTTTTCTTGTATCACA
CAGGGCTTTAGGACTTTTGTTCATAGTAGGGAGAGCAAAACAGGTACATA
TTGTTACTTTTCTTTATACACATACCCAGTTGCTTTTAGTACTTTTGTAA
ACTGCTATTTGTGTCATGTTGAATTTAAGAGGTTAAGGAAGTAGGAAGAT
AACTGTGATGTTAACATGACAAAAGTTTTCCAAACTTCTTTACATATTTG
GCAGGATAGGGTTTTTGCTTCACAGTAAAGGGATTAGAAAAAAACTGCAT
GTCCACTATATCAATGTCACATCCTTGTAGTGTGTGCTGCACTCTCAGGT
GCAACACATCTCTGTTCTTGATTTTGATTCATTCTTCCTTTTCCTCCTCA
GTGTGTAGACTTCACAGTGACTGCACATCTATTCAACTTCGTAGGCTGCT
GGATCTACAACCAACACTTCCCCACATCCCTAGTGTGGTGGCTGCTGAAC
ATTGTGTGTATAGCTCTCATGGCCGTCATCGGTGAGTTCCTCTGCATGAG
ACAAGAAATGCAATCCATTCCCGTCAGCATAGGTCAGAAGGTGGACCTAT
GACACACCCAGCAAGCTGACTGTTTTGTGGCAGACTGTGGGAGAACTGAA
GCTTCACTCATCTGTTTCCGTGTGGCATGGACAACAGCCACACACTGTAT
GGAAAAGTATGGCCAACACAGCTTTGTGAAAGAGCATGGAAATGGACCTC
TTCCCACATACACAGTTCATGGCACAGTTCATGCTCAATAAAATAGAATC
AGAACAAAACCTTTTCCTTGATGTTTTTATTCCTATTCATTTGTGTTAAC
TTCAATGCATATGATGCTCAGGTATATCAATACCATGTTTTATTAATGTA
CTGTTGTTTCATTAAAAAGTGGTAGATGACTATACAGACAAGTAAGAAGC
ACGTCAATGCTCTATTCACACCTTTATACATATGAATTTGATAATGATTA
TCTTATATTTGTCGGATTGTCTCCTGCTGGCATATGGTGGAGGACTGTCA
ACTTTTATGAGTTAAACTTGCTGACAAAGGGAAGTTTAGTATTGCCATAC
CAAGTAAATGGAAGAACTAGATAATAAATGAAACAACAGATTACTTTGGA
CAGAATTTGTGTAGACTAATCTTGTCACAGCTATTTGTACTTAGCACTAC
ATGTATTTGTATAAGTAACCAATCCTCCATATACAGAGGATATATTTTGT
AAAGTTGTTCAATATGATGTACAGAGAGTGTATATATATATCTAACAAAG
TACAGAACACAATGTGAAGGTTTCGAATGATAGTCATGTTTTGAAATTGC
CTATGTAACCAACACATAGGCGATATTAAATTTTGATAGGCAATGGTATA
TTCAAGGATGTATGAATAGTTGAATGCCATGAAACAAAGGAATAACTAGT
ATCCTGCTTGTATCCATGTGTATGTGTGGACTCAGTAAGTATTGATACTA
ATAGCTTGGATTCTGCACAGGTTGAAATGAATAGACTACTTGACTAAATG
TGTTCATGGAATATCCTCCTTGGTTCATGATCAGTGTTCTGGTGTGTCAT
TACTTCAAATACACAGTTACAAACTCATATTCTAAAGTGCGGTAGAAAAC
GCAATAATGGAACATTGTACTTACCTGCAGTTCAATCACAATTCATATAC
CAAATGAAAGCCACAGGAAAGCCAAGGGTCTAGTTGATAAACAGAGAAAC
CTGTCTCCTTGCACCAACCAAAACTATTGAACAAAGTAAATTTGGATGGA
AAAGACTAGTTAAGTACACTTTTCTGTTGTTCCTCGCCCAAAAGAAAGCA
AAAATGTTTGTAAAAATTTCTTAAAGCAATTCCGTGCAAATATGCATCTG
ATAACCAGGTTTAATTTACTAGCACTGTTCACCCATGGGCGTCCATACTG
AGCTGCGCTGCTGTACTGTAGCGTTTGCCCTAGTCTCCCTACTTTCCTTT
ATTTCCTTAGTTTCTGTGTTTTTGCTGGTTTCGCTAGTGTCCATACTTTC
TTTTCATTCTTTCCTTGGTTTCCTTACATTTGACTGCAGGAGCTCCCTGA
AATGCTTATTCTACAATTGAATTGGAACATTTAAAACAGCGAGTCGAGGT
TGAAGATTTCATCGAACACTTTTATTCAAAATAAATAATAAAGCTAATGA
TTCT

Coding sequence (CDS) from alignment at Sc0000294:80676..84679-

>Blg02095.1 ID=Blg02095.1|Name=Blg02095.1|organism=Branchiostoma lanceolatum|type=CDS|length=471bp|location=Sequence derived from alignment at Sc0000294:80676..84679- (Branchiostoma lanceolatum)
ATGGCGGGTCACTTCAGAAGTTACGTGTGGGACCCCACCCTCATCCTGCT
GCAGATCATCACTGTGCAGAGTGTGTTCTACGGGGGAATGGGACTCTGGA
TATTCATCATCGACTTCTTTGCAGACGAGACTAGATCGCTGGATCAAATA
TTTTCATATGAGCTTCTAGACTTCAGGTCATCCCGGGGCAGACTAATGAT
GGCAGCGTATGTATTAAATGCACTTACAGGGGCTTTAGGACTTTTGTTCA
TAGTAGGGAGAGCAAAACAGTGTGTAGACTTCACAGTGACTGCACATCTA
TTCAACTTCGTAGGCTGCTGGATCTACAACCAACACTTCCCCACATCCCT
AGTGTGGTGGCTGCTGAACATTGTGTGTATAGCTCTCATGGCCGTCATCG
GTGAGTTCCTCTGCATGAGACAAGAAATGCAATCCATTCCCGTCAGCATA
GGTCAGAAGGTGGACCTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg02095.1Blg02095.1-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg02095.1-exon-Sc0000294-1570713199:84331..84679Blg02095.1-exon-Sc0000294-1570713199:84331..84679Branchiostoma lanceolatumexon
Blg02095.1-exon-Sc0000294-1570713199:83678..83870Blg02095.1-exon-Sc0000294-1570713199:83678..83870Branchiostoma lanceolatumexon
Blg02095.1-exon-Sc0000294-1570713199:83084..83151Blg02095.1-exon-Sc0000294-1570713199:83084..83151Branchiostoma lanceolatumexon
Blg02095.1-exon-Sc0000294-1570713199:82787..82826Blg02095.1-exon-Sc0000294-1570713199:82787..82826Branchiostoma lanceolatumexon
Blg02095.1-exon-Sc0000294-1570713199:82036..82478Blg02095.1-exon-Sc0000294-1570713199:82036..82478Branchiostoma lanceolatumexon
Blg02095.1-exon-Sc0000294-1570713199:80676..81775Blg02095.1-exon-Sc0000294-1570713199:80676..81775Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000294genomeSc0000294:80676..84679 -
Properties
Property NameValue
GeneIDBlg02095