|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000294:103846..108673+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg02091.3 ID=Blg02091.3|Name=Blg02091.3|organism=Branchiostoma lanceolatum|type=mRNA|length=4828bp|location=Sequence derived from alignment at Sc0000294:103846..108673+ (Branchiostoma lanceolatum)
AAGGTAATGCGCATTGACGGAGAATGATAAAACGATATCATTCTAGGTCA
TCGACGTGCTCAGAAGCGGCATCTGTCGACTTACATTCAAATTGCAACCG
ATTGAAAGATGACCTTTCAACTTTAGCCTTGCCATTTGTGAATGTAAGCA
GCTTGGGACACCGACAAGGTGCGTACGTACGTTGGAACCACTTTACTTTC
TTTCTAGCTGTCTGTGTTTCTTCGTCTCAAGATTTATCTACTTCATTCGC
TACTTGCTTGATATATAAAGATTCATATGACGCGCCCAAGGCTGGCGAAG
TGGATTGTGACAAACAGAAGGCAGGTGTGTCTCGTGGAGGTAACATTTCC
TCATGACATATTAGTTCAAATTTCAGCGTCTATCTGTTGCACTAAGTTGC
AGCAGTTGAACAGGGTGTAGTCCACCGATATCTTCACGTTTAATAGTTAT
ATAATCAATGGAGGGACANATTTCAGCGTCTATCTGTTGCACTAAGTTGC
AGCAGTTGAACAGGGTGTAGTCCACCGATATCTTCACGTTTAATAGTTAT
ATAATCAATGGAAGGACAAGACTCATAAAGGGGAGGGGGGCTGGAGGGAT
CAAGAACGTTCACAGACTACCTAACACCAGCCGACCTTGAACTTGGATTT
CAACAGGTAAAGGTGAAATATTATTGCAAACATCCGAACGGTTGTCGAGA
TATCAGCTTTGCACTTCAGGGCCTAGCCTGCCGGACGGTATATGAATGAA
TGAATGAATGAATGGATGATTTATTGCACAACAATTGCATCAGTGGCAAT
GTATGGCACTATAGGGTATACGGTAGACAAGGCCCATATGACAAATTTAC
TATTCTGGTGGTCTTTTTGCTCATAAAAGGGATTATTACTGTATAGTCTA
ACGTTCTGAGTGATTTAAGGTTAGGGTTTGACATACTAGGCGACAAAAGG
GGGGGATGTAAGCGGTGTTCTGGTCCCAGACTGATCGAACACGTGACCTC
TAGGACTAGTCTCCAAGCAGACCTACGGGTTGGCAAAGACCGTATCCAAC
AGGCAGAAGGAGTTTTATAGCCAACCCAAGTCTCATAGCCAAGGTTGGCT
ATGAGACTCCTTCTGCCTGTTGGATACGGTCTTTGCCAATCCGTAGGTCT
GCTTGGAGACTAACCTTACAAACAAAAGTAAACTTGAACGGTTGAAAGGC
CAGTCGAGCAGCGAGCTACTCTAGACCCTGACTTTAGATCACCGAACTCG
CTGAAATGTCTCAAATATGTTTAGGAAAATGGGAAAATTCTACTGAGACT
GATTCAGATTCTCACATGATTTCATCCGAAGTGGGTCACCAATACATCCC
CATGACCCCATCTCATTCTGTACTCTCACATACAGGACCAGGGCGAACCA
GTCAGTGCAGTGTCGGCTAGAGGTTGGAGTTTCCTACAAACCCAAACATG
GTACCTTCCGCACTTGTCCTGGGCGCGTCTCGGGGAATCGGACGTCAGAT
CGCCCTGACCCTGGCAGGTGCCGGTTACCGGGTGGGCGTGGCTGCCAAAA
CCGTCCACGACACGCCGAAACTCCCAGGAACCATCTACACCGTTTCAGAC
GAGATAACGTCCCGAGGCGGACACGCCCTCCCCATCCCATGTAACGTGCG
GAACCCAGAAGAGATAGACAACGCAGTCAGCACATGTATCCAGGAGTTCG
GCGGCCTTGACTTTGCCGTGTACAACGCCGGTGCGATCTTGTGGGAGAAG
GTTATCGACACGCCCCTTAAACGGTTCGACTTGATGATGGACGTGAACGT
GAGAGGTGCTTACGTCATGATACAAGCCGTACTGCCGCACATGTTGGAGA
GGAAGTCGGGGAGGATACTGTTGGAGGCCCCGCCTATCTACTCCCGCTTT
TTCAACGGGAAGGCGCCCTACGCTGTGACCAAAGTTGGGATGACGGTACT
GGTGCAGGGGTTGGCGAGGGAGCTCGAAAATACAGGTTAAGTCAAATGGG
ACTTTTTTGAAGAAGAATGCATGTGTGATCACAACAACAACAATATGTCA
CTTGAGATTGATTATAACATAGCAGAATCAATTATGGAATCATTTTATGA
TAACCTAAGGCCGTATATCATGCTAAAGAAAGAAGTATAAGTTCTCGATC
TAGCTGTTTACAGTTGTCGTTTTGTAATGTTCCTCCTTTCACCAATCAGG
GGTCTCGATAACAGCACTGTGGCCTGCAACGACGATTGAAAGTCACGTGA
CCACGGTGAAGGGTGTTCCACCGGCCTTCTTCAGGAAGGCTGACATAGTT
GCCGACGCCTGCCTGGCTATTGCTCAGGAACCAACGGAAAGGTCTGTCTC
TAGTTTTCAAATTTAGACAAATGTGGATCGGGACGGGAAAATTGGGGACA
TCAGTGATCTTAGACTCTACCAGTCTCCCCCGGTCGCTGGGAAAATAGTA
GAAATTGGCCAAATAGAGTCAAATGTTTGAAGGGAGTTGGCTACGGAGAG
AGGGTCCAATTCGCACCCGAGTTGCGAATTGGACCCTCTCTCCGTAGCCA
ACTCCCTTCAAACATTTGACTCTATTTGGCCAATTTCTACTATTTTCCCA
GCGACCGGGGGAGACTGGTAGAGTCTAAGTAATCTGCTGTATATGTCTTT
TCATGCAACATTTTCATGCAACAATTTGCATCATCAAAGTTACTATTTTA
CAAGCAGAGATTAGCTACAGGCTCCGACTAGTTTGGGACGATTTTTATGG
CTTTCTATTTTGTCACGTTTTCTTTATGTCGCCAAGCCAGACGCATAGAA
AACGCCCAAAACTAGCCGGAGCATACTTAAGTTGGAGCGTTTGGCTTAGC
GACATAAAAAAACGACTTGACAAAAAAGAAAGCCCGACAAAAACGTCCAA
AACTAGCCGGAGCCTAACCTCTGCTCGGAGAGTACAAAGTTGCCTCTATA
TATATGAATTTACGTTTAGCACTCCGACTCGACCCCAAGCTTGCTACCCG
TTTCATCTAACCCAGCTCGTCATCACCAGGGATATGTGTAGAAAAATATT
TACTCTCTTTGTTGAAACTGCAGGTTAAACGGCAAGGCTCTAATTGACGA
AGATTACCTGCGGAGTTTGGGGGTGACTGACTTCTCTANTGGGGGTGACA
GACTTCTCTAAGTACCAGTGTCTGCCGGGGACCGAGCCGCCCCGCATCAT
GCCCCGACGGTTCCCTTCTCTCCGCGTGGAGGAGGAGGACCAGGTCACCA
TACCGGACTCCAAACTATAGTGCGTTAGTTATTCTCCAAGCAGATGAGAT
CCTGGATGTTGACATCTCCCTATTTCGTACATTCACCTGTCAATCGAAGA
TTATTAACGGATGCCCTTGGAGGCTGATTAGAAAGTGCAGACATTTCCAC
TATTCTCCAAGCAGAGGTTTCGGTCGGAGGGCTGGAGGTGGACGCGATAT
TTAACGTCTCCCACCCTTCAGCCAGATCGTGAAGGGAGGTAGGACAGATA
GGCGTTAAAACTCGCGGCCACTGCTAGTCCTCCGACCGAAAACTCTGCTT
GGAGAATGAATAGTGGAAGTGTCTGCACTTTCTAATCAGCCTCCAAGGGC
ATCCGTTAGTAATCTTTGATTGAAATGGAGGAAATTTGGAGGTGCCAACA
TCCTCGATCTCATCTGCTGACAGAATACATCAATCTTCAAGCTGCTAGTA
TATCTTTACGTGGAAGAGGTAGGGTTGTGTAAGCAAACAAGCTGTTAAAG
TATAGACAATCTCTTAATGGATACATGCTACAGCGGTCAACAGGCGTACG
TATACGATCTTCGCTCACGTGCACACCACACCACCCGTTCTCACTACCAT
CAACTCTTACTGTTGCCTTACGGAAAATGAAGCTCAACGTAAGAATACAC
TGGACGAAAAAATCACACGGTCATACAGTGTATTCATAATTGGTATTTGC
TTTAATCACGTAGTGTCCTCATGGAATTCAAAGTAGTGTCTTCAACAAGT
GGAAAGGGAATTTCGCAGCTTCCTAATCATTGTATCATTTGTTGCAGAAT
AATCCGCTACAACTGGATAACGCTAGCGTTACATGATAAGACATTTCAAA
CGGCATTAGCACAGGACATTTGTACAACACTGTAGACAACTGAAGAAGAA
TAGTGCAATGCCATTGGAAACGTGTTATATGGTCTGTCATTTATCCAGTT
GCAGTGGTCCATTCTGTAACACTTATCGTCTAGCTAGATGCCATAGCTTC
TTTGATATATCAATTGAATTACATCATTTCAAGCTGCCTAGGTTACTTAA
CTACTGAAGCTGCGCGATGCTACTACTGTGGTTTTTACTGTGGCTTCTGT
AAGTTCTGTTTGATTGAAGGATTCTGGATGATTTTAACATGATATTTGCT
CATCTTCAATGTTGTGTTTCTAACCATCGCAGATGTTGTTCATGATTTCC
CGAATTATTGCTAATCCACATGCGTAAAAGCAGTGACATTTCAAATAGTT
AAACTCTAGATTATAGTATTCCATAACATCCGTTCCATATGTGACAATAT
AACATTCCATATGTGACCGTCAAAAAAGGTGTAAAGACATCTGCAAATCT
TCAACTTGGAATTTCAACAAACTGAACAACATTACATGCCAAGAGAAATT
CCTGGGATTGTCGCGTTGTACACAAATGTAAAAATGTACATAATATACAC
AAATGTGACAGTATGGCTTCAAGACAAATGTGAATCATAATCAGGGGTGG
TAACTTGTACAAGAAATAAAAAAGTTATTGAACGCTTCATTGGAGTTGGA
TGAAAGTAGTTAAAATGTTGGAGATTGG Coding sequence (CDS) from alignment at Sc0000294:103846..108673+ >Blg02091.3 ID=Blg02091.3|Name=Blg02091.3|organism=Branchiostoma lanceolatum|type=CDS|length=768bp|location=Sequence derived from alignment at Sc0000294:103846..108673+ (Branchiostoma lanceolatum)
ATGGTACCTTCCGCACTTGTCCTGGGCGCGTCTCGGGGAATCGGACGTCA
GATCGCCCTGACCCTGGCAGGTGCCGGTTACCGGGTGGGCGTGGCTGCCA
AAACCGTCCACGACACGCCGAAACTCCCAGGAACCATCTACACCGTTTCA
GACGAGATAACGTCCCGAGGCGGACACGCCCTCCCCATCCCATGTAACGT
GCGGAACCCAGAAGAGATAGACAACGCAGTCAGCACATGTATCCAGGAGT
TCGGCGGCCTTGACTTTGCCGTGTACAACGCCGGTGCGATCTTGTGGGAG
AAGGTTATCGACACGCCCCTTAAACGGTTCGACTTGATGATGGACGTGAA
CGTGAGAGGTGCTTACGTCATGATACAAGCCGTACTGCCGCACATGTTGG
AGAGGAAGTCGGGGAGGATACTGTTGGAGGCCCCGCCTATCTACTCCCGC
TTTTTCAACGGGAAGGCGCCCTACGCTGTGACCAAAGTTGGGATGACGGT
ACTGGTGCAGGGGTTGGCGAGGGAGCTCGAAAATACAGGGGTCTCGATAA
CAGCACTGTGGCCTGCAACGACGATTGAAAGTCACGTGACCACGGTGAAG
GGTGTTCCACCGGCCTTCTTCAGGAAGGCTGACATAGTTGCCGACGCCTG
CCTGGCTATTGCTCAGGAACCAACGGAAAGGTTAAACGGCAAGGCTCTAA
TTGACGAAGATTACCTGCGGAGTTTGGGGGTGACTGACTTCTCTANTGGG
GGTGACAGACTTCTCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg02091.3-exon-Sc0000294-1570713199:103846..104021 | Blg02091.3-exon-Sc0000294-1570713199:103846..104021 | Branchiostoma lanceolatum | exon |
| Blg02091.3-exon-Sc0000294-1570713199:105231..105830 | Blg02091.3-exon-Sc0000294-1570713199:105231..105830 | Branchiostoma lanceolatum | exon |
| Blg02091.3-exon-Sc0000294-1570713199:106045..106186 | Blg02091.3-exon-Sc0000294-1570713199:106045..106186 | Branchiostoma lanceolatum | exon |
| Blg02091.3-exon-Sc0000294-1570713199:106919..108673 | Blg02091.3-exon-Sc0000294-1570713199:106919..108673 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000294 | genome | Sc0000294:103846..108673 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg02091 |
|
