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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000294:87215..95407- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg02087.3 ID=Blg02087.3|Name=Blg02087.3|organism=Branchiostoma lanceolatum|type=mRNA|length=8193bp|location=Sequence derived from alignment at Sc0000294:87215..95407- (Branchiostoma lanceolatum)
TTTCTATCCAAGATGGCGGCGGCACCAGACAGGAAAATAAACTCAGTTGA
CGATCATTGAAGACCATAAACCCCAGTTGCTGGCCACGCTTACCCCATAA
AATTCCGGTTTATAAGGTAAGAGGTGTTGCCCTCTCTTCGTGAAATAGGT
ATGGTCACGGATAACTTTCCTCAAGGAGGCCTAAACAACTTCACAAGTTC
AGGAGTTTTACAGTTTCACTGACTGACTGAGTGAGTGAGGATGTCTTTTA
AAAAACTTCTGGAGATATAGTTTCATCTTGTACAGTGGTATATGTTGCAA
GGCGTACACTGGTTATTCATTTGTGAGTACTGTGTTGACGTGCATGTAGC
TAAGGAGGCCTGTGACGTCCCGTTCACTACAGCTTAGTCTGGCTATGCTA
TGAGGTATGGTTTGGAGAATGCCCCTCCCACTTGTCACTGTTGGAAGTAG
TAAAATAGTGTTGTGAACATAACAGATGTTTATGATATGACATTGATGAT
TGTTTCAAGAACAAATTTGCTTATATCAATAGTTCAACAAAAATCAGCAG
CAGAAGGGCGTCGCTATGGCCAACCAACCACAGCCCGAGGCTGAGGACGA
CCTGCTGAAGTCGCTGGAGTCCAAGTTCTCTGCCATGTTTGACTACGCAC
AGTGGCAGAGAACCAGAGCTGCAGTGGCCAGCGCCAAGTCAACCAAGACA
AACAAAACTGCACAGAGTCAGGCTACCTCGTGTAAGTCAGGTATAAATGC
TAGGAGTGGGATCGATCTTTCTAAAAATAATCCATCATAGGGAGATCTGT
GTACAGATGTTCAATTCGAGGAGAGTATAGACTAGAGTAGAGTAGAGTAG
AGCAGAGCAGAGCAGCATAGAGTAGAGTAGTGTAGCGTAGCGCAGCATAG
AGTCGAGTTGAGTCTTTGACCAGTTGGTGATAACTGGCACATTCAGCATT
GAGCAATGATATAATATCATTTATTGTGTACATATTATGCCTGGAAAAGG
GTGGGATGTTTGCATGCATACCTAGTCAATTATGGGTTAGCTGGCATTTA
GCTCTTGGTTACAAAATGAGTTCACAAACCTGAAATTATATGCCTTGTTT
TCCTTGGATGATCCTTTGGTCTACTTAGTTAAATCACTTTTGACACTGTC
AACATAGTCTTTATTTAACTTCTCCATTTACAAAATGGAGGGGGAGACAA
TACAGATGATTACACACCTCTGCTAGTTGTCTCCCCCGCAACATACAAAA
TACATACGTAAATAAGAAGAAAAAATGTATAGCTAGTAACTATCAAAATA
CAAAAATATACTATGAATATACTAATATGAATACTATGACTATCATATAT
TCAAGTACAAAACAGCATAATGACAGCTTTGATTGGATTGTATGTGACCT
TGCAGCCCGAGTGACACCAGATGAGACCTTGGACACGCGGACAGTTGGCA
CGGCCTGCTCCTCCACATGCAAACACTCCTGGAACAGGAAGGACATGTAC
AACATACTGGATGAGAAGGCAGCAAAGGAAGCCAGGAAGAAGGAGATAGA
AGACAATATCATGAAGGTAAGAGATTAAAGCAGTTACACTACACATGTAT
GTGTCATTAGATAACCCTTACGAAATAATGCTGGTCAGATCAAGTGCAAA
TTTGAAAGAAAGAATATTAATTAGGACTTAAGAAAATGTTACACGTGTCC
ATGTAAAACGTTGTTGTACAATGGGGAGAAGCTGACCTTTTATTTATCTA
CATCATTGAAAAACCATCCTGACGTATCTACCAGAATGAGTCACATTTGC
TTATCATGATGTTATACAGGAATTGGAGTCTAAACAATAAATCATAGTGT
GTATTGTATTGTCTGTTACAAGAATATCTTCAGAGTTAGACAATCTCACA
CAGCCTATTAGAGTGAGACAAACCACCTGTGGGATTTATGTCAAGGAGTA
GTTTATGTTAATTAAAACTCATACTGTTATATACGTAGATATAAAATGTA
CTGACAGCAAACTTAAGATGACTTGCTTGCCTATTGCATGCTGCTTAAGT
CTCGCATTAAGGAACTGCTAGAATACTCGGCTAGGAAAAGAGCTGACAGG
CTCTTCCAAGGGCTTGATTCTAGCGAGGTTGATGACATAGAGATGTGTAG
AATCAGGACATTACAAGTAAGTATAGGGTGTCACTGTGGTATGGTAACAG
GTGTTGTGGTAATATGTGTATTGTACTTCTAGAATGGAACCTTGGTGAGC
ACCATAGCATTAACCCAGAGACTTCTATCAGCTTAAAGTTGGGTGTATCT
GATCACTTGTGAATTGTGATTCATTTCAGTGTTCTCACCAGGATTTTTTC
ACAGCATAGGGGTCAGGTACAGAAGGCCAACTTAACGCGGTGCAAGTCAC
GCGTGGAGTGACCAGAGTAGGGAGTCCGGCATGTTCTCCCGGAAAATTTG
TGAATTCATAACCCAATAAGACATTATTTCATGCATTTTGAGGGATAAAT
TTTGTGAAGTAGACTTTTTCCTCTGTCACAGCCTCATTCTAAAGCCAAAT
ATGAACTTTTTATAAGATTTATGAAGGGTCACAAGGTTTGTCCCAGAAAG
AAACACCCCTATGCTGGTTGAAACACAGCATAGGGGTCCAGATCACAGCA
TAGGGGGTCCAAATCACAGCATAGGGGGCCCCTATGCTGAAAAGGCCTGG
CGAGAACACTGCATTTGTGGTAGCTCAAGTTACCATCTCAAGTCCCTTCA
GTGCCATTTGACACAAGACACCTCTGTAATCATGGTAGAAATAAGTGTCA
TACAGACTGTATCACTTTTGTGTTTGCACATTGATACTGTTAAGTTGAAA
CACATGAAAATGTGCTTATTTTTTCACTGTTATTCCTTACAGATGAGAAT
AAAAGCAAGAATGCAAACCATGGATGAGTACACAAAGAGATACGAGTATT
TGTATCCTTTTGGTTCAAGACCTGTCAAATATAGCATTGGTGTAATTACT
ATCACAAAAGTCAAGCATCAGTTGATTGGAATGTGCCCAGTACACTCCCT
TTTGAGCCCCAATGTTTCAGATGTNTTGAGCCCCAATGTTTCTGATGTGT
GCATTTTGCTCAGCAAATCTATTACTTTTTCCTTGACTGACTTCTTGTTC
ATCAGATTGTCAGAAAATAAAAAGTTGCAAGCAGAAATTCAGGGAACAGA
GAAGCAGACTGTAAGTACATATGGTTTACAGTTGTTTGAAACTTCAATGT
ATTGGTGACTGTTGGGGAGTACTCAGTGATATAAAACAATGTTTGCAACT
ATTCCATTTTCCAAGTTGATAGATGATTGATTTGTACGAGGTATGCTAGC
TCCGATTATTTAAACTCATAATTCTGCTACAATGATGTTCCCCTTGATAA
GGCCCACTTCTTTTCTAAAGATTTGAGAAATGAATTGTTAATATGTCTAG
TATAAATTGATAATTAAACTCTTTCACTTCATTTTGTTCTCACAGCATAG
AGATACAACAAAACTCCTAAGAAAATATGAGAAATGCCGGGTAAGTATGT
CTACTTGTCTGTTTCATATTCCTTATTGTGCATGTAGACAGTGACTGCAT
TGGAACTTTGTAGGTATGTGTAGCTATTTCTTATAAGTTATACATGTATT
GAAGGATGAAGTTCTGACTTTGATCTCTAGGGGGCAGTATCTACAATAAA
TAGCAAGTTTCATGAGGACCTGGAGTCAGCCCAAGCAGATCTCGAGGAGA
CAACAGAGAGGCTAAACAGGGATCTTGAAAGTAAGAAATGACATTTATAG
TCGTCTTACCTGAGTTATCATTGGTTTGGTTTCTTCTCATTATATATTGG
AAGTGTCAGCTTCATTTGGAAGTAAGCCAATTTGGGTAATGCAATAACTC
CAAAGATAGTAATGATGCTCCAATCCAACAATGTTGCAGATTTGTTTATT
GACCATAGCCAACTTTCACCTACACCCTTGTAATATCGATTTGCAGACAA
TACTTCATACTTTCAGTTGCACCACCTATCAGGACTGTTAGAAACTGCAG
TTTGTTGCTTTACAAAATGTCTTACTCCCATGTGTTCTCTTTAACAAACC
CCCTGCAGATCTTCATGGAGACCTGAGGGCAGTGGAACACAGACTAAGAT
TGAAACAGGAAGAACTCCATGTGCTGGTCACATACAAGGACAAGGAATAC
CCATCCAAGGCACTTAAAATATCAGGACTGGAGACGGAAATTAAAGATCT
GGCTGCAGAGCAAGAGGTTTGCAACTTTTCTTTTAAATCTGCAGAAGCAC
AGTTACCTTAGTTCATGTACACAAAAGGTTTATTTAGCTCTAAGAAAATG
ATGATGCAACACTGCATGATAGACCTCAAGTACGGCTGTGACATGCCTTA
ATACCATTGAAAGCTCAACAACATTTTCGTGTACAGCTGTTCTTTCTTTA
TGATGGACNATGAAGTTCTGACTTTGATCTCTAGGGGGCAGTATCTACAA
TAAATAGCAAGTTTCATGAGGACCTGGAGTCAGCCCAAGCAGATCTCGAG
GAGACAACAGAGAGGCTAAACAGGGATCTTGAAAGTAAGAAATGACATTT
ATAGTCGTCTTACCTGAGTTATCATTGGTTTGGTTTCTTCTCATTATATA
TTGGAAGTGTCAGCTTCATTTGGAAGTAAGCCAATTTGGGTAATGCAATA
ACTCCAAAGATAGTAATGATGCTCCAATCCAACAATGTTGCAGATTTGTT
TATTGACCATAGCCAACTTTCACCTACACCCTTGTAATATCGATTTGCAG
ACAATACTTCATACTTTCAGTTGCACCACCTATCAGGACTGTTAGAAACT
GCAGTTTGTTGCTTTACAAAATGTCTTACTCCCATGTGTTCTGTTTAACA
AACCCCCTGCAGATCTTCATGGAGACCTGAGGGCAGTGGAACACAGACTA
AGATTGAAACAGGAAGAACTCCATGTGCTGGTCACATACAAGGACAAGGA
ATACCCATCCAAGGCACTTAAAATATCAGGACTGGAGACGGAAATTAAAG
ATCTGGCTGCAGAGCAAGAGGTTTGCAACTTTTCTTTTAAATCTGCAGAA
GCACAGTTACCTTAGTTCATGTACACAAAAGGTTTATTTAGCTCTAAGAA
AATGATGATGCAACACTGCATGATAGACCTCAAGTATGGCTGTGACATGC
CTTAATACCATTGAAAGCTCAACAACATTTTCGTGTACAGCTGTTCTTTC
TTTACGATGGACAGAAATAAAACTGCATATTCCTCCCACAGGAGGAGCTG
TCTGAGTTGAACAGAATCATCCACATTGAGAGAACAAGTTTTGAGAGACA
GAAGGTTGCAGATAACCAGGCCATGACTTCCAATGTTACAGAAGTAAGTA
GTACATTCTTGTGCTATGGCTACAAGTTAATGTTTAAAGGCATCAGGGCT
GCAAAGGTGTTGTGGTGATGGCATCCTTTTCTATTGGATATTTGGCATGT
TCTTCCTGCAAATTTGGTCAAGTACATACATACAGATTTGATACGAAGCA
TTACAATTTCTGTATTTTAATTCCTCCTTTCACCATGCTTTGGAAAATTG
CTATAATGATGTACTTAGTATATCTATTTATCACATGTGTACATGGCATA
CTCCTGCAGGCACTAGCAGTATTAAGGGGTGCAAAATAGACTGACCCTTT
CCCATTTCCCCACAACAGCTGATACACCAGGCCCTTTCTGACAACCCTGG
TAGTGATTCTCAGGTAGTGTTGTATGGTCCCCATGTATCAATGGTGGAGG
CACAGAACTTACAATATTGTACTTTACTACTAACACTGTGGTGATCATGC
CAGCAGTTCATTCAGGAGTCTGGCACAGTTATTGATTATATATGTTCTTG
CTAACCTTTCCTTCACAAAGGATTACAGGGGTTTAACAGGTTGTAACACT
AAATAATGCATCTGGTGTCTAACATGCATGTCAGACCAAAGGTTCAACGG
TTATGTATTGAAACAAAGACTGCATTTCTTGCAAGTCATCTACATTTGTA
TTCATTTTAGCTTCACAGGTAAACTTTATGAGACTTCAGAACAAAAGCTT
TTTGTATCAACAACAGGAAAAAGACCCTCCGAGTACATTTCCTTCTGAAA
ACTGATATGCCTCAGGTGGAAACCCACACATTGCCAGTTTTGCTAGTGCC
ACACTTACTGTCTTTTTTCTTTGGTTAGAAATCCATATCATCCATGCACG
GCAGCCTGAAGGACATGGCCTTACAGAATGCTGTGATGAAGAAAGAGATT
GAGGTGCATCGTGGGGAGAGGGAAACCCTGAAGCAGGACATCTCACTACT
GGAGGCTGAACTCAAACAACTCATCAAGGATCCCAAGTCACAAGTCCTTC
AGCAGATATTCCCTCACTTCTTCCCGAAGGAACCAAAGTGAGCTCATTTG
CATTAAGATATATCTTAAAATGTTGGTTCATGTAGCTGAATACTCTCTTT
ATACCAGTAAAGTTACTCAGTTATCTTTTTGTTACTGGGACATGCTCACA
AAATATAATGTCTTTAATCAATATATCTTTTGTTCATATTTCTGCAGATG
TACCCCAGACATGGATGTAGTGCTGGACATCCCCACACAGGAGTGCCTAC
CTATCTAACAGTGCTGGTGACAGCAGTTTTAAATAGTATAAAAGTGTGGA
TGGCAATGTGAAAATGTAAACCTGGTCTGCTAAATATATTGAAATTAAAA
TTATATAATGGATATCTGTACAACAAATGATATTATCACATACATTATGA
TTGAATATGGAACATATCACTAGATATTACTGGTACTAAATAGTCAAGCT
GCTATATTTTTTTGTTTGAATTCTAAAGAAGTGCAGTCCAAAATTATGAT
AATGCATTATGACTGATTCTTTTAATGAAAATGTATTTTATGAGATTTTA
TGAGCAGAATTTTTTAATTTCTGTTATATGTGTAAGCCTGAGTGTCATCC
TAGTTAGTTTACTGGGGCTCACATACTCTCCCCTTACCAACATATCATGC
AAGTATATATGCTGAAAGCAATAAATTCATGTGTTCACAGAAATATGCCT
TTTCATCATTACATACTATAGTACTGCTGATATTCACTGAACCCTTTTTC
ATATGGAACAATCACGTGACAGTTAAAGTAGCTTCATATTAAATTTTTGT
TGGTTACTGGGCTAGACAACAGGGAGAGGGTTTCCAAGCTTTTATACTAA
ACCACCTAAAACTTGTACAGCCTAAAATTGTAACTTGCAGTGACTTGTTT
CTTGAAGGTATAAAATGGAAGAACTGATCCTACATGTTAAGCATACCTGG
TGGTCCCAAGTTGCTTTCAATCCTAAAGACATTCTGGGGGTATACAGCAG
TAAAAACCTACGTACAACACTCAAACAATAGAGACAACAAGGAGGGGAGA
AATAGAAGTTTATTGGAACTCATATTTGTGCCTATAATCACAATCATAAG
AATATTGTACATGGTAAGACAGGAATACACCCCAAGTGATAAGTCTGCCC
ACTTACACCATCNTACACCCCAAGTGATAAGTCTGCCCACTAACACCATC
TGAGTGAACAGTGATGCTGTCAGGAACAGTTATCGGCAACCAACAGCAGC
AACCAAAAGGGCTTCAAGATGATAAACACACTGTAAGCATTCCAATCCAA
ACAATCTGGGAGACAAGTAGCCTGCAAAGCAACCACTGTCATGATCCTGG
CTTCTGTTTTATGTCCCTATTTCCCTAATACACTGTTTTCTGTCAATAGA
AGGTATGATTTTCAGACATAAGGCTCTATGGGATTGATGTACACCAGAGG
TGGGGCTAGACTGTGTTATGGATGGTTCATTTCCACTTGTTGTTCTCGTA
GTCCCACTTGGATGCTAGGCCTTCTACAGGGTTGTTGCGCATCTGTAGCT
GTTTCTTCATCATGGCCTCCTGCCACTCATAGTTACACGTTTCAGGCATC
GCAGGCATGGCTGTGGAGAACAACAGGTGATAAGTATCATACCACACAGA
GAATATGGACAAAGTTCATAAATATCCAGTAAACTGTGGCAATGACAAGC
TCTTCTGTTTAATGATTGACATTTTACCAATACCTTATAAATGCTTAAAC
ATTCTCCATGCTGCCTTAATCTGTAACCAATAGGGAATTGGGT Coding sequence (CDS) from alignment at Sc0000294:87215..95407- >Blg02087.3 ID=Blg02087.3|Name=Blg02087.3|organism=Branchiostoma lanceolatum|type=CDS|length=1161bp|location=Sequence derived from alignment at Sc0000294:87215..95407- (Branchiostoma lanceolatum)
ATGGCCAACCAACCACAGCCCGAGGCTGAGGACGACCTGCTGAAGTCGCT
GGAGTCCAAGTTCTCTGCCATGTTTGACTACGCACAGTGGCAGAGAACCA
GAGCTGCAGTGGCCAGCGCCAAGTCAACCAAGACAAACAAAACTGCACAG
AGTCAGGCTACCTCGTCCCGAGTGACACCAGATGAGACCTTGGACACGCG
GACAGTTGGCACGGCCTGCTCCTCCACATGCAAACACTCCTGGAACAGGA
AGGACATGTACAACATACTGGATGAGAAGGCAGCAAAGGAAGCCAGGAAG
AAGGAGATAGAAGACAATATCATGAAGATGAGAATAAAAGCAAGAATGCA
AACCATGGATGAGTACACAAAGAGATACGAGTATTTATTGTCAGAAAATA
AAAAGTTGCAAGCAGAAATTCAGGGAACAGAGAAGCAGACTCATAGAGAT
ACAACAAAACTCCTAAGAAAATATGAGAAATGCCGGGGGGCAGTATCTAC
AATAAATAGCAAGTTTCATGAGGACCTGGAGTCAGCCCAAGCAGATCTCG
AGGAGACAACAGAGAGGCTAAACAGGGATCTTGAAAATCTTCATGGAGAC
CTGAGGGCAGTGGAACACAGACTAAGATTGAAACAGGAAGAACTCCATGT
GCTGGTCACATACAAGGACAAGGAATACCCATCCAAGGCACTTAAAATAT
CAGGACTGGAGACGGAAATTAAAGATCTGGCTGCAGAGCAAGAGGAGGAG
CTGTCTGAGTTGAACAGAATCATCCACATTGAGAGAACAAGTTTTGAGAG
ACAGAAGGTTGCAGATAACCAGGCCATGACTTCCAATGTTACAGAACTGA
TACACCAGGCCCTTTCTGACAACCCTGGTAGTGATTCTCAGAAATCCATA
TCATCCATGCACGGCAGCCTGAAGGACATGGCCTTACAGAATGCTGTGAT
GAAGAAAGAGATTGAGGTGCATCGTGGGGAGAGGGAAACCCTGAAGCAGG
ACATCTCACTACTGGAGGCTGAACTCAAACAACTCATCAAGGATCCCAAG
TCACAAGTCCTTCAGCAGATATTCCCTCACTTCTTCCCGAAGGAACCAAA
ATGTACCCCAGACATGGATGTAGTGCTGGACATCCCCACACAGGAGTGCC
TACCTATCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg02087.3-exon-Sc0000294-1570713199:95292..95407 | Blg02087.3-exon-Sc0000294-1570713199:95292..95407 | Branchiostoma lanceolatum | exon |
| Blg02087.3-exon-Sc0000294-1570713199:94677..94860 | Blg02087.3-exon-Sc0000294-1570713199:94677..94860 | Branchiostoma lanceolatum | exon |
| Blg02087.3-exon-Sc0000294-1570713199:93842..94002 | Blg02087.3-exon-Sc0000294-1570713199:93842..94002 | Branchiostoma lanceolatum | exon |
| Blg02087.3-exon-Sc0000294-1570713199:92457..92515 | Blg02087.3-exon-Sc0000294-1570713199:92457..92515 | Branchiostoma lanceolatum | exon |
| Blg02087.3-exon-Sc0000294-1570713199:92198..92252 | Blg02087.3-exon-Sc0000294-1570713199:92198..92252 | Branchiostoma lanceolatum | exon |
| Blg02087.3-exon-Sc0000294-1570713199:91868..91912 | Blg02087.3-exon-Sc0000294-1570713199:91868..91912 | Branchiostoma lanceolatum | exon |
| Blg02087.3-exon-Sc0000294-1570713199:90824..90923 | Blg02087.3-exon-Sc0000294-1570713199:90824..90923 | Branchiostoma lanceolatum | exon |
| Blg02087.3-exon-Sc0000294-1570713199:90338..90495 | Blg02087.3-exon-Sc0000294-1570713199:90338..90495 | Branchiostoma lanceolatum | exon |
| Blg02087.3-exon-Sc0000294-1570713199:90015..90116 | Blg02087.3-exon-Sc0000294-1570713199:90015..90116 | Branchiostoma lanceolatum | exon |
| Blg02087.3-exon-Sc0000294-1570713199:89645..89689 | Blg02087.3-exon-Sc0000294-1570713199:89645..89689 | Branchiostoma lanceolatum | exon |
| Blg02087.3-exon-Sc0000294-1570713199:88971..89179 | Blg02087.3-exon-Sc0000294-1570713199:88971..89179 | Branchiostoma lanceolatum | exon |
| Blg02087.3-exon-Sc0000294-1570713199:87873..88810 | Blg02087.3-exon-Sc0000294-1570713199:87873..88810 | Branchiostoma lanceolatum | exon |
| Blg02087.3-exon-Sc0000294-1570713199:87215..87833 | Blg02087.3-exon-Sc0000294-1570713199:87215..87833 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000294 | genome | Sc0000294:87215..95407 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg02087 |
|
