Blg02039.0 (mRNA) - B. lanceolatum

Overview
NameBlg02039.0
Unique NameBlg02039.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000252:6260..8045+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg02039.0 ID=Blg02039.0|Name=Blg02039.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1786bp|location=Sequence derived from alignment at Sc0000252:6260..8045+ (Branchiostoma lanceolatum)
ATGCTGTACCATTGTTTGTGTGCACCAGAATATAAGGTTGTATATACCGC CAAACACATGCTGTCTCTGTGGTTGATTAAGTGTGAACTAGCTAAGACAA GCTGGAAGTCAGAAAGCCATTTGCCCGGCAAAACTGCATGGCAAAGCCGG GTTTCTGACGTGAAGCGAGAACGAACCATTTCCCACGTAGTCCCAGACAG TTGCCATAGTTACTAAGCTATCTGTCTGACACCCCTGCGGGTGGTCTCTG TACNATCTGTCTAACACTCCTGCGGGTGGTCTCCGTACACGAGGCATTTA CTCATTCTAGCGCCAGACCCTGAGCAGGCCGCACACACTTGCTCTAAGTC CAATCCCGCGAACAAAACGCTTGACAACCCACCCGCCCACTCCGTTAAAT CGCCTAGGCAATTATACAGTTACGAAATCGTTTTTTCTTACTGTACATAC CTTTCTGGCCACGAGTTTGGCTTTTATAATGCAGTTTCTTTAGCTGCCGT CCGCTATATCAAACAGACACACAGCTACGTTGCCCTCTGTTTCCGTATTG TACATATTTTCCTGACCACTTGTTTGGCTGGTTGTGGTACAACTGCAGTG ACGTATTTTGTATATTTTCCTGACCACACGTTTGGCTGGTTGTGGCCGGT TCTTCATGCACCACCATACAATTGTGGTGACATAGTTCCCGCATTGTCTA TATATATATTTTCCTGACCACACGTTTGGCTGGTTGTGGCCAGTTCCTTA ATGCGCCGTCTGTTAAACCCCACAGACGCTCATACAATTGCGGTGACATA GTTCCCGCATTGTATATATATATTTTCCTGACCACACGTTTGGCTTGTTG TGGCCAGTTTCTTTATGCGCCGTCTGTTAAACCCCACAGACACTCATACA GTGGTGGTGACATAGTTCCCGCATTGTATATATTTTCCTGACCACACGTT CGGCTGGTTGTGGCCAGTGTCTTAATGCGCCGTCTGTTAAATACCACAGG CACCTATTAAGTCGCGGTGACATTGTTACCGTATTGTACATATTTTCCAG AACAATTGTTTGACTGATAGTGGCCGGCTTGTCCATGTGCCGCCTGTTGA AACGCACGGACACTTACACATTTACTGTAACGTTTCTGCTTCCGGTAATG TAAAGTGAGCCAGCTTTTACCAGCTACCGTCAGTTATAACACCTTTTATA AATACACCCTTGGACAATACACATTCTCTCCTTGCCACTCCACGCAGATG CCTCTGTCGCTGGCGACCGTGAATTCACACCATATGACGCCAAACAGACA TGTCATTTATCTATGCCGCCGTGCATGCCTCTCTAACACGTCTAGGTTTT GTTTGTTTGAGTCCCAGCATTGCCCGTTACACGTTCCGGCGCCCTGCGGG GCCGGAATCGTGATGACCCGACCGGCCGGGGACGAGGAGGACCAAATGAC CAAAGACGGGGAGGTGGCACCAGGGGACGCGGGTCCCGCGGCGGAGGCCG AGGGTCCCGCGGTAGAGGCAGAGGGCGAGGTGGAGCGACAGACCCTGACC CAGACCCACCCAACATTGGCAACAACGCGCAGCTGACTCCAGACCAAGTC GCCGACATCCAAAGTCAGCTGCAGCGACTCCAGACCGTGACGGCTCATCT CACCAGTCAACTCGCGGCCAGAGAGAACCCCACGCCGGGCAGACAGGACA CCACCGTGCCGCCAACCCAACACGACTTCTCGCCGCCTGCACTCCCACCC GCCCGGCTCGACCAACCCGGCGACCCCCTGGCATGA

Coding sequence (CDS) from alignment at Sc0000252:6260..8045+

>Blg02039.0 ID=Blg02039.0|Name=Blg02039.0|organism=Branchiostoma lanceolatum|type=CDS|length=432bp|location=Sequence derived from alignment at Sc0000252:6260..8045+ (Branchiostoma lanceolatum)
ATGCTGTACCATTCATTGCCCGTTACACGTTCCGGCGCCCTGCGGGGCCG
GAATCGTGATGACCCGACCGGCCGGGGACGAGGAGGACCAAATGACCAAA
GACGGGGAGGTGGCACCAGGGGACGCGGGTCCCGCGGCGGAGGCCGAGGG
TCCCGCGGTAGAGGCAGAGGGCGAGGTGGAGCGACAGACCCTGACCCAGA
CCCACCCAACATTGGCAACAACGCGCAGCTGACTCCAGACCAAGTCGCCG
ACATCCAAAGTCAGCTGCAGCGACTCCAGACCGTGACGGCTCATCTCACC
AGTCAACTCGCGGCCAGAGAGAACCCCACGCCGGGCAGACAGGACACCAC
CGTGCCGCCAACCCAACACGACTTCTCGCCGCCTGCACTCCCACCCGCCC
GGCTCGACCAACCCGGCGACCCCCTGGCATGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg02039.0-exon-Sc0000252-1570713199:6260..6272Blg02039.0-exon-Sc0000252-1570713199:6260..6272Branchiostoma lanceolatumexon
Blg02039.0-exon-Sc0000252-1570713199:7627..8045Blg02039.0-exon-Sc0000252-1570713199:7627..8045Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg02039.0Blg02039.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000252genomeSc0000252:6260..8045 +
Properties
Property NameValue
GeneIDBlg02039