Blg02015.5 (mRNA) - B. lanceolatum

Overview
NameBlg02015.5
Unique NameBlg02015.5
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000136:443741..446870-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg02015.5 ID=Blg02015.5|Name=Blg02015.5|organism=Branchiostoma lanceolatum|type=mRNA|length=3130bp|location=Sequence derived from alignment at Sc0000136:443741..446870- (Branchiostoma lanceolatum)
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGCGTTAGATAGATTG TCATCTTGCTCCGACTATCTGTATTTTCAATACAACACTCACTGCGCAAA GCGAACATCATTCCTAAGACAATAGTGGCGGCAGTGGTTTGGCGTTTGTA CATGAAAGTGATAAAGAAATCGGGAATTGGGCAACTTCTCTCCGAACAGC CTTCAGAGTGTTCTAAACTGGTGTTCATGTGTCAATCATCTAGTTTTGTT TTCCAGCCGGATGCGGATGATTTTGACCAGAAGGTGCTGCCGTTGATGCT GGAGCTGGAGGAGATGGGCTTTATCAGCGGCATGCGCCACATCTGCCGCC GGCAATACCAGCTCAAGTTTGTTGTTGTTCACTTTGCAGTGCCTAGTGCA CATATTTCAGCAAGTTTCCTTGCTGTTCCTATAGCAGGGTACATTTTTAC ACGGAGGGGTTGCTAGCCCCTCCTCTTTACCGTTCCTGAGACCCAAATTT ATAGTATCTATTCTAGCATCACTTAATCACAGAGAGAAAAAAAATCAATG ATAACCTTGTAACAATGGAAATCATGATCTAGATCAGCAGAAAGAGCTTG CCAATGGATAAGATGACATCCGTATCTATATACGCAAATGAATCGTGTGC TTTTGTTGTATTTTTCTTGTCAGTTGTAACTGGAAACTGATCGTGGATAA CGCTTCGGACGGCGGGTATCATTTGGAGTACGTCCACCGCGATCTGTCGT CCAATCTAGACCTCAGTACCTTCAGGACAGAGGTGGGGGACCTCTACAAC ATGCAGGTTAGCCGATTCCCGTTTCCTTCCTGTTTTCTCCCATCTCCATT GATGACGGATAAGATAGCTACTGGCAAAGTAGCAGACGCCCTATAGCGTT CGATTGCATTATGTAGCAAGTGGCAGGACAGATGGGGGGGGGCACCATAT ACAGTATATGAATGTGTTGGAGTAAGAATAAAAATGTAGTTTGTTAGGCT CGACCATGTGAAGGCAAACATTATGTATTCCCTTGCAAATGTTACCAGTA CCTTTGTGTATCTGATATGCATACAGGTGTGCATCGGCAAAGCAGACGGC GAGAATACTCCAAAGCGTCAGCGCGTTGGGACAAAGGCGGTGTACTCCTG CATCTACCCGAACCTACTGGTCAACAGGTACGGTCCGTGGCTGGACATCA ACATCGTGCTGCCCCTGGGCCCTGACCGGTCTCTGATGATCTATGACTTC TACCTGAAGGAGAGTTTTGCGGGCGCGATGAGCGAGATAGAGGTACAATA GATTTGATGATGGGGATAGACAAGGGGAGGGGATCATTTTGAAGTTCGAN AGACAAGGGGAGGGGATCATTTTGAATTTCGAATAGGCCACGTGGAACTT TGTGGTATATTCATGACAACATCCATATCTTATCTAGGTTGTACTTTTCA ACTCTGAAGCTAGACGTATCACGTGGAACCTATTCCATGAGGTTATTGAA GAAGGTGATCGACGACGTGGAGCCAAGCCGCAGTTGAAACTTTATATATA TTTAGGAGAACATTTTTTTAAACTCACATTCAAGGTTGAATGTGAGTTTA AAAAATGTTCTCCTAAATATACATAAAGTTTAAATTTGAAACTTTATGTA TATCTATGAGAACATATCTTCTCAACTCATGATCCTGTTTATGAATTGCA ACATCATTTTGATTTCAGTTGGCGAACTTTATCGAGCAGAGCCTTGCGGA CAGTGACCAGGTCCAGCGGGAGGACACGAGGGTGTGTGAGGGTGTGCAGA GGGGCATGGAGTCCACTGCGTTCGACGTGGGGCGTTACGCGCCTGGCCCG GAAATGCCCGTGCACGCCTTCCACCTCCAGCTGGCGCGGGATCTGAGGGC AGGACTGGAGTCCAAGCACAGTACCAACTGAAGAGATTGTCTTTACATTA AAGGCAACACCCGTTTATAACGTTCTCTACCAATGTCGTAATATTGATCT ATGCAATCTGATTAGAATTTTAAGGTGAATACAAACTTATGGCAGAAACA ATATATGAAACTATGTATAATTCCCATTTGTATTGCATATTACTCCTTTG AGACATTTACATGTTACATCTTCGATCCAGATGTGTAGATACAGTCTGGG AGAGGCTTATCTGTTAGAATTATGAGAAAGTACGTCGCTTTGCTCCATAC ATATGCGTCTTTTTATTGAGTGAGTGATAGGGTCTAGGTTATATCATACT GGTAGTACACATGTAGATTGAAAATAAAAAGTTTGCTATGATTCAATTGG GAATTTGTAAGTAACCCTTTATCTGTCTGTAAGGTTAGTCAATTATTATA CATAATCATACTACTGTGTGTATGTTGGTAAAGAAATATTAATAGTGTTA AATCTTGGCAAACGACTATCAATAGTTAGCCATGGCAACGGCACGGCTAC ATGTTGGTCTGCGGGCGCTCCTTGAGCCACCTAGCGATCCCCTGCTGGTA CTGCACGTTGTCCATGACCTTGCTGAGGTTGGGGAAGCGGTCCAGCACGG TGGGGTCAAGGGGCGTCACCCAGCCCAGCGTGTTGAAGAACGCAATGTCG GCCCAAGTCAGCTGCAGGAAATATTGAAATGACAGTTATAAAAGTAGAAG ACATTGTTCCAGGGGCGCAAAAGGATTCATACGAGTTTTACGGAATACAT ACGACCGACTTCTGAGAAACATACGAATTTTATAGAATTCATGTAATATT CTGCTAAGAAACATACGAATTTTACCGAAAACAGACAAGTTTTACCAATA GTAAGGATCGTAATTATTCTGTAAAACTCGTCTGTTTCTTTGCAGTAGAT GTTATGAATTCCGTAAAATTCGTACGTATTCCATAAAACTCTTATGAGGT TCGTTGGATTCGTATGCATAGTTAGGCACCCCTGTATTCACTATTATTTC ATATTATCTTTAGTTACATGTGTGTACATTTTTATCCGGGTTCTCATGCG GGTTCTACTGGTGTACCTATGACGTATCTTTTGACGGCGAACGAGAGAAT GATAAAGTATCGCTTCAATCATTCATATATATTACATTGTATTAGGTGCG GTTGGTCGACATAAAAATTGCTTTATTATT

Coding sequence (CDS) from alignment at Sc0000136:443741..446870-

>Blg02015.5 ID=Blg02015.5|Name=Blg02015.5|organism=Branchiostoma lanceolatum|type=CDS|length=777bp|location=Sequence derived from alignment at Sc0000136:443741..446870- (Branchiostoma lanceolatum)
ATGAAAGTGATAAAGAAATCGGGAATTGGGCAACTTCTCTCCGAACAGCC
TTCAGAGTGTTCTAAACTGGTGTTCATGTGTCAATCATCTAGTTTTGTTT
TCCAGCCGGATGCGGATGATTTTGACCAGAAGGTGCTGCCGTTGATGCTG
GAGCTGGAGGAGATGGGCTTTATCAGCGGCATGCGCCACATCTGCCGCCG
GCAATACCAGCTCAATTGTAACTGGAAACTGATCGTGGATAACGCTTCGG
ACGGCGGGTATCATTTGGAGTACGTCCACCGCGATCTGTCGTCCAATCTA
GACCTCAGTACCTTCAGGACAGAGGTGGGGGACCTCTACAACATGCAGGT
GTGCATCGGCAAAGCAGACGGCGAGAATACTCCAAAGCGTCAGCGCGTTG
GGACAAAGGCGGTGTACTCCTGCATCTACCCGAACCTACTGGTCAACAGG
TACGGTCCGTGGCTGGACATCAACATCGTGCTGCCCCTGGGCCCTGACCG
GTCTCTGATGATCTATGACTTCTACCTGAAGGAGAGTTTTGCGGGCGCGA
TGAGCGAGATAGAGTTGGCGAACTTTATCGAGCAGAGCCTTGCGGACAGT
GACCAGGTCCAGCGGGAGGACACGAGGGTGTGTGAGGGTGTGCAGAGGGG
CATGGAGTCCACTGCGTTCGACGTGGGGCGTTACGCGCCTGGCCCGGAAA
TGCCCGTGCACGCCTTCCACCTCCAGCTGGCGCGGGATCTGAGGGCAGGA
CTGGAGTCCAAGCACAGTACCAACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg02015.5Blg02015.5-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg02015.5-exon-Sc0000136-1570713199:446505..446870Blg02015.5-exon-Sc0000136-1570713199:446505..446870Branchiostoma lanceolatumexon
Blg02015.5-exon-Sc0000136-1570713199:446065..446197Blg02015.5-exon-Sc0000136-1570713199:446065..446197Branchiostoma lanceolatumexon
Blg02015.5-exon-Sc0000136-1570713199:445579..445794Blg02015.5-exon-Sc0000136-1570713199:445579..445794Branchiostoma lanceolatumexon
Blg02015.5-exon-Sc0000136-1570713199:443741..445152Blg02015.5-exon-Sc0000136-1570713199:443741..445152Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000136genomeSc0000136:443741..446870 -
Properties
Property NameValue
GeneIDBlg02015