|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000136:529015..533022+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg02007.5 ID=Blg02007.5|Name=Blg02007.5|organism=Branchiostoma lanceolatum|type=mRNA|length=4008bp|location=Sequence derived from alignment at Sc0000136:529015..533022+ (Branchiostoma lanceolatum)
TTTTAATACTAAGCTTAGCATTTTGTTTTATATCATCGGAAAGCTTAATG
AATATTTTCCTATTTCGCAGGGACATTTCAGCTCTCAGGTATATACAACT
TCTTACAATCTCTTAGGTCCCTTCGGTTGCTCCTTAAAGATGTTTGATCG
TCATGGCAACCTTAAGGTGACACTTGGCACGCCGGGTGAGAGAGGATCTA
ACCTTGACCCGTTACAGTTTGACCAAGTTTCGGACGTGGCGTTCAGCTCT
ACGGGAGACATGTTCGTAGTCGATGGCGACGATGGCATCAACCATAGGCT
CTTGAAGCTGTCAGCAGGTAAATAACGCAGACCGAAAAAGTAGATTTATG
GAACGAATATGATAGACGTCTGACATGTTTTTACTGATGTAGAAAAAAAC
AACTATATCCTTTTTATACTTTTATTTAATTTTTTCATTATTTGCACATT
CATGCTCGTACGCTAATTGCAAGGGTACAAACAGTAAAAAATGTAACAAT
TGTCTATGCTATACATCTAACTAATATTTCTACATACATTACTGGGGGGT
TGACTTCTTTGGAGGAAGTGGCTCAAAAAGTGATTTTATCATTAATATTA
AGAGGCATTCCTACACTTCAATTGCAGAGCCACCGTGAGAATGCAAACTT
AGATATGTACACAAGGTAACTAGTTACTTAAGCAACTGGGACAATGTGAG
AATGTATTTCTAAATCAATCTAGAATGAGTAACTATAACATTATGAATCT
TATTACTTCGATGTCTAACTTTCACCGACATGTCAAACATGAAGAGTTCC
ATACCCACCATGCAAAAGTGTCACCCTGGCAAAGTGTCCCCTCATGCGAA
ATTGTCCGTACCCTCCATACAAAAAGGGCGATATACTGTATGTACCCGTG
CAAAAGTGTCCCGCTGGGGTCGTGTGGCGTAATAGCAGAGCGTTCGGTTC
AGAACCAAGAGGTTCCGAGTTCGAATCCTGCCCTGTCACCGATCTTGTGC
CCTTGGGACTTTCCTCACTCCACCCAGGTGTAAATGGGTACCTGACTTCG
GTTGGGGAAGGTCGTATTAAGGTCACCTGGTGGCGCCGAATGGCAGCCGC
CCAGACCCTTGCGACAGTTCCACGTATTGCAAGTGTGGACAAAATATGTA
TATGCATGTTGTGTATCATATAAAACCTGTAAACCCTGCATCAATTCAGC
ACTAGAAAGGCTGCCATTGCGGGTAATTTCTGACCAATAAAAATTGTTAT
TATATATATATATAAAAATGGCCCAATACAAAAATGTCCGTCAGAAAAGC
TGATATTTTTTTTCTCCATCTACCTTCAGACCACCAGTTGCTCTGGAGTG
TCGGTGAGGAGGGGGCCGGGCCCGGCCAGTTCCGGGTACCGCACAGTGTA
GACGTGGACAGGTTCGGGCAGGTGTGGGTGGCAGACAGAAGGAACCGGCG
GCTCCAGGTCTTCAGCGGACAGACGGGCAGCTACATCGGCGAGTGGACCC
TCAACGAGGATGTCTATGCAGTCAGGTAATTGTTACAACAAACATTCAAC
TCTCTTCCGATAGAATTTAGAAAAAAATTCAAATGACCGAATCTTTGTAC
CAGTTTTCTGGATGCTCAGCCCACGTCAGTTTCCGGAAGTGTGACGTGAC
CACCGGGTCAAAGGTGATTGGAAGTTTGTATCGGCCCCGTCTCTTATGAA
ATAAGTGTTTGTTTATGTCTAATACTTTCCAAAAGTCTGACGTGAGCACC
GGCGCAGGTCAAACGAAATTGGAAGTCTGTATCGGCCCCCGTCTCATAAA
GATGTCCGACAATGCGTAACACAAAAAACATACGGTTGTACACGACCCCG
TCGCCATTTCGCAGGACCGCTAGCCACTACATCTCTCTAGAGAATGTTGC
AAGTCCTCAAGCAAAAAATGTTGTCTCCAAGCTATAGGATGAAAGTGCCA
GATTCTTGGTAAGGTCAAAACTGATTCAAACATTGAAAGACGCTTAGGGG
GTAATATTTTTCTTGGTTGTAGGTTATTCGTTAAGCTAAAGCCTGGAACG
TTTGAAAAAATCTGAATTTGTCATTTAATAACAATTTTTCCATCTAAACT
TTCAGATTCAGCACAGACAAGTCCATTGTCTTTGTTCTCGAAGAATTGGT
TGGTGACCTTTTGATGTTGAAATCTCCGAACAAGCCCGGTTTCCTTGGCA
ACTACAAGTTGATTGACATTTTGCACATGCCGATCCCTGTCATTCCGCAC
ATGTTCTGTGTTAACCAGGTAACAGAGGCTGTCTTCATTGCTCAACTTGG
AGCTAAACGGTGTCAGAAATTCGTCCGAGGAAAAGGAAAGGCAAAGTGCT
GGCTTTCGCTTGTAATCGTATGTCGCGGGGGAAAACTTTGTGTGCAGATT
GTTGCAAGGAAAGCAAGTACAGAAATTTCTTCTATGGGGTGAAATTGTCC
ACTATGTCATCGAGCAGTACGGTTGCCTGATGCAACGTACGTAAGTCATG
TCCTGGCACCAGTGGCAAACACACACATATTCACACATTCGTACATTATA
CATTAAGTTGCACGACTTGAATATGCTGAACATCTGAGCGCGTACATTTA
CATGGGCCTGTTTCATTTGGTGTGACACTTACAAAATCTAAATGAAAAAA
AAAATAATAAAACGTTACACAACAGTGTTATCAACATCATAGAAAGCATT
AAATGTACAGGTGTTCCTGTTAGGCCAAAGCAAGTATTTTTTTATGGATG
ACANTAATAAAACATTACACAACAGTGTTATCAACATCATCGAAAGCATT
AAATGTACAGGTGTTCCTGTTAGGCCAAAGCAAGTATTTTTTTATGGATA
ACATCAGCGCTCTCATAATATTCGCCTGATGTCGACAAAAACACCTAGGC
GTTACATCAACAACTGGACTGAAGTGGGGTACCCATATTAACAAAGTAAC
AACTAAGGCTAAGCAGACGTTGGGAGTGATCAAACGTAATTTGTGGGCAT
GCCCAGCAAAGATAAAAGCACTTGCATACACGTCTCTAGTAAAACCAAAC
CTTGAATATGCTGCAACAGTATGGGATCCATACACAAAGAAAGACAAGGA
TAAACTGGAGAGGGTACAGAACCAAGCTGCCAGGTTCTGCACGAACAACT
ATGACAGGGGTGCTAGTGTCACTAAAATGAAAACAGATCTACAGTGGAAG
TCACCTGAAGACAGAAGAAAAATATCCAGGCTTTGCATGATGTACAAAAT
TACTAATAAACTTGTGGATGTACCGACTGATAATTATCTAATACCAGCCC
AGAAAAGGACAAGAAATAGTCATGCCTTTAAGTACCAGAGTTATCAACCA
AGGATTGATGTGTTCAAAAATTCGTATTTCCCGAGAACCATAGTAGAATG
GAACTCGTTGTCATCAGATGCTGTAGGAACACCTTCACTAAATAGCTTCA
AAGAACGATTGCAGTCAGATGTGCAAAAGTTAGGTGTGACAGGCCGTTCA
GTGTAACATAACCAGCTGCTGCCGTGCCGCGTGCCTGCGAAGCTGATGTG
TTACGCCGAAGGGCGGTTATACCGGCTATACAGATACAGATACAGATACA
GAAAAACACAATAAATTTCTTAGCCCTCCGACGGTGGTCAACATGCCCAA
AATTGGAAAATATGTCGTAAACGTTGACAGTCAAAGGTGTTTCATTGCAT
ATGAATACCCAGTGTAGTTCCTGCCCATGATGGTATGACAAGCTGTTTTC
TGCATTTGTTCTAGCAATGACATCATATACTGTCCTTGGTTCTAGTTAAT
TGAGCTGTGTACACAAGGTGTTTCATCGCATATGAAAACCCAGTGTACTT
GCTTCAGATGATGGTACAACAATCTCTTTTCTGCATTTGTTGTAGTTAGT
CTATTGATATGTATAGACATCTACAAGGACATGTTTACTGTTGAATAAAG
GAGTTTTATATTGTATATGAAACCTCATTGGTTGAATACAGGAATAAAAG
ACCTGTTG Coding sequence (CDS) from alignment at Sc0000136:529015..533022+ >Blg02007.5 ID=Blg02007.5|Name=Blg02007.5|organism=Branchiostoma lanceolatum|type=CDS|length=711bp|location=Sequence derived from alignment at Sc0000136:529015..533022+ (Branchiostoma lanceolatum)
ATGTTTGATCGTCATGGCAACCTTAAGGTGACACTTGGCACGCCGGGTGA
GAGAGGATCTAACCTTGACCCGTTACAGTTTGACCAAGTTTCGGACGTGG
CGTTCAGCTCTACGGGAGACATGTTCGTAGTCGATGGCGACGATGGCATC
AACCATAGGCTCTTGAAGCTGTCAGCAGACCACCAGTTGCTCTGGAGTGT
CGGTGAGGAGGGGGCCGGGCCCGGCCAGTTCCGGGTACCGCACAGTGTAG
ACGTGGACAGGTTCGGGCAGGTGTGGGTGGCAGACAGAAGGAACCGGCGG
CTCCAGGTCTTCAGCGGACAGACGGGCAGCTACATCGGCGAGTGGACCCT
CAACGAGGATGTCTATGCAGTCAGATTCAGCACAGACAAGTCCATTGTCT
TTGTTCTCGAAGAATTGGTTGGTGACCTTTTGATGTTGAAATCTCCGAAC
AAGCCCGGTTTCCTTGGCAACTACAAGTTGATTGACATTTTGCACATGCC
GATCCCTGTCATTCCGCACATGTTCTGTGTTAACCAGGTAACAGAGGCTG
TCTTCATTGCTCAACTTGGAGCTAAACGGTGTCAGAAATTCGTCCGAGGA
AAAGGAAAGGCAAAGTGCTGGCTTTCGCTTGTAATCGTATGTCGCGGGGG
AAAACTTTGTGTGCAGATTGTTGCAAGGAAAGCAAGTACAGAAATTTCTT
CTATGGGGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg02007.5-exon-Sc0000136-1570713199:529015..529331 | Blg02007.5-exon-Sc0000136-1570713199:529015..529331 | Branchiostoma lanceolatum | exon |
| Blg02007.5-exon-Sc0000136-1570713199:530344..530539 | Blg02007.5-exon-Sc0000136-1570713199:530344..530539 | Branchiostoma lanceolatum | exon |
| Blg02007.5-exon-Sc0000136-1570713199:531120..531737 | Blg02007.5-exon-Sc0000136-1570713199:531120..531737 | Branchiostoma lanceolatum | exon |
| Blg02007.5-exon-Sc0000136-1570713199:531838..533022 | Blg02007.5-exon-Sc0000136-1570713199:531838..533022 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000136 | genome | Sc0000136:529015..533022 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg02007 |
|
