|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000168:628582..636033+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01653.3 ID=Blg01653.3|Name=Blg01653.3|organism=Branchiostoma lanceolatum|type=mRNA|length=7452bp|location=Sequence derived from alignment at Sc0000168:628582..636033+ (Branchiostoma lanceolatum)
AATTCGTTGGCAACCGCTGCACTGTAACGTAACGTTACATTGTAACTGGT
AATTTCCTGTGATATGCAGGCAAGCAAGCCCATTAGTTCAGCACATGAAG
CTTGTGGTCGTAACGTTAAACGGCGGACCCCCCAAAAGACCCTCTAAATG
TCTATGCAGTGGGCCACCTACCTGTTGGCAATTGGCTTTCACTTTCGCCC
GCGCCAGTAGAGAAAACACAGACCATGGCGGACAGGAAAATGACAGAAAA
ACTCGACTTTGGCGAAGACAAAGGTCAACGGTGGGTACACTACTTTGTTG
AGAATGACATGATGTTACGTAGATGGTCATTTGATGTTATAAGAACTCAA
GTGTAGGTCTTTGGAGGGAAAATCCAACGGTATTCTGGCAGCACCGAAAT
GGCCGACATCATGAACTCAGAAAAACAATACTGCCAGGATACTATTTCCC
CACTCCGAAGATCTGTTTAAAGATGATTGATGATTACTTAGTACCGTAGT
TGGGAACTGACGTCTAATTGAACGAGTGACGAAGCCACAATGGTAGGGAG
GCGGGACAGCCTGTTTGGCGGGGTCGGGTGGACGGAGGGGGATGGGGCTG
GTTGGTAATATTGCCGTTCAATCCTAGCCTGTACCTATTCTCCAAGCAGA
GGTTTCGGTCGTGTGGGGTAGTAGTGGCCGGGTTTTTTTTACGTCTGTGT
CCCGTAACGGGAGGCAGACGTAAAAAAAAAACGGCCACTACGACCCCACC
GTGACGACCGAAACCTCTGCTTGGAGAATAGCCTCTACCAGGCTCCGCCC
GATCGCTGGGCCGGAACTTAGTAGTAGAAATCGGCCAAATAGGGTGAATA
GTATGCCAGGGGTAGTCCGCTATACAGGGTGTCCATCGCCTATTGAGCTT
CACTGCATAGCGGACTACCCCTGGCATACTATTCACTCTATTTGTACTAT
TTCTGTGCCGATTTCTACTATTTGGGCCCAGCGATCGGGCGGAGCCTGGT
AGAGGCTAGTTCAATCCCCGGCCACGACATTATTACATGTAAGTTAGATG
TTTTCTTTTCAATATCCATCTTTTATCATTCTAGATAATCATTCTTGCTC
AGGAGGGTAAACTAGTTTATTTCAACACCATTTTACAGGATCATCCTCAG
AGATAGACTTGGGGTTGATAATGTGTGGTGTAAATCACAAGATTGTCAAA
GGAACAATTTCCTGTCCATAGTGCGAAAAAAACTTATTTCCTGTCAAAAG
TGTAAGAAAAAAGTCTTATGATCAGGAACATCAGGCCTGTCAATAGTGCC
AAAAAATTGTCAACAGGAACATCCTGTCAATGGCCTCGATCAAATTGATA
GAAATGAAGGATTATTATCATTAGCACTAAGGTAATGTTCCAGACATTCA
TGAAAATTACTCCAATAGATTTACAAGTGACTTTCCCCCAAAAGCAATCT
TTTTAATTAGCTTCTTCTTGTAGATCAGGATGATGTCAAAGTATATGGAT
TTGACTGTACAGTAATGCCATTTTCATTATAGGCAGTGGAAGAATATCAT
AATTTCAGATGTTATGTCTGTCATGCGATGTCAATGTAGCAAATGTTTAT
TGTTCATTTGTTGCTATATACTTTTATTGCAGTTTTGACAAAGTGGAGTT
AGTGGACCATGCCTATCAAGAGCCAGTAGACCAGGAGCACCTAATGAGCG
GTGATCAGGGTCCTGATTACAAAAGCTATGGTGCATCTGGTCCTGAAGAT
ACTAGTTACTACACTGGTAATGAAATGTGGGTTCATGAAGACAAGGGCAC
ACCTAATGAGATTTTGGAAATAGACAAAGAGGTTAAAAACTTGAGGGTAT
CCAGTGGTGAAAAATTGGAAGCCTCAGCTCCTTTTGGGGATGTTGAAAAA
GAAGATTTTTCTGAAAATCATGAGGTACCGTGGGTCTCTGTCCAAGATCT
GGCCCCGGAGGTCTCTAGCAAAGATCTATATTGCTCATCCTCAAATTCCC
TTTTTGGATATAACCATGCAGAATGGAAACTAGATGAGCCAACGTTTCTC
AAGTACGCAGATGAGCAGTGCCTTAATAATCCTGAGAAGTGCAGAAGAGT
TACTCAGGGCTTGATATATAACAAAGAGGTTAGTAATCATGATAATACAT
CCCCAGGGGTTCATCTAAATCAGGAAAGAGGGGCGCTGCACCCTCTTGTT
TCAGCCCAGTACCCCCTTGTCGAATTCAGATTTTAGCGTAATATCCAGCA
TACAGCCTTCACTCAGCAATGGATTCTTCCATAAATACATAGAATCCGCT
ACCTCGCATGTGTGTGCTCCCTCTTGTTTAATTTTTCTAGAAAAAACCCT
GCATCCCACATGTGATTCTTTGTGTTCTTTTAATATCTTTACCATTTGCA
TGCAGTCAGTCATATTTGATGTGCTTATCCTTAAAAACACTTTGTTGTTT
TTCTTTGATTTTTGTGTGACCTAAGTGCTTTGTAATATGCATTTTGATTT
CTTAGTTACAGCATATTTTTATTTGCCAACATCACATAGATGAGCCCAAC
TAGCCACGAATACAGGAAAGGGAAAGAGTGGAGCTTAGGGGAATGGTTGG
GCAGTGGCACATTTGGAGCTGTGTATAAGTGTGAGTCACTAATGACAAGA
GCATATCCATATGCAGTGAAAAAGGTAATGTGAAAAAGGAAAGGTGTATC
ACAATATCATTATGAGATTCTGCCTTTTTTGTGTGATCAATTTGCAATGA
CAATTTTACTTGCTGCTGTTTGTTGTTTCACTCATAAAGGTAATCTTGAT
ACAATCTTGTGACAAAAATATAGATATCTTCTGCATATATAGAATCATGA
TCACCTTGGTTTGAATGCAGTATTAAATAGCTCAGGGGACACACTTGGTC
TGTCTGTATCTACCGTTATTTGTTGTATGTTTCCAGACATTTGTGGTCCG
CATACATAAAATCTGGATAGATAGTTGGTATGTGGGTACTTGTTGGGAAG
ACAAAGGTCAAGGTCAATTTCCCAGACTGGACTGCCAAAGAAGGTAGAGA
AGACCATAATTTACAATAGATTATTCTTGTTGCAGCCTTTTTTGCATGAT
TCAATGAGACAAGATGAACTAAGAAGTTAACAAAAGATAAAAATATTCCA
TGGATGTAAGATGTCTCCGAACACTTGTGTCATGTGGTGATTCCCCAGGT
TCCTACTACTAATCCTGATGGATGGGTAAGACTGGAGGAGATTGACCTGT
GGCAGAAGCTGGGCTGTCATCCCAATGTGTGTGAGCTGTATGGAGTGACA
TATGAAGAGGATGCATTTTGGTTCCACATGGAACTTGTTCAGTTTGGTCA
GTTTTGTATTCAGCATGGTTGAGTTGTTGTGCTTACTTACTTAGTAATAC
ATAGATATTGTTAGTTGATTGGAATCAAGCTTTGTAATCAGCCCATAACA
ATGGAAGAGTTGTCAGAATGGCATCTGTGGTGCATAGCATAGTTTGGCAG
ATTTGGAAGTAAGGGTGTATGATTCATGATTTTTGAAAAGTAGAACTTGA
ATAATTCAATTCTTTGAAACACTTTTTGACTTCAGCTGAGGATTCTGCAA
CAAGTCTATTCACATACGTGAGCACCCTGGAAACGCAGATCCCATTGGTG
GGTTTACTGAAGGCAGGAGGAGGGTTGTTTAAAGGAATTGACCACATGCA
CAAGCAGGAGACCACACATAGAGACATGAAAAATGGTACGTGACACTGAT
AATGTTTGTAGTTCCAAATGGAGTAAGGCCTAAAAAAATGTAAACAAGGT
CACTGAGTGTTTTGTAAGATATTTGCTGAGTTGGCAAAATGCTTATACAA
ATTCTTTATAATCAATGTCAATGACTTTTATTTCTTGTGCACTTATCAGC
TATGAAATGTTGTCTTTGTACTCAATTTCAGCCAAGAACGTCATGGTGAG
CACTGGTCTTAATCTTAAGATCATCGACTTCTCCTTCATCCGTACAGCCA
CTCAAGATGACCACTTTGATAAAGACCTGAAAGGAGGACTAGCCTGTTTT
TTCCAGCTGGTAACAGGAAAGAGGAAGGATCCAGACAACTGGACGGGTGA
TGCAGTGAAAGACTGCATCAAGGTAAGTAAATTTTCAAGACACAGCCTCA
CATCATACAGTTATAAAGATATTTGTATCTACCATTAGTGTATAGCATGT
TCTTCCGTGAAATCATTGCGGCAACAGAATATCACATGTAGTAGATAATG
GGCATATGACACTGAAATTCACAACAAGCAATGAATTCCTTAAGATTTTA
TTTATCTTTATATACAGAAATAGCATATACAATCTTTACTTCAATTACCT
TCAAAATTAACAATCGAACCATTTAATTTGGTTGGTTGGTTGGTTGGTTG
GTTGGTTGGATAGACTCACAAATTTGCTCAATCATCAAAGTACCTTACCA
TACTAATAAATGCACTTAAGGATAGACCATTATTTTGACAGCTAGCTGTC
CTGATATCTTAATTGTAAACACTATCTTATTAAAGTGTTCTTGTCTTTTC
TTTAATGCAGGACCATGACGATGTGGAAATGTTGCTGCCACTGTGCCAAA
CATTGATATCCCTTCTGAAATATGACAGCGGAAATGCAGATAAAGTGGCC
GGGTGGATGGCAGAAGAAATAAACAGACGGTGTACTAACCTTTTGCTGGA
AAAAAAAAGAGATTAAGCCTTAATTTATTGACAGGTTCAGATGCCATTAG
GGTAGCATTCATCTTGTCAAGGTTCCATCTGTACTTGTCATCTCCAAGGT
TTTGTATTTTACAATGTTTGACTTATAGTGGGAGACCTTTTCTTTTGATT
GCATCATTGTGTTCAATCTTTTTAAACATTGTATTATCATGATCAAATTT
TAATGCATCTGAAGAAAATGTAGACTTCAAGAAAAAATTATGTCATCTGA
CACTTTTGTTCTGTAGGGATTTGCATATTGTAAATATCTGATTCTATTGT
GACATTATGAGTTAAGTGATGCATTGAACGTTTGATTACATGATTAGAAA
TATTAATGGCACACCCTCATTACTATGAGCACTGTGTATCTTGTGAATAT
CGCAACTTTTATGAATTTTAAAATACAAATATTAGCTACTACTTAATTAG
ATATTGTTATGATACATTGTACTATTAGACTACAATTTTGATTGTAAAGC
ATGCCACTATGGCAAAAAAATATGTAAGCTATCATTAACTAGCATTTAGA
AGATTGTTGTTAGTGAACAGCAAATGGTCATAATTGTACGGCTGTATTAG
TCGATCAAGGCTGTCTAAGATTTGATATGTCATGGATTCTTCTGTATTTT
GTGTAGCAGGGCACAAATGTACTTATCAGCATTTCACTGCCACCAAATTC
AACTGATGTAGAAGGCATAGTCTGGCATTTTATCACCTGTTATCAAATGA
CCAAAAAATTGTACATTTTGGACTATTTGTACATTTTGATATGAAAAGGA
CATCACTGTCTAGATAAATGGAAACCTCTTTGATGGAATGTGTACATTAA
GAAGTCAGTGTGTTATGCAGTATTTGCACTGGTTTATTTGAAATACATAT
CTATTAATTATAATAATATCAGAAAATCTTTACTGAATTCTAAGGTCCTT
TTTATGAAGTGAATGGTAATTGATACGTCTGCTGGATACAGGTAGCATGC
TATATCCTGGTGTGTTCAACATATTCCTTGTAACATACCAGTAACACTAA
CAGAACTAAACTGTGTACTTTAGCTTTTTTAGCACTATAAGTATAACCAA
TACACTAGTAATGGATACAAACCTATATTTCATCCAATGAATAGAGTTTG
ACACAAAATAATTCAAGGTAAGAAAAAGTGGCACTACTAAAAACAGAAAA
ACTGTGTCAGGTGTCCAAATGCTGGCATTTCTCTGTGTCAACTTTCTCAC
CATTCCCGTTTTTTGTGACTTCGTGATCAGCCTTCAAAGTTTGTTGGACA
TCTTCAGTGTACTTTGTCTCAGCATCTGTCTGTATTTTTGATTGGCCTGT
TTTCTTTTCCTCAGATTCATTGTCATTACGAGCAGCAACCTTTTCTCCTG
TGTCTTCAGTCCTGCATTTCTTTCTTTGTGGACTTTCTACAGATGGGGTT
TTCCCATGAATCTCCACATGTCTCTTCCCATCATCCTTTGCTTCCTTGAT
ACCAACCTGCAGCTTGCCGTCATGCAGACCAAGTGTTTTCAAGCAGACAC
TGGCTGCAGCCTGTTCAGCAAGCTTTTTAGCCTTGTGCCTGTGGAGTAAT
CACACAAGTTTTATTATACTATACGTAAGTACAATAAATCAAAGGCTATG
GACATGGACAGAACAATTGGTAGAGTAGATATGCCAAAAATTTGGGATGT
AGATACATGTATAACAATGCCTAGCAAAATGAATCTTGTGTCTCCTGATA
TAGTCCTGAAAAAAATTGGATAGGAAGTGGGTAGGAGGGAATTCTCTTTT
TTTTCAGATCCAAGAAATACAGTTTTGTATGCAAAACTGAAATGCATCAG
CATACTGGTATCTTCAACCAAGGAGGTTTAATATTGAACCTCCTTGCTTC
AACATCATATCACAAATACATTGCAAAACAAACACCCATATTTAACAAGT
ACATGTATATCAAGGAAATGAACAAAGAATTACAATGTTTACTACTCATT
CTTACATTGACTGTTCAAAACCTTAATCTGTTAATAGAGTTTGCATCATT
CAAACTTAATGTCCCTTGCCAGCTGTCGACCAAAACAAAGGTTAGGGTTG
GCAGATTTTGCTAGCTATTAAGGGTCAGTCAGATAATTGGAAAACCAACA
TTGTTTTTCCTATTTACCTAGGCCCAAATTAAACTTTTATACAAAACGAC
AACTCACCAAAAACTGGATGCATATCTCTTATCATCCACCGTGACAACAG
AGTGGAATTTTGCATCAATTCCTTGCTTCACCTGCAAATATCATCACACA
ATATATATATATATATACATATATATAATAGTAACAATGATGGTGATGAT
GAGTAACAATGCAGAATATACATGAATATACAGAATGTCACAAGTTCAAT
AGCAGAGGGCAACTCATTTTTCAAACATTCGATTTCCTATTCGCTTTTAA
AATATTCCCAGCAACAGACTTTATTCTACCATTGAAATTTCAATAATAAA
TTTAGATATAGTTTTGGTTAGGCGCCACAAGTAACAAGACCAACACATAT
TTTGCTACTAATATTTTGCACTTGCAGAGAACATCTGTGGATTCGTTTAC
TAAAACGGTTCAGCACAAGAAAGAAAAAGACCTTACTGTTTCATAATTTG
GCTGAGGTAGATATTCCCTCCTACTCCAGTCCAGTAGGATAGTCTTGGGG
CTGACTGCAGAAGGGTACTCTTTCCTGGACAATAAAAGACCAATGTTTTC
TA Coding sequence (CDS) from alignment at Sc0000168:628582..636033+ >Blg01653.3 ID=Blg01653.3|Name=Blg01653.3|organism=Branchiostoma lanceolatum|type=CDS|length=1332bp|location=Sequence derived from alignment at Sc0000168:628582..636033+ (Branchiostoma lanceolatum)
ATGGCGGACAGGAAAATGACAGAAAAACTCGACTTTGGCGAAGACAAAGG
TCAACGTTTTGACAAAGTGGAGTTAGTGGACCATGCCTATCAAGAGCCAG
TAGACCAGGAGCACCTAATGAGCGGTGATCAGGGTCCTGATTACAAAAGC
TATGGTGCATCTGGTCCTGAAGATACTAGTTACTACACTGGTAATGAAAT
GTGGGTTCATGAAGACAAGGGCACACCTAATGAGATTTTGGAAATAGACA
AAGAGGTTAAAAACTTGAGGGTATCCAGTGGTGAAAAATTGGAAGCCTCA
GCTCCTTTTGGGGATGTTGAAAAAGAAGATTTTTCTGAAAATCATGAGGT
ACCGTGGGTCTCTGTCCAAGATCTGGCCCCGGAGGTCTCTAGCAAAGATC
TATATTGCTCATCCTCAAATTCCCTTTTTGGATATAACCATGCAGAATGG
AAACTAGATGAGCCAACGTTTCTCAAGTACGCAGATGAGCAGTGCCTTAA
TAATCCTGAGAAGTGCAGAAGAGTTACTCAGGGCTTGATATATAACAAAG
AGATGAGCCCAACTAGCCACGAATACAGGAAAGGGAAAGAGTGGAGCTTA
GGGGAATGGTTGGGCAGTGGCACATTTGGAGCTGTGTATAAGTGTGAGTC
ACTAATGACAAGAGCATATCCATATGCAGTGAAAAAGGTTCCTACTACTA
ATCCTGATGGATGGGTAAGACTGGAGGAGATTGACCTGTGGCAGAAGCTG
GGCTGTCATCCCAATGTGTGTGAGCTGTATGGAGTGACATATGAAGAGGA
TGCATTTTGGTTCCACATGGAACTTGTTCAGTTTGCTGAGGATTCTGCAA
CAAGTCTATTCACATACGTGAGCACCCTGGAAACGCAGATCCCATTGGTG
GGTTTACTGAAGGCAGGAGGAGGGTTGTTTAAAGGAATTGACCACATGCA
CAAGCAGGAGACCACACATAGAGACATGAAAAATGCCAAGAACGTCATGG
TGAGCACTGGTCTTAATCTTAAGATCATCGACTTCTCCTTCATCCGTACA
GCCACTCAAGATGACCACTTTGATAAAGACCTGAAAGGAGGACTAGCCTG
TTTTTTCCAGCTGGTAACAGGAAAGAGGAAGGATCCAGACAACTGGACGG
GTGATGCAGTGAAAGACTGCATCAAGGACCATGACGATGTGGAAATGTTG
CTGCCACTGTGCCAAACATTGATATCCCTTCTGAAATATGACAGCGGAAA
TGCAGATAAAGTGGCCGGGTGGATGGCAGAAGAAATAAACAGACGGTGTA
CTAACCTTTTGCTGGAAAAAAAAAGAGATTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01653.3-exon-Sc0000168-1570713199:628582..628861 | Blg01653.3-exon-Sc0000168-1570713199:628582..628861 | Branchiostoma lanceolatum | exon |
| Blg01653.3-exon-Sc0000168-1570713199:630214..630709 | Blg01653.3-exon-Sc0000168-1570713199:630214..630709 | Branchiostoma lanceolatum | exon |
| Blg01653.3-exon-Sc0000168-1570713199:631121..631255 | Blg01653.3-exon-Sc0000168-1570713199:631121..631255 | Branchiostoma lanceolatum | exon |
| Blg01653.3-exon-Sc0000168-1570713199:631780..631927 | Blg01653.3-exon-Sc0000168-1570713199:631780..631927 | Branchiostoma lanceolatum | exon |
| Blg01653.3-exon-Sc0000168-1570713199:632167..632316 | Blg01653.3-exon-Sc0000168-1570713199:632167..632316 | Branchiostoma lanceolatum | exon |
| Blg01653.3-exon-Sc0000168-1570713199:632513..632703 | Blg01653.3-exon-Sc0000168-1570713199:632513..632703 | Branchiostoma lanceolatum | exon |
| Blg01653.3-exon-Sc0000168-1570713199:633142..636033 | Blg01653.3-exon-Sc0000168-1570713199:633142..636033 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000168 | genome | Sc0000168:628582..636033 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01653 |
|
