|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000168:628738..636033+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01653.2 ID=Blg01653.2|Name=Blg01653.2|organism=Branchiostoma lanceolatum|type=mRNA|length=7296bp|location=Sequence derived from alignment at Sc0000168:628738..636033+ (Branchiostoma lanceolatum)
CAGTGGGCCACCTACCTGTTGGCAATTGGCTTTCACTTTCGCCCGCGCCA
GTAGAGAAAACACAGACCATGGCGGACAGGAAAATGACAGAAAAACTCGA
CTTTGGCGAAGACAAAGGTCAACGGTGGGTACACTACTTTGTTGAGAATG
ACATGATGTTACGTAGATGGTCATTTGATGTTATAAGAACTCAAGTGTAG
GTCTTTGGAGGGAAAATCCAACGGTATTCTGGCAGCACCGAAATGGCCGA
CATCATGAACTCAGAAAAACAATACTGCCAGGATACTATTTCCCCACTCC
GAAGATCTGTTTAAAGATGATTGATGATTACTTAGTACCGTAGTTGGGAA
CTGACGTCTAATTGAACGAGTGACGAAGCCACAATGGTAGGGAGGCGGGA
CAGCCTGTTTGGCGGGGTCGGGTGGACGGAGGGGGATGGGGCTGGTTGGT
AATATTGCCGTTCAATCCTAGCCTGTACCTATTCTCCAAGCAGAGGTTTC
GGTCGTGTGGGGTAGTAGTGGCCGGGTTTTTTTTACGTCTGTGTCCCGTA
ACGGGAGGCAGACGTAAAAAAAAAACGGCCACTACGACCCCACCGTGACG
ACCGAAACCTCTGCTTGGAGAATAGCCTCTACCAGGCTCCGCCCGATCGC
TGGGCCGGAACTTAGTAGTAGAAATCGGCCAAATAGGGTGAATAGTATGC
CAGGGGTAGTCCGCTATACAGGGTGTCCATCGCCTATTGAGCTTCACTGC
ATAGCGGACTACCCCTGGCATACTATTCACTCTATTTGTACTATTTCTGT
GCCGATTTCTACTATTTGGGCCCAGCGATCGGGCGGAGCCTGGTAGAGGC
TAGTTCAATCCCCGGCCACGACATTATTACATGTAAGTTAGATGTTTTCT
TTTCAATATCCATCTTTTATCATTCTAGATAATCATTCTTGCTCAGGAGG
GTAAACTAGTTTATTTCAACACCATTTTACAGGATCATCCTCAGAGATAG
ACTTGGGGTTGATAATGTGTGGTGTAAATCACAAGATTGTCAAAGGAACA
ATTTCCTGTCCATAGTGCGAAAAAAACTTATTTCCTGTCAAAAGTGTAAG
AAAAAAGTCTTATGATCAGGAACATCAGGCCTGTCAATAGTGCCAAAAAA
TTGTCAACAGGAACATCCTGTCAATGGCCTCGATCAAATTGATAGAAATG
AAGGATTATTATCATTAGCACTAAGGTAATGTTCCAGACATTCATGAAAA
TTACTCCAATAGATTTACAAGTGACTTTCCCCCAAAAGCAATCTTTTTAA
TTAGCTTCTTCTTGTAGATCAGGATGATGTCAAAGTATATGGATTTGACT
GTACAGTAATGCCATTTTCATTATAGGCAGTGGAAGAATATCATAATTTC
AGATGTTATGTCTGTCATGCGATGTCAATGTAGCAAATGTTTATTGTTCA
TTTGTTGCTATATACTTTTATTGCAGTTTTGACAAAGTGGAGTTAGTGGA
CCATGCCTATCAAGAGCCAGTAGACCAGGAGCACCTAATGAGCGGTGATC
AGGGTCCTGATTACAAAAGCTATGGTGCATCTGGTCCTGAAGATACTAGT
TACTACACTGGTAATGAAATGTGGGTTCATGAAGACAAGGGCACACCTAA
TGAGATTTTGGAAATAGACAAAGAGGTTAAAAACTTGAGGGTATCCAGTG
GTGAAAAATTGGAAGCCTCAGCTCCTTTTGGGGATGTTGAAAAAGAAGAT
TTTTCTGAAAATCATGAGGTACCGTGGGTCTCTGTCCAAGATCTGGCCCC
GGAGGTCTCTAGCAAAGATCTATATTGCTCATCCTCAAATTCCCTTTTTG
GATATAACCATGCAGAATGGAAACTAGATGAGCCAACGTTTCTCAAGTAC
GCAGATGAGCAGTGCCTTAATAATCCTGAGAAGTGCAGAAGAGTTACTCA
GGGCTTGATATATAACAAAGAGGTTAGTAATCATGATAATACATCCCCAG
GGGTTCATCTAAATCAGGAAAGAGGGGCGCTGCACCCTCTTGTTTCAGCC
CAGTACCCCCTTGTCGAATTCAGATTTTAGCGTAATATCCAGCATACAGC
CTTCACTCAGCAATGGATTCTTCCATAAATACATAGAATCCGCTACCTCG
CATGTGTGTGCTCCCTCTTGTTTAATTTTTCTAGAAAAAACCCTGCATCC
CACATGTGATTCTTTGTGTTCTTTTAATATCTTTACCATTTGCATGCAGT
CAGTCATATTTGATGTGCTTATCCTTAAAAACACTTTGTTGTTTTTCTTT
GATTTTTGTGTGACCTAAGTGCTTTGTAATATGCATTTTGATTTCTTAGT
TACAGCATATTTTTATTTGCCAACATCACATAGATGAGCCCAACTAGCCA
CGAATACAGGAAAGGGAAAGAGTGGAGCTTAGGGGAATGGTTGGGCAGTG
GCACATTTGGAGCTGTGTATAAGTGTGAGTCACTAATGACAAGAGCATAT
CCATATGCAGTGAAAAAGGTAATGTGAAAAAGGAAAGGTGTATCACAATA
TCATTATGAGATTCTGCCTTTTTTGTGTGATCAATTTGCAATGACAATTT
TACTTGCTGCTGTTTGTTGTTTCACTCATAAAGGTAATCTTGATACAATC
TTGTGACAAAAATATAGATATCTTCTGCATATATAGAATCATGATCACCT
TGGTTTGAATGCAGTATTAAATAGCTCAGGGGACACACTTGGTCTGTCTG
TATCTACCGTTATTTGTTGTATGTTTCCAGACATTTGTGGTCCGCATACA
TAAAATCTGGATAGATAGTTGGTATGTGGGTACTTGTTGGGAAGACAAAG
GTCAAGGTCAATTTCCCAGACTGGACTGCCAAAGAAGGTAGAGAAGACCA
TAATTTACAATAGATTATTCTTGTTGCAGCCTTTTTTGCATGATTCAATG
AGACAAGATGAACTAAGAAGTTAACAAAAGATAAAAATATTCCATGGATG
TAAGATGTCTCCGAACACTTGTGTCATGTGGTGATTCCCCAGGTTCCTAC
TACTAATCCTGATGGATGGGTAAGACTGGAGGAGATTGACCTGTGGCAGA
AGCTGGGCTGTCATCCCAATGTGTGTGAGCTGTATGGAGTGACATATGAA
GAGGATGCATTTTGGTTCCACATGGAACTTGTTCAGTTTGGTCAGTTTTG
TATTCAGCATGGTTGAGTTGTTGTGCTTACTTACTTAGTAATACATAGAT
ATTGTTAGTTGATTGGAATCAAGCTTTGTAATCAGCCCATAACAATGGAA
GAGTTGTCAGAATGGCATCTGTGGTGCATAGCATAGTTTGGCAGATTTGG
AAGTAAGGGTGTATGATTCATGATTTTTGAAAAGTAGAACTTGAATAATT
CAATTCTTTGAAACACTTTTTGACTTCAGCTGAGGATTCTGCAACAAGTC
TATTCACATACGTGAGCACCCTGGAAACGCAGATCCCATTGGTGGGTTTA
CTGAAGGCAGGAGGAGGGTTGTTTAAAGGAATTGACCACATGCACAAGCA
GGAGACCACACATAGAGACATGAAAAATGGTACGTGACACTGATAATGTT
TGTAGTTCCAAATGGAGTAAGGCCTAAAAAAATGTAAACAAGGTCACTGA
GTGTTTTGTAAGATATTTGCTGAGTTGGCAAAATGCTTATACAAATTCTT
TATAATCAATGTCAATGACTTTTATTTCTTGTGCACTTATCAGCTATGAA
ATGTTGTCTTTGTACTCAATTTCAGCCAAGAACGTCATGGTGAGCACTGG
TCTTAATCTTAAGATCATCGACTTCTCCTTCATCCGTACAGCCACTCAAG
ATGACCACTTTGATAAAGACCTGAAAGGAGGACTAGCCTGTTTTTTCCAG
CTGGTAACAGGAAAGAGGAAGGATCCAGACAACTGGACGGGTGATGCAGT
GAAAGACTGCATCAAGGTAAGTAAATTTTCAAGACACAGCCTCACATCAT
ACAGTTATAAAGATATTTGTATCTACCATTAGTGTATAGCATGTTCTTCC
GTGAAATCATTGCGGCAACAGAATATCACATGTAGTAGATAATGGGCATA
TGACACTGAAATTCACAACAAGCAATGAATTCCTTAAGATTTTATTTATC
TTTATATACAGAAATAGCATATACAATCTTTACTTCAATTACCTTCAAAA
TTAACAATCGAACCATTTAATTTGGTTGGTTGGTTGGTTGGTTGGTTGGT
TGGATAGACTCACAAATTTGCTCAATCATCAAAGTACCTTACCATACTAA
TAAATGCACTTAAGGATAGACCATTATTTTGACAGCTAGCTGTCCTGATA
TCTTAATTGTAAACACTATCTTATTAAAGTGTTCTTGTCTTTTCTTTAAT
GCAGGACCATGACGATGTGGAAATGTTGCTGCCACTGTGCCAAACATTGA
TATCCCTTCTGAAATATGACAGCGGAAATGCAGATAAAGTGGCCGGGTGG
ATGGCAGAAGAAATAAACAGACGGTGTACTAACCTTTTGCTGGAAAAAAA
AAGAGATTAAGCCTTAATTTATTGACAGGTTCAGATGCCATTAGGGTAGC
ATTCATCTTGTCAAGGTTCCATCTGTACTTGTCATCTCCAAGGTTTTGTA
TTTTACAATGTTTGACTTATAGTGGGAGACCTTTTCTTTTGATTGCATCA
TTGTGTTCAATCTTTTTAAACATTGTATTATCATGATCAAATTTTAATGC
ATCTGAAGAAAATGTAGACTTCAAGAAAAAATTATGTCATCTGACACTTT
TGTTCTGTAGGGATTTGCATATTGTAAATATCTGATTCTATTGTGACATT
ATGAGTTAAGTGATGCATTGAACGTTTGATTACATGATTAGAAATATTAA
TGGCACACCCTCATTACTATGAGCACTGTGTATCTTGTGAATATCGCAAC
TTTTATGAATTTTAAAATACAAATATTAGCTACTACTTAATTAGATATTG
TTATGATACATTGTACTATTAGACTACAATTTTGATTGTAAAGCATGCCA
CTATGGCAAAAAAATATGTAAGCTATCATTAACTAGCATTTAGAAGATTG
TTGTTAGTGAACAGCAAATGGTCATAATTGTACGGCTGTATTAGTCGATC
AAGGCTGTCTAAGATTTGATATGTCATGGATTCTTCTGTATTTTGTGTAG
CAGGGCACAAATGTACTTATCAGCATTTCACTGCCACCAAATTCAACTGA
TGTAGAAGGCATAGTCTGGCATTTTATCACCTGTTATCAAATGACCAAAA
AATTGTACATTTTGGACTATTTGTACATTTTGATATGAAAAGGACATCAC
TGTCTAGATAAATGGAAACCTCTTTGATGGAATGTGTACATTAAGAAGTC
AGTGTGTTATGCAGTATTTGCACTGGTTTATTTGAAATACATATCTATTA
ATTATAATAATATCAGAAAATCTTTACTGAATTCTAAGGTCCTTTTTATG
AAGTGAATGGTAATTGATACGTCTGCTGGATACAGGTAGCATGCTATATC
CTGGTGTGTTCAACATATTCCTTGTAACATACCAGTAACACTAACAGAAC
TAAACTGTGTACTTTAGCTTTTTTAGCACTATAAGTATAACCAATACACT
AGTAATGGATACAAACCTATATTTCATCCAATGAATAGAGTTTGACACAA
AATAATTCAAGGTAAGAAAAAGTGGCACTACTAAAAACAGAAAAACTGTG
TCAGGTGTCCAAATGCTGGCATTTCTCTGTGTCAACTTTCTCACCATTCC
CGTTTTTTGTGACTTCGTGATCAGCCTTCAAAGTTTGTTGGACATCTTCA
GTGTACTTTGTCTCAGCATCTGTCTGTATTTTTGATTGGCCTGTTTTCTT
TTCCTCAGATTCATTGTCATTACGAGCAGCAACCTTTTCTCCTGTGTCTT
CAGTCCTGCATTTCTTTCTTTGTGGACTTTCTACAGATGGGGTTTTCCCA
TGAATCTCCACATGTCTCTTCCCATCATCCTTTGCTTCCTTGATACCAAC
CTGCAGCTTGCCGTCATGCAGACCAAGTGTTTTCAAGCAGACACTGGCTG
CAGCCTGTTCAGCAAGCTTTTTAGCCTTGTGCCTGTGGAGTAATCACACA
AGTTTTATTATACTATACGTAAGTACAATAAATCAAAGGCTATGGACATG
GACAGAACAATTGGTAGAGTAGATATGCCAAAAATTTGGGATGTAGATAC
ATGTATAACAATGCCTAGCAAAATGAATCTTGTGTCTCCTGATATAGTCC
TGAAAAAAATTGGATAGGAAGTGGGTAGGAGGGAATTCTCTTTTTTTTCA
GATCCAAGAAATACAGTTTTGTATGCAAAACTGAAATGCATCAGCATACT
GGTATCTTCAACCAAGGAGGTTTAATATTGAACCTCCTTGCTTCAACATC
ATATCACAAATACATTGCAAAACAAACACCCATATTTAACAAGTACATGT
ATATCAAGGAAATGAACAAAGAATTACAATGTTTACTACTCATTCTTACA
TTGACTGTTCAAAACCTTAATCTGTTAATAGAGTTTGCATCATTCAAACT
TAATGTCCCTTGCCAGCTGTCGACCAAAACAAAGGTTAGGGTTGGCAGAT
TTTGCTAGCTATTAAGGGTCAGTCAGATAATTGGAAAACCAACATTGTTT
TTCCTATTTACCTAGGCCCAAATTAAACTTTTATACAAAACGACAACTCA
CCAAAAACTGGATGCATATCTCTTATCATCCACCGTGACAACAGAGTGGA
ATTTTGCATCAATTCCTTGCTTCACCTGCAAATATCATCACACAATATAT
ATATATATATACATATATATAATAGTAACAATGATGGTGATGATGAGTAA
CAATGCAGAATATACATGAATATACAGAATGTCACAAGTTCAATAGCAGA
GGGCAACTCATTTTTCAAACATTCGATTTCCTATTCGCTTTTAAAATATT
CCCAGCAACAGACTTTATTCTACCATTGAAATTTCAATAATAAATTTAGA
TATAGTTTTGGTTAGGCGCCACAAGTAACAAGACCAACACATATTTTGCT
ACTAATATTTTGCACTTGCAGAGAACATCTGTGGATTCGTTTACTAAAAC
GGTTCAGCACAAGAAAGAAAAAGACCTTACTGTTTCATAATTTGGCTGAG
GTAGATATTCCCTCCTACTCCAGTCCAGTAGGATAGTCTTGGGGCTGACT
GCAGAAGGGTACTCTTTCCTGGACAATAAAAGACCAATGTTTTCTA Coding sequence (CDS) from alignment at Sc0000168:628738..636033+ >Blg01653.2 ID=Blg01653.2|Name=Blg01653.2|organism=Branchiostoma lanceolatum|type=CDS|length=780bp|location=Sequence derived from alignment at Sc0000168:628738..636033+ (Branchiostoma lanceolatum)
ATGAGCCCAACTAGCCACGAATACAGGAAAGGGAAAGAGTGGAGCTTAGG
GGAATGGTTGGGCAGTGGCACATTTGGAGCTGTGTATAAGTGTGAGTCAC
TAATGACAAGAGCATATCCATATGCAGTGAAAAAGGTTCCTACTACTAAT
CCTGATGGATGGGTAAGACTGGAGGAGATTGACCTGTGGCAGAAGCTGGG
CTGTCATCCCAATGTGTGTGAGCTGTATGGAGTGACATATGAAGAGGATG
CATTTTGGTTCCACATGGAACTTGTTCAGTTTGCTGAGGATTCTGCAACA
AGTCTATTCACATACGTGAGCACCCTGGAAACGCAGATCCCATTGGTGGG
TTTACTGAAGGCAGGAGGAGGGTTGTTTAAAGGAATTGACCACATGCACA
AGCAGGAGACCACACATAGAGACATGAAAAATGCCAAGAACGTCATGGTG
AGCACTGGTCTTAATCTTAAGATCATCGACTTCTCCTTCATCCGTACAGC
CACTCAAGATGACCACTTTGATAAAGACCTGAAAGGAGGACTAGCCTGTT
TTTTCCAGCTGGTAACAGGAAAGAGGAAGGATCCAGACAACTGGACGGGT
GATGCAGTGAAAGACTGCATCAAGGACCATGACGATGTGGAAATGTTGCT
GCCACTGTGCCAAACATTGATATCCCTTCTGAAATATGACAGCGGAAATG
CAGATAAAGTGGCCGGGTGGATGGCAGAAGAAATAAACAGACGGTGTACT
AACCTTTTGCTGGAAAAAAAAAGAGATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01653.2-exon-Sc0000168-1570713199:628738..628861 | Blg01653.2-exon-Sc0000168-1570713199:628738..628861 | Branchiostoma lanceolatum | exon |
| Blg01653.2-exon-Sc0000168-1570713199:630214..630709 | Blg01653.2-exon-Sc0000168-1570713199:630214..630709 | Branchiostoma lanceolatum | exon |
| Blg01653.2-exon-Sc0000168-1570713199:631087..631255 | Blg01653.2-exon-Sc0000168-1570713199:631087..631255 | Branchiostoma lanceolatum | exon |
| Blg01653.2-exon-Sc0000168-1570713199:631780..631927 | Blg01653.2-exon-Sc0000168-1570713199:631780..631927 | Branchiostoma lanceolatum | exon |
| Blg01653.2-exon-Sc0000168-1570713199:632167..632316 | Blg01653.2-exon-Sc0000168-1570713199:632167..632316 | Branchiostoma lanceolatum | exon |
| Blg01653.2-exon-Sc0000168-1570713199:632513..632703 | Blg01653.2-exon-Sc0000168-1570713199:632513..632703 | Branchiostoma lanceolatum | exon |
| Blg01653.2-exon-Sc0000168-1570713199:633142..636033 | Blg01653.2-exon-Sc0000168-1570713199:633142..636033 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000168 | genome | Sc0000168:628738..636033 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01653 |
|
