Blg01259.0 (mRNA) - B. lanceolatum

Overview
NameBlg01259.0
Unique NameBlg01259.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000625:8819..11328+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01259.0 ID=Blg01259.0|Name=Blg01259.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2510bp|location=Sequence derived from alignment at Sc0000625:8819..11328+ (Branchiostoma lanceolatum)
GTGCTGGGGAGATTTCTGGTTCCACAGATTTAACTTCTACCGCGCAGTCT GGCGGTTTGATGGTCAAAACACCAACTATTGTGAGGTTTGAAATTAACGA TAGGACACTAGCGCTGGGGGAGACTCTCCATTTGGTCTGTGACGCTTCAG GTAAACCTAAGCCAGACATCACAGTCACCCTCCCATCTGGACTGAATGTA ACTGTTGAAACAGTTGGGAGGGTGACTGTGGGAGCGAATGGTACCATTAC CATAACTAACGTTACTACAGCAGATGCTGGTCAGTACATCTGTATTGCAA CCAATCTAGTTGGCTCTGCATATGAAAGGCTGTTCATTGAGGTAGAAACC CTAACATCGGTCATGCCAATTGTATCCACTGGTGCTGGGCAGATTTCTGG TTCCACAGATTTAACTTCTACTGCGCAGCCTGACGGTTTAATGGTCAAAA CACCAACTATTGTGAGGTTTGAAATTAACGATAGCACACTAGTGCAGGGG GAGACTCTCCATTTGGTCTGTGAAGCTTCAGGAATCCCCACACCAGACAT CACAGTCACCCTCCCATCTGGACTGAATGCAACTGTTGAATCAGGTGGGG GTGTGACTGTGGAGGTGAATGGCACCATTATCATAACTAATGTTACTACA GCAGATGCTGGGAAGTACATCTGTATGGCGTCAAATCCTGTCGGCTCGGC GTCAGCCACAGTGTTTGTTGATGTCCAAACCGCCGCGTCTGTTTCGCCTC CTTCTAATGTTTCAGCTCTAGTGTCAAGATCATATCCGCTTGGCAATTCA GAGGGCTATCTGCCAGCTGCTATTGGTGTTGGCCCTTGTGGTGGAATTCT ATTGGTTTCTGGTCTTGTCCTAGCATTTTGGTGGAGGCGAAAGACTAAAA ATGCCCCTGTAATCTCAGCACCGACAATTGATCCCCCCAATACAGACGAC AGGGTAAACAGCACCAACAATGACCCAGAAGATCAGGGTAGATCTTTAAA CCCAGAGATAGCAGGCAGCGCTGCAGGTCCAAACGGACAGGACAACATAC ATGAGCATGAATATGAGGACCCAGAATCGGCCATGTCCATGACATCGTGT ATTACAAAGATGTCTGATCCCGATGGTCCTGAGAACCAGCCCGGACCTCC TAGAGGTGCTGTAGGTCCAAAAGTAGAATCAGTTCGTGAACCCAAAGCCG AGTCAGTCCACAAGCCAGTAACAGTCCATGAACTAGTGAACATCGTGTAT GGGAAGGATAAGGCAGGTTTTGAGGCCGGGAAGGACAGTCCTATCCTTAA AGAGGAAGCCGCAGCTGCCACTTCCCATTTCAACCCTGATTACGACGATG AGAAGGGATCAGTACATGATACTCCTCAGGTCATCTATGAGAATACCAAA TTGAATAAAGATGAAGCAATGTTACATCCTTCTTCTCAGTTGGCGATTGG TTCATGAAAATAACAATGGGAAACCGGCACCTGCTACTTTTCATGTCATG AATACCGGTGAGGACGAAGCGGTGTTACATGCTTCCGCTCAGGTTATCTA CGGGAATGAAGCTGAAGACGTCGTAGCTTCTGTATCTCAATCCATCTACA AGAATGATAACAATAAACCAGAGTCCCTGGTTTCTCAGATTATTTATGGC AATGAAAATGAGAAATCTCAATCAATCTACAATGAGAAATCTCAATCAAT CTGCAATAATGGTATCTCATTAAGTCATTTATAGGAATGAAAACGAGAAA GCAGAGTCTGATGCATTTCAAACCATCTAGAATGTTCATAGTCTCTTCTT TCTCAAATCATTTATGGAAATGAAGCTGAGAAAGCAGAGTCTGGTCCATC CATCTACGAGAATAATAGTCAGAACCAAGAGTTTCCGGCTTCTTTGATTA CTTATGGCGATGGTGATGAAAAAACAGCAGCTACTGCTTCCGGGCTCATC GATGAGAATAATGATTAAGGACAAAATTGGCATAATGAATTCCTTGAAAG TTGAACGTGCCACAGAATAAACAGGTACCACCCAATGGAAACATAAAGAA TATAACTCGATACTGGAAATATATGTATACGTAGTAAATAAGCACGTAGA AATTATCGTTAGAGTATTGTGGGTAGAAAAGACAAGTGATTTCCATGTTT TTGATACCCGTTTGCTATGAATGAACGTCAAGTGGAAGACACTGGGTGGG TTTGCTATGGCTGGCGCACTTCCTCTCCTTATATATAATGATGTTTGAAT TTTGCTTTATGGCAAATTTAATACCAGGATTTTTGATCCATTATAACTAT TAATCATTGGGTGATGCCCATTATCATTAATCTAATAACAATAATAATGA TATATTCAATCCATATGTTAATTGCATATATTTGATTTATCTATAAATAA TTAATGAATGATATATTTGATGTAAGGATTATCAATTATATACTACTCTT AATAATTTATTGGTTATCTATCTTAGGTTCAAGGTGGTTGAGGATGTGAA GATGCAATGA

Coding sequence (CDS) from alignment at Sc0000625:8819..11328+

>Blg01259.0 ID=Blg01259.0|Name=Blg01259.0|organism=Branchiostoma lanceolatum|type=CDS|length=663bp|location=Sequence derived from alignment at Sc0000625:8819..11328+ (Branchiostoma lanceolatum)
ATGGTCAAAACACCAACTATTGTGAGGTTTGAAATTAACGATAGCACACT
AGTGCAGGGGGAGACTCTCCATTTGGTCTGTGAAGCTTCAGGAATCCCCA
CACCAGACATCACAGTCACCCTCCCATCTGGACTGAATGCAACTGTTGAA
TCAGACGACAGGGTAAACAGCACCAACAATGACCCAGAAGATCAGGGTAG
ATCTTTAAACCCAGAGATAGCAGGCAGCGCTGCAGGTCCAAACGGACAGG
ACAACATACATGAGCATGAATATGAGGACCCAGAATCGGCCATGTCCATG
ACATCGTGTATTACAAAGATGTCTGATCCCGATGGTCCTGAGAACCAGCC
CGGACCTCCTAGAGGTGCTGTAGGTCCAAAAGTAGAATCAGTTCGTGAAC
CCAAAGCCGAGTCAGTCCACAAGCCAGTAACAGTCCATGAACTAGTGAAC
ATCGTGTATGGGAAGGATAAGGCAGGTTTTGAGGCCGGGAAGGACAGTCC
TATCCTTAAAGAGGAAGCCGCAGCTGCCACTTCCCATTTCAACCCTGATT
ACGACGATGAGAAGGGATCAGTACATGATACTCCTCAGGTCATCTATGAG
AATACCAAATTGAATAAAGATGAAGCAATGTTCAAGGTGGTTGAGGATGT
GAAGATGCAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01259.0Blg01259.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01259.0-exon-Sc0000625-1570713199:8819..8903Blg01259.0-exon-Sc0000625-1570713199:8819..8903Branchiostoma lanceolatumexon
Blg01259.0-exon-Sc0000625-1570713199:9285..9412Blg01259.0-exon-Sc0000625-1570713199:9285..9412Branchiostoma lanceolatumexon
Blg01259.0-exon-Sc0000625-1570713199:9764..10238Blg01259.0-exon-Sc0000625-1570713199:9764..10238Branchiostoma lanceolatumexon
Blg01259.0-exon-Sc0000625-1570713199:11295..11328Blg01259.0-exon-Sc0000625-1570713199:11295..11328Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000625genomeSc0000625:8819..11328 +
Properties
Property NameValue
GeneIDBlg01259