Blg00928.0 (mRNA) - B. lanceolatum

Overview
NameBlg00928.0
Unique NameBlg00928.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000003:2400389..2404072-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00928.0 ID=Blg00928.0|Name=Blg00928.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3684bp|location=Sequence derived from alignment at Sc0000003:2400389..2404072- (Branchiostoma lanceolatum)
ATGGCGCCCTGGATGCTTCAAACTGTGGTCGTGTGTGCTGTTCTAGGTAT GTATTTGTTTGATTTGTATAGATAGTCAAAGTTAAGTGGTTGTATGCAAA CAATATGACTCTGACAAGTAGCTGTATATGAAAACATCACAAACCCAGTA ACTTTAAATCTGGATGTAAGCAACATGTCAACGTATAATACATATTGCTT CTTTGACTGCTCATTACTTAGAACGTCATTACGACACCTTTGTTAGTTCA GTTAGTTGCACCAATTGGTCTTGATAAAGTCGTAGTTAGGATTACTGTCC ATGTAAGCTGTAAGGGCATGTGACGTCACCAGGACAATATATAATAACAT CATCAGCTTACACAATAAAGTAGATGATACCAATGCCACCAATGCCATTG AACCTGACCGGGACAATGTCTTGCTAATATAAATGACAATAATATAGGAC CCATAATCGCGGATGAGATTGCTTTGATGTATATTTTATATATTGTATAG CACATGTAACTTTCCATGAACGTTTGGCTAACCCTGTAGTCCTTATACCC TTGACCCATACTGATAACGGTGGCCTTTGGTGCCGATTGTGTTTCAACGT GTTATGAATCATCCAACCCTGTCGTCATCGAAAACGTTGGGCTTTTTTAT TTATTTTACACTGCTTTCAAAGACGTAAAACCCCGCATTAGTATCGTAGA TATAGAACCTTATTGTAGACTAGCAACGTAGTTTACAATTAATTCTTCGC TTGTATCACATCTTATGCCTCATGTTTCACTTAATGTTTGTGTATCGTTG TTGATTGTTGTCAACTTGCAATTCGCCTACGGGCATGAATTCGCAATAAA CTGATAAAGACAGAAAAATCATATGTCTGATATACTTTTAAACAAGATAT ATTGTTTGAGAACTTGCCACAGAATTCCCGGAGAATAATACACTTCGTGA CTAAGAATTTACCCCCGCTGCACTAAATTACATGAACTACAGAACCCTTG AACCCATTTATAACCAAATATAACAACGCTCCTACCGATCTTTATGTGAA CTACATCTCTACGAGTACAAAGGAGTAGACCGTCTAGAAATAGACCTGTT CTTGACCTGGACAAAGTAGCAACTTTTCCAATGCTTTTTTTTGTTGTTTG CTAAGCCGACAGAGACAAAACTTGAACAGCTCACCGACAAAAATTCGTCA CGACAATGCTTGCAGGAGATCTCTTCATAAATATGTTAACGTTGCAACGC TACTTAGAGAACATTCTAGCTGCTCTTTGTTTGAATTGGTACATCTGTGT TACAACTCATGTTACAACTGTAATTGTTTGATTGACGCTTCCTTTTCCAG CTGCAGTTGTTGGAACAGGCAACTGCACAGCCGGATGCAGCTGTTCACAA GAGAGGGTGAGTTGTCCGACTGGATCATAAAAACTCTTTATGAAATTGCC CGAACAAGTACACTAGAACAATTTGATGTTTCGTACAAATGTCACATTTC TTCCCATGTTCATTCCTCGTCCGTATTGTGCTACAAGTACAGGGATATGT AAATTATTATGCATGTTGATACATTAAAAATACATGACTGATGAACGTAG AGTACTGAATGTGTTCGTGGTGCGTCCACCATTGAACGTGTCTACATCAA CAAGGAGGCATCACATCTGCTTAGAGACGCGTGGATCTAGGGCACACATT TGGTCGCATAAGCATATACTGTACAATGCAATGTACTATAAAGCCAAACC CAGCTGGTCAACGTACCGTACTGGATGTGTAGTGCGTCCACCACTCTACA TGTCTATCATCAACAAGAAGAGCCGATTCGTCACATCTGCCTAGAGATTT GTTGATACATTTGGTGGCATAAGCATGTACTGTACAAGTCAATGTAATGT AAATCATTGAGTCATATCATGCCAAATGCCATAGGAAATTTGTCAGTAAG GAAAGCCACACAGTTTTTCTAAGGGGTCAGAAAAAATCTTGCTTTAGTGG GTATTGACTCAGAACTTCCTTGTACCCAGCCATGTCCAAAGTGACGCCTT TTGTTTTTGGATGAGGTTCGTACCAGTGGTCTTCCTCAGCTCTGCACTCT CCAACTAAGCAGATAGTTGTGGAAAACTAGCTAGAATTGTACCTAGCCCG AGACCGTTTTGAACGACGTAGCTTTCGTTTTTTTTTGTTTGTTTTTTTAT ACTTCGGTTTAGGACAGACAAGAACGACGTGGCACTGCACTCAAGTTTTT CATAACTTATATTAACAGTGTCACGTACAGATAACAACATACCCATTTTT TTATATACACCTGGGCGAAGTGAGGAAAGTTGTGTAAAGTGCCTTTCCCA AGGGCACAACATCGGTGGCGTCAGGGGGATTCGAACTCGGGACCTCTTGG TTCTGAGTCGAACACCCTGCCGTTACGCCACACGACCCCACGTGCTTTCT TTGCACACCCGCATATAAATTTATAGTAACATAACACTGACGTCTAAACC CTACAGGTTGCCTTCACCCTGACGCGTGCCACCAACGAGGGCAGGATCAC CGGCTACAATGACGATCTGGTCGTGACGTTTGACCACGTCATCAGTGACG TAGGAGGAAGCTTCGCGGGAGAGAAGAACCCGTCCGTCTTCACGTGCGCG GTGCCTGGCGTGTACATGTTCAGGTGAGGCTTAGGTCACACTTGGAAAAA GAGGTCCCACCGGGCTCGTTTCTTGGCATTTTCAGGCCTAACCTGGGCTA TTTTGGGGCCCGGCCGGGACCCGCATTGACCTTTAACTCGGACTTAGATT CAACGCGAGACCCGGTAACAAACAGACGCCGTGAGCTAATCGTGAGGACC GGGAGGTAAAAAAACATAAAAATGTTATCAACTTTAAAGCTTTGAACAAA GATGTATAGAAGAAAGCCTCGTAAAGATAAAATTGGTATATATAATGGTA TTCATTTTGTTTACGTAGTTTTACAGCTCTGGCGCAGAAGCATCACTCTG CCTACATCAAACTGCTGAAGAACGGCGAGTTTCAGGTAATCAGAACCACC TTTCACTTTTTCTGTAACACATTCGGGACCTTCTCACGACTTCGCTCCCG ACCACTTCGCAAGGTCAGGAGTAGCATCGAATCCATACTACTCTCGCTCC AGTTTGCTCCTGAGACTGATTTAAGACAAACAGAAAATGAGTTTCACGAC TTTTAAGACGAGCTCCCAGCTACATGAGCTTGCTCAGTAACTCCCAACCG TGGTCTGGAGATGGTCAGTAGGCCATGGTTTGATATGTGTGATATATCCT TTCCGAATTACTAGAACTTCCCAACAAATGATAACTCAGAAGCCCCCCTA ACAAAAGTTAAACATTCTACCCAGCATGTTAGTCACGGAAACGTACCAAT TGTTTTGAGGATATCATGAGGGGTGTTGCCCTGTCTTACTGATATAACAC AACCTTCAACTGGTAAGACCTAGTTTTTATTTCCCATTTCTGGTTATGTT GCAGACGGCGTTGTGGGCGGGGCGTGTCCAGGGTAACCATGGCAGCGGCT CCAGTACCGCCGTCCTGCACCTGCGCACTGGAGACAGGGTGTGGCTGGCC ATCGGGTCGCCTGGATACTACGGGTTGCATAGCAACGAAAACCGCTTCAC CACATTCACGGGCGTTCTGCTATATCCCGACTAA

Coding sequence (CDS) from alignment at Sc0000003:2400389..2404072-

>Blg00928.0 ID=Blg00928.0|Name=Blg00928.0|organism=Branchiostoma lanceolatum|type=CDS|length=516bp|location=Sequence derived from alignment at Sc0000003:2400389..2404072- (Branchiostoma lanceolatum)
ATGGCGCCCTGGATGCTTCAAACTGTGGTCGTGTGTGCTGTTCTAGCTGC
AGTTGTTGGAACAGGCAACTGCACAGCCGGATGCAGCTGTTCACAAGAGA
GGGTTGCCTTCACCCTGACGCGTGCCACCAACGAGGGCAGGATCACCGGC
TACAATGACGATCTGGTCGTGACGTTTGACCACGTCATCAGTGACGTAGG
AGGAAGCTTCGCGGGAGAGAAGAACCCGTCCGTCTTCACGTGCGCGGTGC
CTGGCGTGTACATGTTCAGTTTTACAGCTCTGGCGCAGAAGCATCACTCT
GCCTACATCAAACTGCTGAAGAACGGCGAGTTTCAGACGGCGTTGTGGGC
GGGGCGTGTCCAGGGTAACCATGGCAGCGGCTCCAGTACCGCCGTCCTGC
ACCTGCGCACTGGAGACAGGGTGTGGCTGGCCATCGGGTCGCCTGGATAC
TACGGGTTGCATAGCAACGAAAACCGCTTCACCACATTCACGGGCGTTCT
GCTATATCCCGACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00928.0Blg00928.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00928.0-exon-Sc0000003-1570713199:2404027..2404072Blg00928.0-exon-Sc0000003-1570713199:2404027..2404072Branchiostoma lanceolatumexon
Blg00928.0-exon-Sc0000003-1570713199:2402667..2402722Blg00928.0-exon-Sc0000003-1570713199:2402667..2402722Branchiostoma lanceolatumexon
Blg00928.0-exon-Sc0000003-1570713199:2401400..2401566Blg00928.0-exon-Sc0000003-1570713199:2401400..2401566Branchiostoma lanceolatumexon
Blg00928.0-exon-Sc0000003-1570713199:2401038..2401104Blg00928.0-exon-Sc0000003-1570713199:2401038..2401104Branchiostoma lanceolatumexon
Blg00928.0-exon-Sc0000003-1570713199:2400389..2400568Blg00928.0-exon-Sc0000003-1570713199:2400389..2400568Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000003genomeSc0000003:2400389..2404072 -
Properties
Property NameValue
GeneIDBlg00928